Oncorhynchus gorbuscha (pink salmon): 124033841
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Entry
124033841 CDS
T07892
Name
(RefSeq) LOW QUALITY PROTEIN: B-cadherin-like
KO
K05689
cadherin 1, type 1, E-cadherin
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04371
Apelin signaling pathway
ogo04514
Cell adhesion molecules
ogo04520
Adherens junction
ogo05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
124033841
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
124033841
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
124033841
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
124033841
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ogo03036
]
124033841
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ogo04515
]
124033841
04090 CD molecules [BR:
ogo04090
]
124033841
Chromosome and associated proteins [BR:
ogo03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
124033841
Cell adhesion molecules [BR:
ogo04515
]
Cadherins
Major cadherins
124033841
CD molecules [BR:
ogo04090
]
Proteins
124033841
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_pro
Cadherin_4
DUF1366
Motif
Other DBs
NCBI-GeneID:
124033841
NCBI-ProteinID:
XP_046202164
LinkDB
All DBs
Position
LG04:complement(21706135..21719984)
Genome browser
AA seq
1065 aa
AA seq
DB search
MGAFWFVELGVLILFLQAFKPGLSEESKCLPGFNSEMYIFKVERNHLRSGRSLGKVVFDD
CTSRTSFLFHSEDSRFKVDGDGTLKLKRGRTLHNGRKEFYVSTQSKGKKVMVPVRVLHEA
RHGHHHNHHEMTTQPKLGESLSLPVLNIPKSSGGLKRMKRDWVIPPINIPENGRGPFPKN
MVQIKSSNDKEAKIQYSITGTGADLPPVGLFTVDKNSGILYVTQSLDREKKDQYILLAHA
VAVGAGIAEYPMEIIVKVIDMNDNKPVFTQDPFTGTVPEASKPGDEVMQVTATDADEEGS
ANSDVRYTILSQEPPLPSPNMFVINPVTGGIRVNAPGLDREKFTKYTLAIQAADMEGNGL
TSFSKAIITVTDSNDNAPQFVTPSYTVSVPENKVDALVVKMPVTDGDEPHSSAWATTYKI
VDGDPQGLFNVCTGPSKLEGTIMTVKPGESLSLPVLNIPKSSGGLKRRKRDWVIPPINIP
ENGRGPFPKNMVQIKSSNDKEVKTQYSITGTGADLPPVGLFTVDKNSGIFYVTQSLDREK
KDQYILLAHAVAVGAGIAEDPMEIIVNVIDMNDNKPVFTQDPFTGTVPEASKPSDEVMQV
TATDADEEGSANSDVRYTILSQEPPLPSPNMFVINPLTGGIRVNAPGLDREKIPKYTLAI
QAADMEGNGLTSFGKAIITVTDSNDNPSYTVSVSDIKVDLTDGDDPHSSTCSTTYKIVDG
DTQGLFSGSTGPSKLEGIITTAKPLDFEKNNKYTLLVTVQNEVPFAISLSTSTATVVVNV
EDVNEAPVFTPVEKIIRKPEDLPVDSDLVLYTATDPDTARNQKVTYKIRNDPAGWLSINK
NTGLIKVKSLMDRESTFVQDNKYSVIVLGIDNDEIPATGTGTLIIELEDVNDNAPTIDES
VIRVCNKESSPQLLSVTDKDSAGFAAPYTVQLQGSSHSNWTARMNDTKTGIILTLKTVLD
SGDYMVVLRVSDNQGLHHESTIQASVCDCKGADVQCTDEAVTGFGXSSILGILGAVLLLL
LLSLLLLLFLRKRGSEKEPQEDDVIYYYDEEGGGEDDQVKGDSPD
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atgggggcattttggtttgtggagctgggcgtattaatattatttctccaggctttcaaa
ccagggttgtcggaggagtcaaaatgtcttccaggtttcaattcagaaatgtacattttc
aaagtggaaagaaatcacttacgaagtggccggagtcttggaaaagtggtttttgacgac
tgcaccagccgtaccagctttctctttcactccgaggattcacgcttcaaagtagatggc
gacgggacgctgaaactgaagagggggcggactctgcataatggacgtaaggagttctat
gtctctacccagtccaagggcaagaaggtcatggttccagtcagagtgctgcatgaggcc
agacatggccaccaccacaatcaccatgagatgaccacccagcccaagctaggagaaagt
ctgtctctacctgttctgaacatccccaagtcttcaggaggtctgaaaagaatgaagagg
gactgggtcattcctcccatcaacatcccagagaatggccgaggcccgttccccaagaat
atggtgcagatcaagtccagcaatgataaagaggcgaagatccagtacagcatcactggc
actggggcagacctacctcctgtgggactcttcactgtggacaaaaactctggaatactc
tatgtgacccagtctttggacagggagaaaaaagaccaatacattctcctagcccatgct
gttgcagtgggtgcaggtatagctgagtatcccatggagatcattgtgaaagtcatcgat
atgaatgacaacaaacctgtatttacccaagatccatttacgggaacagttcctgaagca
tcaaaaccaggtgatgaggtcatgcaggtaacggccactgatgctgatgaggagggctct
gccaattctgatgtcagatacaccattctcagtcaggagcctccactaccaagccccaac
atgtttgtcatcaaccctgtgactggagggattcgggttaacgcacctgggttggacaga
gagaaatttaccaaatatactttggcaatccaagctgccgatatggagggaaatggcctt
accagctttagcaaagccatcattacagtaacggacagcaatgacaacgcgccacagttt
gtgaccccttcgtacactgtgtcagtcccagagaataaagtggatgccttggtggtgaaa
atgccagtgactgatggagatgagcctcactcctctgcctgggccaccacctacaagata
gttgacggggaccctcaaggccttttcaatgtgtgcacaggccctagcaagctggagggc
accattatgacagtaaaacctggagaaagtctgtctctacctgttctgaacatccccaag
tcttcaggaggtctgaaaagaaggaagagggactgggtcattcctcccatcaacatccca
gagaatggccgaggcccgttccccaagaatatggtgcagatcaagtccagcaatgataaa
gaggtgaagacccagtacagcatcactggcactggggcagacctacctcctgtgggactc
ttcactgtggacaaaaactctggaatattctatgtgacccagtctttggacagggagaaa
aaagaccaatacattctcctagcccatgctgttgcagtgggtgcaggtatagctgaggat
cccatggagatcattgtgaatgtcatcgatatgaatgacaacaaacctgtatttacccaa
gatccatttacgggaacagttcctgaagcatcaaaaccaagtgatgaggtcatgcaggta
acggccactgatgctgatgaggagggctctgccaattctgatgtcagatacaccattctc
agtcaggagcctccactaccaagccccaacatgtttgtcatcaaccctttgactggaggg
attcgggttaacgcacctgggttggacagagagaaaattcccaaatatactttggcaatc
caagctgctgatatggagggaaatggccttaccagctttggcaaagccatcattacagta
acggacagcaatgacaacccttcgtacaccgtgtcagtctcagatattaaagtggatttg
actgatggagatgatcctcactcctctacctgttccaccacctacaagatagttgacggg
gacactcaaggccttttcagtgggagcacaggccctagcaagctggagggcatcattaca
acagctaagccgcttgactttgagaagaacaacaagtacactctgctggtcactgtgcag
aatgaagtcccattcgcaatcagcctgtccacctccactgctactgttgtagtgaatgtg
gaggatgtgaatgaagctccagtcttcaccccagtggagaagattatcaggaaacctgag
gacctccctgttgacagtgacctggttctgtacaccgccacggacccagacactgcaagg
aatcagaaagtcacatacaagatacgcaatgatcctgctggatggctaagtatcaacaaa
aacactgggctgatcaaagtcaagagcctcatggacagagaatccacttttgtccaagac
aacaaatactcggttattgttctgggcatcgacaacgatgaaatcccggcaactggcact
ggcacccttatcatagagctggaggatgtgaatgataatgctccaaccatcgacgagagt
gtgatcagggtctgcaacaaggagtcctccccacagctgctgtcagtcactgataaagac
agcgcgggctttgctgctccttacaccgtacagcttcaggggtcgtctcattctaactgg
actgccagaatgaatgacacaaagactggcattatcctgacactgaagactgtgttggac
agtggagattacatggttgtcctgagagtgtctgacaaccagggcctgcaccatgaaagc
accatccaggcctccgtgtgtgactgcaaaggagcggatgttcagtgcaccgatgaagct
gtaacaggcttcgggncctctagcattctgggaattctaggagcagtcttactactccta
ttgttgtctcttctgctgctcctgttcctgcgaaagagaggtagtgagaaggagcctcag
gaggacgatgtcatctactactatgacgaggagggaggtggtgaggatgaccaggtgaaa
ggggactcaccagactag
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