Oncorhynchus gorbuscha (pink salmon): 124033842
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Entry
124033842 CDS
T07892
Name
(RefSeq) B-cadherin-like
KO
K05689
cadherin 1, type 1, E-cadherin
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04371
Apelin signaling pathway
ogo04514
Cell adhesion molecules
ogo04520
Adherens junction
ogo05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
124033842
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
124033842
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
124033842
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
124033842
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ogo03036
]
124033842
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ogo04515
]
124033842
04090 CD molecules [BR:
ogo04090
]
124033842
Chromosome and associated proteins [BR:
ogo03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
124033842
Cell adhesion molecules [BR:
ogo04515
]
Cadherins
Major cadherins
124033842
CD molecules [BR:
ogo04090
]
Proteins
124033842
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
Cadherin_4
DUF1366
BACON_2
Motif
Other DBs
NCBI-GeneID:
124033842
NCBI-ProteinID:
XP_046202165
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All DBs
Position
LG04:complement(21660460..21678119)
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AA seq
881 aa
AA seq
DB search
MGAFWFVELGVLILFLQAFRPGSSESKCLPGFNSEMYIFKVERYHLQSGRRLGKVVFDDC
TSRTSFLFHSEDSRFKVDGDGTLKLKRGLTLHNGHKEFYVSTQSKGKKIMVPVRVLHEAR
HGHHHNHHEMTTQPKPGESLSLPVLNFPKSSGGLKRRKRDWVIPPINFPENDRGPFPKNM
VQIKSSNDKEVKIQYSITGTGADLPPVGLFTVDKNSGILYVTQPLDREKKDKYILLAHAV
AVGAGIAEDPMEIIVKVIDMNDNKPVFTQDPFTGTVPEASKPGDEVMQVTATDADEEGSA
NSDVRYTILSQEPPLPSPNMFVINPVTGGIRVNAPGLDREKFTKYTLAIQAADMEGNGLT
SFGKAIITVTDSNDNAPQFVTPSYTVSVPENKVDALVVKMPVTDGDEPHSSAWATTYKIV
DGDPQGLFSVSTGPSKLEGIITTAKPLDFEKNNKYTLLVTVQNEVPFAISLSTSTATVVV
NVEDVNEAPVFTPVEKIIRKPEDLPVDSDLVLYTATDPDTARNQKVTYKIRNDPAGWLSI
NKDTGLIKVKSLMDRESTFVQDNKYSVIVLGIDNDEIPATGTGTLIIELEDVNDNAPTID
ESVIRVCNKESSPQLLSVTDKDSAGFAAPYTVQLQGSSHSNWTARMNDTKTGIILTLKTV
LDSGDYMVVLRVSDNQGLHYDSTIQASVCDCKGADVQCSDKAVAGFGISSILGILGAVLL
LLLLSLLLLMFLRKRGGEKKEPLLQEDDVRDNIYYYDEEGGGEDDQDFDLSVLHRGLDNR
PDVFRNDIAPTMARPEYRPRPANPADIGNFIDDNLKAADNDPTAPPYDSLLVFDYEGGGS
EAGSLSSLNSSNSGGDQDYDLLQEWGPRFKKLSDMYGGGED
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atgggggcattttggttcgtggagttgggcgtattaatattatttctccaggctttcaga
ccagggtcgtcggagtcaaaatgtctaccaggtttcaattcagaaatgtacattttcaaa
gtggaaagatatcacttacaaagtggccggagactaggaaaagtggtttttgatgactgc
accagccgtaccagctttctctttcactctgaggattcacgcttcaaagtagatggcgac
gggacgctgaaactgaagagggggctgactctgcataatggacataaggagttctatgtc
tctacccaatccaagggcaagaagatcatggttccagtcagagtgctgcatgaggccaga
catggccaccaccacaatcaccatgagatgaccacccagcccaagccaggagaaagtctg
tctctacctgttctgaacttccccaagtcttcaggaggtctgaaaagaaggaagagggac
tgggtcattcctcccatcaacttcccagagaatgaccgaggcccgttccccaagaatatg
gtgcagatcaagtccagcaatgataaagaggtgaagatccagtacagcatcactggcact
ggggcagacctacctcctgtgggactcttcactgtggacaaaaactctggaatactctat
gtgacccagcctttggacagggagaaaaaagacaaatacattctcctagcccatgctgtt
gcagtgggtgcaggtatagctgaggatcccatggagatcattgtgaaagtcatcgatatg
aatgacaacaaacctgtatttacccaagatccatttacgggaacagttcctgaagcatca
aaaccaggtgatgaggtcatgcaggtaacggccactgatgctgatgaggagggctctgcc
aattctgatgtcagatacaccattctcagtcaggagcctccactaccaagccccaacatg
tttgtcatcaaccctgtgactggagggattcgggttaacgcacctgggttggacagagag
aaatttaccaaatatactttggcaatccaagctgccgatatggagggaaatggccttacc
agctttggcaaagccatcattacagtaacggacagcaatgacaatgcgccacagtttgtg
actccttcgtacactgtgtcagtcccagagaataaagtggatgccttggtggtgaaaatg
ccagtgactgatggagatgagcctcactcctctgcatgggccaccacctacaagatagtt
gacggggaccctcaaggccttttcagtgtgagcacaggccctagcaagctggagggcatc
attacaacagctaagccgcttgactttgagaagaacaacaagtacactctgctggtcact
gtgcagaatgaagtcccattcgcaatcagcctgtccacctccactgctactgttgtagtg
aatgtggaggatgtgaatgaagctccagtcttcaccccagtggagaagattatcaggaaa
cctgaggacctccctgttgacagtgacctggttctgtacaccgccacggacccagacact
gcaaggaatcagaaagtcacatacaagatacgcaatgatcctgctggatggctaagtatc
aacaaagacactgggctgatcaaagtcaagagcctcatggacagagaatccacttttgtc
caagacaacaaatactctgttattgttctgggcatcgacaacgatgaaatcccggcaact
ggcactggcacccttatcatagagctggaggatgtgaatgataatgctccaaccatcgac
gagagtgtgatcagggtctgcaacaaggagtcctccccacagctgctgtcagtcactgat
aaagacagcgcgggctttgctgctccttacaccgtacagcttcaggggtcgtctcattct
aactggactgccagaatgaatgacacaaagactggcattatcctgacactgaagactgtg
ttggacagtggagattacatggttgtcctgagagtgtctgacaaccagggcctgcactat
gacagcaccatccaggcctctgtgtgtgactgcaaaggagcagatgtccagtgttccgat
aaagctgtagcaggcttcggcatctctagcattctgggaattctaggagcagtcttacta
ctcctattgttgtctcttctgctgctcatgttcctgcggaagagaggtggtgagaagaag
gagcctctgctgcaagaggacgatgtcagggacaacatctactactatgacgaggaggga
ggtggcgaggatgaccaggatttcgacttgagtgtcctgcacagaggtctggataaccgt
cctgatgttttccgtaatgacatcgctccaaccatggcccggccagagtatcgtccacga
cccgccaacccagccgacattggcaacttcattgatgataacctgaaggcagctgacaac
gaccccactgcccctccctacgactccctcctggtgtttgactatgaaggaggtggctct
gaggccggttccctcagttccctcaactcctccaactcaggaggcgaccaggactacgac
ctccttcaagagtggggcccgcgcttcaagaagctgtctgacatgtacggaggaggagag
gattga
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