Oncorhynchus gorbuscha (pink salmon): 124033879
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Entry
124033879 CDS
T07892
Name
(RefSeq) neural-cadherin-like
KO
K27892
neural-cadherin
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ogo04515
]
124033879
Cell adhesion molecules [BR:
ogo04515
]
Cadherins
Cadherin related
124033879
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Laminin_G_2
Laminin_G_1
Ig_Shg
Cadherin_CELSR2_9th
CADH_Y-type_LIR
Cadherin_pro
EGF
Fibulin_C
Cadherin_2
hEGF
Big_9
EGF_Teneurin
Laminin_G_3
Y_Y_Y
Motif
Other DBs
NCBI-GeneID:
124033879
NCBI-ProteinID:
XP_046202219
LinkDB
All DBs
Position
LG04:complement(25181154..25402612)
Genome browser
AA seq
2897 aa
AA seq
DB search
MIWTILICYFVTSVLGNKTEERIPFFHGHVFENSEPGSKVNGLSIPVKRVDAQRWCSNSG
MHLKLLGDGSEDFRVFAHHKRGHILLKTSIILDREERSEYLLSLGLCCQSCAVNDHVVAE
VASVKVDVLDTNDHEPTFPNVDIKISLDDATALRSVVYKVTAEDTDSGKNAELIYFALPK
NGSFYVVPKTGDVLLVDSILGLTAPIKFNVFAMDHGWPSRTSQSIDIEINPRQWPAVPRP
SHGEPNSRQPRKSRSLLESSEPIVLNVSEDASIGSVVMNLYPVRFQAASFELMDPGVDSS
PVTVSRDSGDIVITRRLDRETEPLVEITVKVQDKRGPDWYLVRLELTVTDVNDNVPEWTM
VPSPYLAVVSPNALAGSLVYKLHAQDGDEGNNGEVEYFLSDGGDGRFEVDRKSGHVRTTG
LPLQRDKEYLLTVVAADRLGSRSPPVVVSVIAGARAPQFSNASFIISLPENTPEGQPFLA
TPAVSFQKQPISYSLLINPSSLFSMQADTGEITLTRTIDFEMDQHSFLLMVRASEDQNSL
SSAAEVRVIITDENDCVPEFLQSIYSKDSVPETVTTATSLLQVSASDCDSDLNAELSYYT
LSPDFSISPHGTIFPAGQLDYERPNHLYEFVVMAVDKGDVPRTGTATVRIRMANVNDEVP
EFSQHVYRTFVSEDAGPNTLVATVLAKDPDGDGITYRITTGNDEGNFVIDSQKGLIRLRS
SPPPRLQGVEYVLNVTATDDNASGGPQALSSTAQVIVGVDDVNNNKPVFEKCQQYRERTT
VLENQPAGAFVLQVHAVDADEGSNGRVTYGFMHKDSTVPAFSIHPDTGAIVTSRKFDRER
QREYAVTVTATDQAADPLIGICQLNILILDENDNSPKFENLRYEYFLREDTMIGTSFLRV
AAHDDDYSTNAAVTYSMSKEQPEYLRVNPLTGWVYVNQPISQRTYITREIVATDGGNRSS
SVELSVTITNVKNQPPQWDRDSYDVVIPENTVRDTPIVTIKATSPLGDPRVTYNLEDGMV
PETNMPVRFYLTPNREDGSASILVAEPLDYETTRNFILRVRAQNVAAVPLAAFTTVHLNI
TDVNDNVPFFTSSIYEASVTEGAEVGTFVTQVSSNDLDLGLNGKISYSLLKDRSGDYQYF
RIDPELGSIYTEAVFDRETKGSYLLEVKSVDGWESARPGKHGQPNSDTAYVRVFISDVND
NKPVFAQTVYEVDVDEDADVGFAILTVSANDEDEGANAKLRYQITSGNTGGVFDVEPEVG
TIFIAQPLDYERNKGYKLLVLASDGKWEDYADVMVNMVNKNDEAPVFTVNEYYGSVTEEL
DGSPVFVLQVTATDPDKDADQEALRYSLHGQGAESQFIIDEVTGKIYAQRTLNREERAVW
RFVVLATDEGGEGLTGFTDVIINVWDINDNAPVFTCAPDCHGNVPENSAPGTSVMEMTAT
DLDDSAVGQNAVLSYRIVGDTGTGGSGSDMFSINPSTGTVSVAMSGLDREQAEAYLLVVE
ARDGGGMMGTGTATIRVTDVNDHAPRFTERSCLARVPESSEPNAVVLEMSAEDWDTGENA
QLTFSVVAGDPEQKFSMVSHRQEQRGTLRLKKRLDYERTSEQRFNLTLKVEDLDFSSFIH
CIIEVEDCNDHTPIFIALSQPPAPLAEDVPVGSSVARLTASDSDSGQNKKITYKILQESD
ILGQFSVDQSGLVTVTSALDRETAAQHHLVVLASDHGSPALTGSTVIQLTLLDVNDNGPE
FEAVYTPVVWENIAGPQLVRLNQTSTLLRAVDRDSAENGSPFYFSLPLELNHSNDFYLQD
NGNGTATITALRAFDRERQKEFHLQIIMSDSGHPPKTVTNTLTITIGDENDHAHQAGEKE
IFVNSHRGRMPTTVLGKVYAPDPDDWDNKTYAFEGHVPNYFLLNKRTGFLIIKENAPPGS
YEFQVRVSDGVWPDAVSGVTVNVRELRDEAIYNSGSLRLADITAKDFIEQRGSLRSRYEL
LVDFLSEMLSVGIDDINVFSLTDVRERTLDVRFAVHSSPFLRAERLQGYLAAHKQKLQSF
LQVNVSQVHVDECANTDCGGSGGCSNVLSVSDTPTVVDSGSMSLVSVTVESTAVCSCSGR
EHVHKICSSYPRNPCFNGGICVDTPSGYRCQCPTQFEGPECQQTKHSFHGNGYAWFPPIR
PCFESHLSLEFITEVADGLLLYSGPLAQLQPWDLEDFMAIELIDGTPTLKINHGSGTLVL
QLPGNVNVADRRWHRLDVRSNSKEVRFTLDRCAGATVMEMEGVGSWLTTEDHSSCEVTGV
TPNLDRHLNGTQVLQLGGVNEDLPYVYPQLQHKHFTGCIRNLVVDSKFYDLGNPADSVGS
SPGCLTTDGSCVNVGIPSCGPRGRCHGEWGSFSCQCIPGYTGTQCEQEVPEFSFDGRSHV
HYQLASPLPTRRTQAQVLVRTRKHGSAILSLLSKEQTEYLRLEIYQGLLAVFYNLGDGDY
NLTLPSYRLDNGEWHEVYLDRHDNELTLRLDGGGGRREASAAPGRSREIITDPTLVMLGN
AFPSGSNKSFQGCMRDLRLNGRYVPLDGQSRDGISVVSSQGLSVGCSSDSCKRNQCSPPF
TCVDLWRVHECRCPPGHMVKVNGTGKFCVYTLCASRPCHRGTCVAQSPSKFTCHCLEGYR
GRHCEVALAIYRDDVGLSFSSLFAICICFMALLVLLLGIFLYTRWRSYKGLKEGVYHVSA
HHDGWEDIRENVLNYDEEGGGEEDQNAYDMAELQKSLQPSPAQSVQYSRSRAIHQHHHTQ
HQHPQPQDTLSRLGANTALSSFTTTLRRDVPPTRTPAQGQSRPLLLARKSLSFSSQDLAR
YLCEIIRDADQAPETAPFDSLQVFSTEGGGSLAGSLSSFSSAGLEEDTARGQDSLKDWGP
RFEKLKALYEKTEASDL
NT seq
8694 nt
NT seq
+upstream
nt +downstream
nt
atgatttggactattttgatatgctatttcgtgacatctgtacttgggaataagacagag
gaaaggataccgttctttcatggacatgtattcgagaactccgagcctggatccaaagta
aacggtctcagcatccctgtgaagcgagttgacgcgcagagatggtgctccaactccggc
atgcatctgaaactcttgggagatggaagtgaagatttccgggtatttgcccaccacaaa
cgcggacacatacttctgaaaacctcgatcatcctggacagagaggagcgctccgagtac
ctgctcagcctgggtctgtgctgccaaagctgcgccgttaatgaccatgtggtcgcagaa
gttgcatctgtgaaagtggatgttttggacactaatgaccacgagccaacattccctaat
gttgatataaaaattagtctagacgacgccactgctctgcggtctgtggtgtataaagtg
accgcggaggatacagacagcgggaaaaacgctgaactaatttactttgctcttcccaaa
aatggcagtttttatgtggttccaaaaactggagatgtactgcttgtggactctatattg
ggtcttaccgcgcccataaagtttaacgtgtttgcgatggaccacggctggccctcgcgg
accagtcagagtattgacatcgagattaatccccggcaatggccagcggttccacggcca
tcccatggtgaaccgaatagcagacaacctcggaagtcgaggtccctgctagagtcgagc
gagccgatcgtactaaatgtttccgaggatgccagtatcggttctgtagtaatgaacttg
tacccggtgaggtttcaggctgccagctttgagttgatggatcccggtgtggacagctca
ccggtcacggtgagtcgggacagcggagatatagttattacacggcgcctggaccgggag
acggaacctctcgtggagattactgtgaaagttcaggataaaagaggtccagactggtac
ctggtacggctggagctgacggtgactgatgtgaatgacaatgttccggaatggaccatg
gttccctccccctacctggcagtggtatctcccaacgccctggccgggtcactggtctac
aagctccatgcccaggacggagatgagggcaacaacggggaggtggagtacttcctgtct
gatggcggtgacgggcgtttcgaggtggacagaaagagtggtcatgtccggactacgggg
ctgccacttcagagggacaaagagtacctgttgacagtggtggctgctgaccggctgggt
agccgtagtcccccagtggtggtgtcagtcatagcaggagccagagcaccacagttctcc
aacgcatccttcattatttcactacctgagaacacaccagagggacagcccttcctggca
actccagccgtgtccttccagaagcaaccaatcagctacagcctgctcatcaatcccagc
agtctgttcagcatgcaggcggacacaggggagatcactctgaccaggaccatagacttt
gagatggaccagcacagcttcctgctcatggtcagggccagcgaggaccagaacagtctg
agcagcgctgctgaggtgcgtgtgatcatcacagacgaaaatgactgtgttcctgagttc
ctgcagtccatttacagcaaagacagcgtgccggagactgtaaccacggcaacctctctg
ctacaagtgtctgccagtgactgtgactcggacctgaacgccgagttatcctactacact
ctgagcccagacttcagcatctctccccacggcaccattttccctgcagggcagctggac
tatgagaggcccaaccacctgtatgagtttgtggtgatggctgtggacaagggagatgtg
ccccggacaggtacggccaccgtacgcatccgcatggccaacgtcaacgacgaggtcccc
gagttctcccagcatgtctaccggaccttcgtctcggaggacgccgggcctaacaccctg
gttgccacggtgcttgccaaggaccccgacggcgatggaatcacctacagaatcacaaca
ggcaacgacgagggcaactttgttatcgacagccagaaaggtctgatccgtctgcgctcc
agcccacctcccagactccagggtgtagagtacgtcctgaacgtcacagcgaccgatgac
aacgcctctggcggcccccaggccctctcgtccaccgcccaggtcatcgtcggcgtggac
gacgtcaacaacaacaaacctgtctttgagaagtgccagcagtaccgggagcggaccacg
gtgctggagaaccagcctgcgggggcgttcgtcctccaggtccacgccgtggatgcagac
gagggctccaatgggagagtcacctatggattcatgcacaaagacagcactgtgcctgcc
ttcagtatccacccagacacaggtgcgattgtgacgtccaggaagtttgaccgcgagcgt
cagcgggagtacgcggtgacggtgacagctacggaccaggcagcagaccccctcataggg
atctgtcaactcaacatcctcattctcgatgagaacgacaacagccccaagtttgagaac
ctacgctacgagtacttccttcgggaggacacaatgattggcaccagtttcctgcgtgtg
gcggcccacgacgatgactacagcaccaatgccgccgtcacctactccatgtctaaagag
cagccagagtacctgagggtgaaccccttaaccggctgggtctacgtcaaccagcccatc
tcacagaggacctacatcacccgggagatagttgccacggacggggggaaccggagcagt
tcggtggagctgtccgtcaccatcaccaacgtgaagaaccagcctccgcagtgggacagg
gacagctatgacgtggtcatcccggagaataccgtcagggacacacccatagtgactatc
aaggccacctctccactgggggaccctagagtgacctataacctggaggatgggatggtg
ccggagaccaacatgcctgtacgcttctatctgacccctaaccgtgaggacggctctgcc
tccatcctggtggctgagcccctggactatgagaccaccaggaacttcatactgagggtc
cgggctcagaatgtggctgcagtgcctctggctgcattcactacggtccatctgaacatt
acagatgtgaacgacaatgttcccttcttcacctcgtccatctacgaggcgtcggtcaca
gagggggcggaggtggggacgtttgtcacgcaggtgtcctccaacgacctggacctggga
ctcaacggaaagatctcctactccctgctgaaagaccgcagtggggactaccagtacttc
cggattgatcccgagctgggctccatctacacagaggccgtgtttgaccgtgagaccaaa
ggctcctacctgctggaggtcaagtcagtggacggctgggagtcagcccgacctgggaaa
cacggacagcccaactcagacacggcgtacgtgagggttttcatcagcgatgtgaacgac
aacaagcctgtctttgctcagacggtgtatgaagtcgacgtggatgaggatgcagacgtg
ggctttgccatcctgactgtcagtgctaatgacgaggatgaaggcgccaatgctaagctc
cgttaccagatcacgtctggcaacactggcggggtttttgacgtggaaccagaggtgggc
accatcttcatcgcccagcctctggactacgagcggaacaagggctacaagctgctggtg
ctggcgtcggacgggaagtgggaggactatgcggatgtgatggtcaacatggtcaacaag
aacgacgaggcgccagtgttcacggtcaacgagtactacggctctgtgactgaagagctg
gatggatcgcctgtgttcgtgcttcaggtaactgctactgacccagataaggatgctgac
caggaggccctgcggtactccctccatggccagggagccgagagccagttcattattgat
gaggtgacggggaagatctacgctcagaggactctgaaccgggaggagcgggccgtgtgg
aggtttgtggtcctggccacagatgagggcggcgagggtctgaccggattcactgacgtc
atcatcaacgtgtgggacatcaacgacaacgcgcccgtcttcacctgtgcccccgattgt
catggtaacgtgccggagaactctgcccccggcacctctgttatggagatgacggccacc
gacctggacgactcggccgtgggccagaacgccgtgctctcctataggattgtgggtgat
acgggtacaggtggcagcggctctgacatgttcagcattaacccatccacgggcaccgtc
tcggtggcaatgagtggcctggaccgggagcaggcagaggcctacctgctggtggtggag
gccagggacgggggtggcatgatgggcacgggtaccgccaccatcagggtgacagacgtg
aatgaccacgcgcccaggttcacagagcggtcctgcctggccagggttcctgagagcagt
gagcccaacgcggtggtgctggagatgtctgctgaggactgggacacgggagagaacgcc
cagctcaccttcagtgtggtggcaggagacccggagcagaagttctccatggtgagccac
cggcaggagcaacgaggcaccctgagactgaagaagaggctggattacgagaggacaagt
gagcagcgcttcaacctcaccctgaaggtcgaagacctggacttctcaagcttcatccac
tgtatcatagaggtagaggactgtaacgaccacacacccatcttcatcgcgctctcccag
ccgccggcgcccctggccgaggacgtgcctgtgggcagcagtgtggccaggctgacggcc
agcgactctgactcaggtcaaaacaagaagatcacctacaaaatcctccaggagtcagac
attctgggccagttctctgtagaccagtctggtctagtcactgtgaccagcgctctggac
agagagacagcagcgcagcaccacctggtcgtcctggcttctgaccacggctctccggcc
ttgacgggcagcaccgtcattcaactgactctgctggacgtcaacgacaacgggccggag
tttgaggcagtgtacaccccagtggtgtgggagaacatcgctggtccccagctggtcaga
ctcaaccagacctccacactgctgcgggccgtagaccgagactcagcggagaacggatct
ccattctacttcagccttcccttagagctaaaccacagcaacgacttctacctgcaggat
aacggaaacggcacggccaccatcacagccctgagggccttcgaccgggagaggcagaaa
gagttccacctgcagatcatcatgagtgacagcggccatccacccaagacggtcactaac
actctgaccatcaccataggagacgagaacgaccatgctcaccaggcaggagagaaggag
atttttgtcaacagtcacagagggaggatgccgaccactgtcctggggaaggtctacgcc
ccggatcctgatgattgggacaacaagacctatgcctttgagggacatgtgcccaattac
ttcctcctgaacaagcggacgggattcctgatcattaaggagaacgctcccccgggcagc
tacgagtttcaggtgcgcgtgtcagacggagtgtggccagacgctgtctctggggtaacc
gtgaatgtgagggagctgcgtgacgaggccatctacaactctggatccctccgcctggca
gacatcacagcgaaggattttattgagcagcgtggtagcttgaggagtcgttatgaactg
ctggtggacttcctgtcggagatgttgtcggtgggcattgacgacatcaacgtcttcagc
ctgacagacgtcagggagaggacgctggacgtgcgcttcgcagtgcacagcagtcccttc
ctcagagcagagagactacagggatacctcgccgctcacaaacaaaagctgcagtcgttc
ctgcaagtgaacgtcagccaggtacatgtggatgagtgtgccaacacagactgtggcggc
agcggcggctgctccaacgtgctgagtgtcagcgatacgcccactgtggtggattctggg
agcatgtcactggtgtcggtgacggtggagtccacagcagtatgcagctgctccgggaga
gaacatgtccacaagatttgctcctcctatcccagaaacccttgcttcaatgggggcatc
tgtgtcgacactccgagcgggtacagatgccagtgccctacgcagttcgaggggccagag
tgccagcagaccaaacacagtttccacggcaacggctatgcctggtttcctcccataagg
ccttgcttcgagagccatctctccctggagttcatcacggaggttgcagatggtctgctg
ctctacagtgggcccctggcccagctacagccctgggacctcgaggacttcatggccata
gaattgatcgatggcactcccacactcaagataaaccatggctcgggcacactggtcctg
cagttgccaggcaacgtaaacgtggcggacagacggtggcaccgtctggacgtgaggagc
aacagtaaggaggtacgcttcacactggaccgctgtgccggggccaccgtcatggagatg
gagggagtgggcagctggctgaccacagaggaccactcgtcctgtgaggtcactggtgtc
actcccaacctggacaggcacctgaatgggacccaggtgttacagctgggtggagtcaat
gaggacctgccctatgtctacccgcagttacaacacaaacactttactggctgcatccgg
aacctcgttgtcgacagcaagttctatgacttgggcaatccagcggactctgtgggcagc
tccccagggtgcctgactacggatgggagctgtgtcaacgtgggcatcccctcctgtggc
cctcggggtcgctgccatggagagtggggctccttcagctgccagtgcataccggggtac
actgggactcaatgtgagcaggaagttccagagttttcctttgatgggcggagtcatgtt
cattaccagttggcatctcctctgccaacccggcggacccaggcacaggttctggtccgg
acccgcaaacatggtagtgccatcctcagcctactgtccaaggaacagactgaatacctg
cgcttagagatctaccagggcctactggctgtcttctataacctgggagacggagactac
aacctgacactgccctcctatcgcctggacaatggtgagtggcacgaggtctacctggat
cgacacgataacgagctgaccctgcgtctggatgggggcgggggcagacgtgaggccagc
gcagctccaggccggagccgagagatcatcaccgacccaacattggtgatgctgggaaac
gccttcccctcaggctccaacaagagcttccagggttgcatgcgggacctgaggctgaac
ggtcgatacgtacctctggatggccagtccagagacgggatctctgtggtcagctcccag
gggctctccgtgggctgctcttccgactcctgcaagaggaaccagtgtagcccccccttc
acctgcgttgacctctggagagtccatgagtgcagatgtccccctggccacatggtgaag
gtgaacggtactggaaagttctgcgtctacaccctgtgtgccagtcggccgtgccaccgg
ggcacctgcgtggcacagtcgccctccaagttcacgtgccactgcctcgagggctaccgg
gggcgccactgcgaggtggcgctggccatctaccgagacgacgtgggcctgagcttcagc
tccctgttcgccatttgcatctgcttcatggctctgctagtgctgctgctgggcatcttc
ctgtacacccgctggcgcagttacaagggcctaaaggagggcgtttaccacgtgtcagct
caccatgacggctgggaggatatcagagagaacgtgctcaactacgatgaggaaggagga
ggagaggaggaccagaatgcctatgatatggccgagctacagaagtctctccagcccagt
ccggcccagtctgtccagtacagccgctccagggccatccaccaacatcaccacacccag
caccaacatccccagccccaggacactcttagcaggttgggcgccaacaccgccctctcc
tcctttaccaccaccctgcggagggatgtgccgcccaccaggacccctgcccagggccag
agcaggcccctcctgctggccagaaagagcctgtccttctccagccaggacctggcccgc
tacctgtgtgagatcatccgggatgctgaccaggctccagagacggcccccttcgactcc
ctgcaggtgttctccacggaggggggaggctcgctggccgggtccctcagctccttcagc
tcagccgggctggaggaggacacggctaggggccaagactccctgaaggattggggccca
cgttttgagaaactcaaagccctctacgagaagaccgaggccagtgacctctga
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integrated database retrieval system