KEGG   Oncorhynchus gorbuscha (pink salmon): 124033898
Entry
124033898         CDS       T07892                                 
Name
(RefSeq) laminin subunit beta-1-like
  KO
K05636  laminin, beta 1
Organism
ogo  Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04510  Focal adhesion
ogo04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:ogo00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    124033898
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    124033898
SSDB
Motif
Pfam: EGF_laminin LAMININ_IV_B Laminin_N EGF_LMN_ATRN LAMB1 ATG17_like F5_F8_type_C
Other DBs
NCBI-GeneID: 124033898
NCBI-ProteinID: XP_046202262
LinkDB
Position
LG01:complement(17417267..17449231)
AA seq 1785 aa
MLIIQIATLLSAGACVLAQVPEFSDVCTEGSCYPATGDLLIGRAHQLSSNSTCGLHRPEP
FCIVSHLQEEKKCFVCDSTDVYVKSVVNTTTGHRVENVVTTFAPNRLKTWWQSENGLEKV
TIQLNLEAEFHFTHLIMTFKTFRPAAMVIERSADFGKNWQVYRYFAYDCESAFPAISSGP
MQKVDDVICDSHYSDIEPSTEGEVIFRVLDPVFRIEDPYSPRIQNMLKITNLRVKFTKLH
TLGDNLLDSRMEIKEKYYYAVYDLVVRGNCFCYGHASECAPVDGSGDVVEGMVHGHCMCN
HNTMGLNCEKCQDFYHDLPWRPAEGRNTNACKKCNCNQHSDSCHFDMAVYVSTGNVSGGV
CNECQHNTMGHNCEQCKPFYFQHPERDIRHPSICEPCNCDPVGSLNGGICDRMTDVSSGL
IAGQCRCKPNVEGEQCDQCKQAHYGLGDHLLGCMACTCNALGTVPGGSPCDTDSGVCYCK
RLVTGRDCDQCIPQHWGLSNDMDGCRPCDCDLGGAINNDCSQETGQCVCREHMFGRRCDQ
VESGFYFIALDHYTYEAEDAKFGPGVTVVQRPHPQDRSPTWTGIGFVNVPEGAYLEFSID
NIPHSMEYDILIRYEPQLPDQWEEVLMTVMRPSVISADSRCANTMPDDDNQMISLHPGSR
YAVLPRPVCFEAGMNYTVRLSLPLYSALSDVQSPYTLIDSIVLMPHCKNLEIFTGSGGGD
LATSSAWNTFQRYRCLENSQSVVKTPSTDICRNFIFSVSALLHQGAKACQCDPQGSLSTV
CDASGGQCQCRPNVVGRNCDKCSPATYLFGPSGCRSCDCNPQGSEHVFCHEATGQCACIH
GVYGRQCDHCLPGHWGFPNCRPCTCNGHTEQCDPYSGECLDCREQTTGHNCERCLEGYYG
DPVLGSGDHCRPCMCPDGPGSGRQFAGGCYHGLDSHYQVFCICNPGYRGARCEECAPGYY
GNPHENGGQCQPCQCNNNIDMLDQESCDARTGECLKCLYHTEGRGCHSCKLGYYGDALTQ
NCRKCVCNHLGTNPATCPAVGDCHCDLGSGQCQCLPNVVGQHCDQCAPDTWNMASKRGCE
SCDCDPNHSFGTSCNELSGQCSCKPGFGGKMCQECRELFWGDPEVKCNACDCDPQGIAEQ
QCNKANGHCVCLEGVSGPRCNLCARGSSGTFPYCERCHQCFADWDVIVGQLTNQTHRLVN
KVNTIKASGITGPYKHAIDNMEQSARSIRTILAQNLATQPLSEIQQLLEQATDLMEEMSN
KLNLTEEALAQVSSDDNSTNTKLDSLKEDAQKLDRTVKELLDQVELIKNSDVRGATDSVT
KYYQQSLAAGAQANASTTDPGNPVESSFVLRQATEDKMNDTRDEFHRRQEEHSKRLDDLA
DQLETLDLSELSEKTCGSPAGEACADSPCGGLSCVDSEGNRRCGGEGCNGLVTLANNAWH
KAKDFDQEILMAMEEVDKLSKMVSEAKVKADEAKLSAQDVLLKTNETKQRVDQSNEELRS
LIRQIRDFLTQDAADMESIEAVANEVLAMQMPSTPAQLQNLTDEIRERVRDLAQVETILN
QSADDVQRAENLLKQAGRASKEATDVRETAEMVKQALEEAERAQKAAAEAIKQATTDIKG
TNDLLSSVESETADSEFKLNNATQRLLWLEKDITLLREKAQNTSLSSEQTERDAESINKV
AEQVKKDLESELKDKYHTVQDLIKQEAGGVADAKKRAELLQQEATDLLLQASDKLQLLKD
LEKSYEDNQKTLEDKANQLVDLEKAVKELLQEISHKVTVYSTCLF
NT seq 5358 nt   +upstreamnt  +downstreamnt
atgttgatcattcaaattgcgaccctgctatccgcaggggcgtgcgtccttgcccaggta
ccggagttcagcgatgtgtgcacagaggggagctgctaccccgccacgggagaccttctc
atcggcagagcccaccaactctcctccaactccacatgcggcctccaccggcccgagccg
ttctgtatcgttagtcatttacaggaagagaagaaatgctttgtgtgtgactccaccgac
gtctatgtcaaaagcgtggtgaacaccaccaccggccaccgggtggagaatgtcgtgacc
acattcgcccccaaccgcctgaaaacctggtggcagtccgagaatggtcttgagaaagtg
accatccagctgaacttggaggcagagtttcatttcacccacctcatcatgaccttcaag
accttccggcctgctgccatggtgattgagcggtcggccgactttgggaagaactggcag
gtgtaccgctacttcgcctacgactgtgagtcagcattccctgccatatcctcggggccc
atgcagaaagtggatgacgtcatctgcgattcacattactccgacatcgaaccatcgaca
gagggagaggtcatcttccgagttttggatccagttttccgtattgaagatccctacagc
cccagaatccaaaacatgttgaagatcaccaacctaagggtgaagttcaccaagctgcac
acactgggagacaacctgttggactcccgcatggagatcaaggagaagtactactacgct
gtctacgacttggtggtacggggtaactgcttctgctacggacatgcctccgagtgcgcg
cccgtcgatgggtctggggatgttgttgagggaatggtccatggccactgtatgtgcaac
cacaacaccatggggctgaactgtgagaagtgtcaggacttctaccatgacctgccatgg
agaccagccgagggacgcaatactaacgcctgtaaaaaatgtaactgtaaccagcactca
gactcgtgtcacttcgacatggcagtatacgtctccacgggtaacgtgagcggtggtgtg
tgtaatgagtgccagcacaacactatgggacacaactgtgaacagtgcaaacccttctac
ttccagcacccagagagggacatccgtcaccccagtatctgtgaaccgtgtaactgtgat
ccggtgggctctctgaacggtgggatctgtgacaggatgactgatgtgtcgtctggattg
atcgctggccagtgtcgctgcaagcccaatgtggagggagagcaatgtgaccagtgcaaa
caggcccattacggcttgggagaccaccttctgggctgcatggcctgcacctgtaatgcc
ctggggacagttcctggagggagcccatgtgatacagactcaggagtctgttactgcaaa
cgcctggtcaccgggagggactgtgaccaatgtattcctcagcactgggggctaagcaat
gacatggatggctgcagaccatgtgactgtgacctgggtggagccatcaataacgattgt
tcccaggagactggtcaatgtgtgtgtcgagaacacatgtttggccggcgctgtgaccag
gtggagtcaggcttctacttcattgccctggaccactacacctacgaggcagaggacgcc
aaatttggacctggtgtgacagtcgtgcagagaccccaccctcaggaccgtagccccact
tggacagggataggtttcgtcaatgttccagagggggcctacctggagttctccatcgac
aacatcccccactccatggagtacgacatcctcatccgctacgagcctcagttaccagac
cagtgggaggaggtgttgatgacggtgatgcggcccagtgtgatttcagctgacagtcgc
tgtgccaacaccatgcctgacgacgacaaccagatgatatccctccaccccggatcacga
tatgcagtgctccccagaccagtgtgtttcgaggcagggatgaactacactgttcgtctg
agtctgcccctctactccgcactcagtgacgtccagtccccatatacactcatcgactcg
attgtgctgatgccccactgtaagaacctggagatcttcactggctctgggggcggtgac
ttggccaccagcagtgcctggaataccttccagcgctaccgctgtctggagaatagtcag
agcgtagtgaagaccccgtccacagacatctgccgcaactttatcttcagcgtatctgct
ctgctgcaccagggagctaaagcatgccagtgtgacccgcagggctctctcagcacggtg
tgtgatgccagcggcgggcaatgccagtgtcgccccaatgtagtaggcaggaactgtgac
aaatgttcccctgccacctacctgtttggacccagtggctgcagatcctgtgattgcaat
ccccagggatcggagcatgtattctgccatgaggctactggccagtgtgcttgtatccac
ggggtgtacggccgtcagtgtgaccactgtttgccgggacactggggcttccccaactgt
cgcccctgcacctgcaatggccacactgagcagtgtgacccctactctggagaatgcctg
gactgccgagaacagaccaccgggcacaactgtgagaggtgtctggaaggttactacggc
gaccctgtcctgggttcaggggaccactgtcgtccctgtatgtgtccggacgggccaggt
agcgggcggcagtttgccggtggatgttaccacggtctggactctcactaccaggtgttt
tgtatctgtaatcctggatacagaggtgccagatgtgaggagtgtgccccaggttactat
ggaaatccccatgagaacggcgggcagtgccaaccatgccagtgcaacaacaacattgac
atgctggaccaggagtcctgtgatgccaggacgggtgaatgtctcaaatgtctctaccac
accgagggtcgaggctgccacagctgcaagctgggttactatggagatgccctcacacaa
aattgcagaaagtgtgtgtgtaaccacctgggtaccaacccagccacgtgcccggcggtg
ggcgactgccactgtgatctgggcagcgggcagtgccagtgtctaccaaatgtggtgggt
cagcactgtgaccagtgtgcccccgacacctggaacatggccagcaagaggggctgcgaa
tcttgcgactgtgaccccaaccactcatttggaacgtcctgcaatgagctgagtggccag
tgctcctgtaaacctggctttgggggtaaaatgtgtcaggagtgcagagagctgttctgg
ggagaccctgaagtcaaatgcaatgcatgcgactgtgacccacaaggcattgccgagcag
cagtgcaacaaggccaacggtcactgtgtgtgcttggagggcgtgtctggtccccgctgt
aatctctgtgcccggggctcctctggcaccttcccctactgcgaacgctgccaccagtgc
ttcgccgactgggatgtgatcgtaggtcagctgaccaaccagacccacaggctggtcaac
aaggtgaacaccatcaaggccagcggcatcaccggaccatacaaacacgccatagataac
atggagcagagcgccaggtccataagaactatcctggcccagaacctggcaacacagcca
ctgtcagagatacagcagctactggagcaagccacagatctaatggaagagatgagcaac
aagctgaacctcactgaggaggcgttggcccaagtatcatctgatgacaacagcaccaac
accaaactggactctctcaaagaggacgcccagaaactggatcgcactgtcaaggagctg
ctggaccaggtggagctcatcaagaactctgatgttcggggagcgacagacagtgtcaca
aagtactaccagcagtctctggctgctggggcccaggccaacgcctccaccaccgaccca
ggcaacccggtggagagctctttcgttctacgacaagctacggaggacaagatgaacgac
accagggacgagttccataggaggcaggaagaacactccaagagactggatgacctggcg
gatcagctggagacattggatctatcagaactcagcgagaagacgtgcggcagcccagct
ggtgaggcgtgtgcagactctccgtgcgggggtctgagttgtgtggactctgaggggaac
aggaggtgtgggggtgaggggtgtaacggtctggtcaccctggccaacaatgcctggcat
aaggccaaggactttgaccaggaaatcctcatggccatggaggaggtggacaagctctcc
aagatggtgtcagaggccaaggtgaaggcagacgaggccaagctgagtgcccaggacgtg
ctgctgaagacaaacgagacgaagcagcgcgtggaccagagcaatgaggagctgcgcagc
ctcatccgacagatcagagacttcctcacacaggatgcagcagacatggagagcatcgag
gcagtggccaacgaggtgctggccatgcagatgcccagcacgccagcccagctccagaat
ctgacagacgagatcagggagagggtgcgagatctggcccaagtggagactatcctcaac
cagagtgctgacgatgtgcagagagccgagaacctattgaagcaggcaggcagagctagt
aaagaggccacagatgtgagggaaacagcagagatggtgaagcaggctctggaagaggct
gagcgtgcccagaaagcagcagccgaggccatcaaacaggctaccactgacattaaaggc
acaaatgacctcctgtcctcagtggagtcggagacagcagactcagaattcaagctgaac
aacgccacccagaggctgctgtggttagagaaagacatcacactgctcagagagaaggca
cagaacacctcgcttagctctgaacaaaccgagagagatgcagagagcatcaacaaagtg
gctgagcaggtcaaaaaggacctggagtcggagctgaaggataagtaccacaccgtgcag
gacctgatcaaacaggaggccgggggtgtggccgacgccaagaagagggcggagcttcta
cagcaggaagccacagaccttctgctacaggccagtgacaaattacagctactgaaagat
ttagagaagtcctacgaggacaaccagaagactctggaagacaaggccaaccagttggtg
gatctggagaaggctgtgaaagagctgctgcaggagatcagtcacaaagtcactgtgtac
agcacctgtctgttttaa

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