Oncorhynchus gorbuscha (pink salmon): 124033964
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Entry
124033964 CDS
T07892
Name
(RefSeq) rho guanine nucleotide exchange factor 28-like isoform X1
KO
K21072
A-kinase anchor protein 28
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124033964
Membrane trafficking [BR:
ogo04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
124033964
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH_16
PH
Ank_2
C1_1
PHD
PHD_2
Motif
Other DBs
NCBI-GeneID:
124033964
NCBI-ProteinID:
XP_046202471
LinkDB
All DBs
Position
LG04:32541146..32743323
Genome browser
AA seq
1778 aa
AA seq
DB search
MELSRREVPLYGQAKVFALLQAPDPLPKEAEIFIVLEGSTLAHVIRAQNDVMLCFIVPGH
NLAETVSVCAYIYSETTPFTCVGGSRLKYVQDDAQDLAEHLVTHGHHLSSSDHRELSSRF
CLREESSRWAMDRRVALAMANLDIPHSWNVLASPSGEELRPRESPLHLAVRWGLCCLAEL
LLCQPGGLMAVTLPNEEGVTPLQLAHNRGHTQLLELLTHPPNPLATPPAGLSQVWAVHSH
LLRFCHDSENLTLTVRQNPQWNHQQNRQADILLLRDRLRDHNFLRQIKALRREQSETILE
KEELVDEPGENGLYPVITAGSTATVDNDLEEHLMFCLKEEQESLTYSEKSQSMRRAQALS
STLAAASRLSAMIHQPGKDQMHTNAMLVDQVDDLDIKYRSPVEEEVSSVPQRNNPAWDSF
FGGLPGSMAPHRDQAFPLPSSPLAYPFPFSGGGNRGRIQPSVSLSSGLSHRGTSQPEKTC
VLSSSLEPVECDSWEEATLCQSPPSLPNFSSPWQRSDLHTSSGDKRDSFDNSLHFNRTHS
NHSHTPSKDQSDTQLRLRSYSYSSPKTQLSRPLFTRDAAISDLTEEHRDFNLTETPREKR
DVGFHKRVQSAEDEGSSSSSLQHLTLSEFLKEIEDEEWDKYIIPSKVESEKYKVSRTFSF
LKSRMSSPRNKIKVKEGKEKTGKEKTGATNVHQFVPVSPSGPSGLSVYVTCDKPVPGKEF
LQCTNCSLSVHKGCRDSTAACGKRPLEKNVAMLKSKSLPHMMREGSPASLTSSSSLLTML
PRGRKYMTAPLSKSPSESTDRRLRDAVGVSVDSDVWNSCSLNEEGVQVTGTASSTDYHLT
TQESVDTPLLSDLSADLVGFEVESWSLAVTTEFCRKHDKHTVKRQDVIYELMQTELHHIQ
TLTVMSEVFRRGMLDELQLDWECVARIFPCLDPLLLFHRNLFGSLQERRYASAQPGHPHN
YCIHSIGDILLQQFSEDNAVKMKQVYGEFCSHHTEAVKVFKELQQQNKKFQVFVKQQSNN
SLVRRREVPEFILLVTQRITKYPVLLERILHYTPEGSEEHTELSRALTQVRDIITAVDTS
VSKYEKAQELQEVLSRVENKSLSKLKSGEVFRKDDLLGKHQQRELQHKGLVYWKTATGRL
KDTLALLLTDVLVFLQEKDQRLIFAAVDQKPPVIPLQKLIVREVANEERGMFLISASSVG
PEMYEVHTFSKEERNAWMRHIRRAVESCPEEEEERSVETEVRRNTELRVQKIYKFQDTLA
SQDQRICSGLEEKLQLYAELTELTLHTPEPLPQHHLLVQADPDAQMPPQTTALLTAALKE
AEKLMSTLQASEAHTEPSHSPPVRVPEYCSYNSHCRIQESPAELDYPSSVSSASLVSDGE
WAGPDTILWHSITELRRRDTNGEPMKVAESVQSLTQLLYSLQAAVTIQDSWYEVQKLLLL
ELEHPLPHTPSCLHGNVAQDKEKHRSTEKKKEEVERMSVERKREEVEGIQKLQGRLRQDQ
QRWERECLARERQQGEKVSLLKQRERQCHLEAESLRREREELEQQLLEYQQNLERLREGQ
RSMERERDRVEAEHRLLQSWRHNRQSSLPIMISLDLEQVSNHSRSGSLDGNEAGLLHSLQ
QNRLHHNQHQHQSLHSGLRKNQDSPLHSANLCLRPSLYYSLNTLLSQATSKPSTELLTHQ
HYAHPQHSHLQSGSSPNNPFRSRFTTGHEGPNNNFSPPQDRLTLGLLGSLGSGVTGLGLY
EENFPTSASLTPLLTPQAYFSLNGKNSEDGGEENIVYL
NT seq
5337 nt
NT seq
+upstream
nt +downstream
nt
atggagttgagcagaagagaggtgcctctgtatgggcaggccaaggtgtttgcattgctg
caggccccagaccccttgccaaaggaggcagagatcttcatcgttctagaaggttctacg
cttgcccatgtgatcagagcccagaacgatgtcatgctctgcttcatcgtgcctggtcat
aacctggctgagactgtctcagtctgtgcttacatctactcagagaccacaccttttacc
tgtgtgggagggtccaggctcaagtacgtccaggacgacgcccaggatctggctgagcac
ctagtaacccacggtcaccacttgagctccagcgaccacagggagcttagcagccgcttc
tgcctgagggaggagagctctcgctgggcaatggaccgccgtgtggccctggccatggcc
aacttggatatcccccacagctggaatgtactcgctagtccatctggagaggagttgcgt
cccagagaatcccctcttcacttggctgtgcgctggggtctgtgttgtctggctgagctg
ctgctgtgccagccgggaggactgatggcagtgactctgcccaacgaggagggggtcacc
ccactgcagctagcacacaacagagggcacacacagcttctggagctactcacacacccc
cccaaccccctggccacaccgccggccggtctgtcccaggtgtgggctgtccactctcat
ctgctgaggttctgtcacgactcagagaacctaaccctgactgtccgacagaacccacag
tggaaccaccagcagaaccgacaggctgatattcttctcctgagagatagactgagagat
cacaacttcctccgacagatcaaggccctgagaagagagcagtcagagaccatactggag
aaagaggaactagtggatgaaccaggagagaatggtttgtatcctgtcatcactgcaggc
agtaccgctacagtagacaatgacttggaggagcacctcatgttttgtctaaaagaagaa
caagaatcactgacatactctgagaagagccagtcaatgaggagggcccaggctctgtcc
tctactctggctgctgcctccagactctcagccatgatccaccaaccagggaaggaccag
atgcacactaatgccatgctggtggaccaggtggatgacctggatataaagtaccgttct
ccagtggaggaggaggtgagctctgtaccacagaggaacaaccctgcctgggactccttc
tttggaggtctccctggctccatggctcctcacagggaccaggccttcccccttccttcc
tctcccttggcctacccctttcctttctctggtggtggaaatagggggaggatccagccg
tccgtctccctctcctctgggctcagtcacagaggaaccagtcagcctgagaagacctgt
gtactgagttccagtctggaaccagtagagtgtgacagttgggaggaggccaccctgtgc
cagtctcccccctccctccccaacttctcatctccctggcaacgctccgacctgcatact
agctctggggacaagagggactcctttgacaactcgttgcacttcaaccgtacacactct
aaccattcacacacaccttccaaggatcagtcagacacacagcttcgtctgcgctcttac
tcctactcctcccccaagacccagctttcacgccccctgttcacccgagatgcagcgatc
tctgacctgacagaagagcatagagacttcaacttgactgagacacccagagagaagagg
gatgtgggtttccataagagggtccagtctgctgaggacgaaggcagctcgtcatcatca
ctccaacacctcaccctctcagagttcctcaaagagattgaggacgaggagtgggataaa
tacataattccctccaaagttgagtcagagaaatacaaagtcagcagaaccttcagcttc
ctgaagagcaggatgtccagcccacgtaacaagatcaaggtgaaggagggaaaagagaag
actggaaaggagaagacaggagcaactaacgtacaccagtttgtgccagtctctccctca
ggaccctctgggctgtctgtatatgtgacctgtgacaagcctgtccctgggaaagagttt
ctgcagtgtaccaactgctctctgagtgtccataagggctgtcgtgactcgactgcagcc
tgtgggaagaggcctctggagaagaatgtggcgatgttaaagtccaaatctctcccacac
atgatgagggagggttcccctgcctccctcacctcttcctcctccctcctcaccatgctg
ccccgaggcagaaaatatatgactgctcccctatctaagagcccctctgagtctacagac
aggaggctgagggatgctgtgggggtcagtgtggacagtgacgtgtggaacagctgctcc
cttaatgaagagggggtacaggtcacagggaccgcatcatccacagactaccatctcacc
acacaggagtcggtcgacacccccctgctcagtgacctatcggctgacctggtggggttt
gaggtggagtcctggagtctggccgttacaactgagttctgcagaaaacacgacaaacac
accgtcaaacgtcaggatgtcatctacgagctgatgcaaacagagttgcaccacatccag
acactgacggtgatgtccgaggtgtttcgtcgagggatgctggatgagctccaactggac
tgggagtgtgtggctcgcatctttccctgtctggatcctctcctgctcttccacaggaat
ctcttcggatctctacaggagcggcgatacgcttcagcccagcctggacacccacacaac
tactgcatccacagtataggggatatactgttgcaacagttctcagaagacaatgctgtg
aagatgaagcaagtgtacggagagttttgtagtcaccacacggaggctgtcaaagtcttc
aaagagctgcagcagcagaacaagaagttccaggtgtttgtcaaacaacagagtaacaac
tctctggtcagaagaagggaggtgccagagttcatcctgttagtgactcagcgcatcacc
aagtatcctgtactactggagaggatactgcactatacacccgagggcagtgaggagcac
actgagctgtcgcgggcactcactcaggtgcgtgacatcatcactgcagtggacacgagt
gtgagcaagtacgagaaagcccaggagctgcaggaggtgttgagtcgcgtggagaacaag
agcctttccaagctgaagagcggcgaggtgttccgcaaggacgacctgctaggaaaacac
caacagagggagctgcagcacaagggacttgtctactggaaaaccgctacgggacgactg
aaagacaccctggctctgctgctgactgatgtcctggtgttcctgcaggagaaggaccag
agactcatatttgctgccgtggaccagaagcccccagtcatccccctgcagaagctaatt
gtgagagaggtagccaatgaggagagagggatgttcctaatctctgcctcctcagtgggg
cctgagatgtacgaggttcacaccttctcgaaagaagagaggaacgcctggatgagacac
atacgacgggccgtagagagttgtcctgaggaggaggaagagagaagtgttgagactgag
gtcagacggaacactgagctgagagttcagaagatctacaaattccaagacaccctggca
agtcaggaccagcgtatctgcagtggtctggaggagaagctacagctgtatgccgagctg
acagagttaacccttcatacaccagagcccctgccacagcaccacctactggtccaagca
gaccctgatgctcaaatgccaccgcagaccactgcactactcacagctgcactcaaagag
gcggagaagctgatgtctaccttgcaggccagtgaggcccacactgagcccagccacagc
ccccctgtcagagtcccagagtactgcagctacaacagccattgcaggatccaggagtca
cccgctgagttggactatccgagcagtgtgagctcggcctctctggtgtcggatggtgag
tgggcagggccagacaccatcttgtggcactccataaccgagctgaggagaagagacacc
aatggagaaccaatgaaggtggcagagagtgtccagagcctgacccagctgctctacagt
ctgcaggcagctgtgaccatccaggacagctggtatgaggttcaaaagctcctcctactg
gaactagagcacccgctcccacacaccccctcctgtctccatggcaatgtggcccaggat
aaggagaaacaccggagtactgagaagaaaaaggaggaggtagagaggatgagtgtggaa
aggaagagagaggaggtggaggggattcagaagcttcaggggaggctgagacaggaccag
cagcgctgggagagagagtgcctggccagggagagacaacagggggagaaggtgagtctg
ttgaagcagcgcgagcgacagtgtcacctggaggctgagagcctgcgccgagagcgggaa
gagctggagcagcagctgttggagtaccagcagaacctagagaggctgagggagggtcag
aggagcatggagagggaaagggacagggtggaagccgagcacaggctgctccagagttgg
agacacaaccgccagagctccctgcctattatgatatcgctggacctggaacaggtgtcc
aaccacagtcggtcaggcagcctggacggcaacgaggctggtcttcttcattcccttcaa
cagaatcggctccaccacaaccagcaccagcaccagagcctccactctggcctgagaaag
aaccaggacagccccctccatagcgccaacctgtgcctcaggcccagcctctattacagc
ctcaacactctgctcagccaggccaccagtaaaccatccacagaattactgacacaccaa
cactatgctcacccccagcacagtcacctccagtcaggcagctccccaaacaaccccttt
aggagcaggttcaccacaggacatgaggggcccaacaacaatttcagccctccacaggac
aggctgaccctggggttgttgggttcattggggtcaggggtcacaggcctgggtctgtac
gaggagaacttccccacctcggcatccctcactcctctcctcaccccacaggcctacttc
tctttgaatggaaagaacagtgaggatgggggagaggagaacattgtgtacctctga
DBGET
integrated database retrieval system
