Oncorhynchus gorbuscha (pink salmon): 124033967
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Entry
124033967 CDS
T07892
Name
(RefSeq) synphilin-1 isoform X1
KO
K04558
synphilin-1
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
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Gene cluster
GFIT
Motif
Pfam:
SNCAIP_SNCA_bd
Ank_2
Ank_4
Ank
Ank_5
Ank_3
DUF948
Motif
Other DBs
NCBI-GeneID:
124033967
NCBI-ProteinID:
XP_046202476
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Position
LG04:32878408..32904187
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AA seq
884 aa
AA seq
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MDAPEYLDLDEIDFTDDSVYSVTSLKNIPELSRRNDGQGEERQAPAINWSRGVSSHSGGG
IKPTGIADVHSKFRPVKRVSPLKHQPETSDNESDNEAQAHNGEGSSKEEASDKTPAACEG
QGFKAKSLGTGGALFGELEHYDLDMDEILDVPYIKSSQHVSTLPRVPHDKRTVGGGGNAS
DRCHGVKTSTLTHPESLASVTQYCMLSPVKWSDMRKLKSLDPDNHRPPAGGYDHSTPGSL
SSSSASDMDKLLANRAYPETQAHKTGADTPGSSQAMMFPLQGCAGSRQDSSKTWNGTRLH
GECDDETKKSQNIINIIREGQISLLPHLAADNLELIQDEEGNNLLHISASQGHADCLQHL
TSLMGEDCLNERNNHQLTPAGLGVKNGHLECVRWMVSETEAIAELSCSREHPSLIHYAAR
YGQEKVLLWLLQFMQEQAISLDEVDQYGNSAVHVAAQYGHLTCIQTLVEYGSNVTVQNQG
GERPSQSAERQGHTTCARYLVVVETCMSLASQVVKLTKQLNEQATKTNALQNQVQLHLDP
LKAEGTLPRSPSSHVPSVEAWPEMTLTAEGTPGDGHWILRQRSVDSDTVLRQLLGKDISD
KVCTKEKLSLEFQEGSKAGPPSLNGANPGPLRRMGVVERRELKLARLKQIMQRSLSESDS
DTYPPEEAKHGPPPGVRLERPSHLPIAESEEPVGNLHLGMKKHTLTTEHKSAFALSTSKS
MDGYPSPTSDKSELDADGKPEACGDFPDYNNGQKITTSPKSALKSPTSRRKTSQNLKLRV
TFDEQVVHKTGPPESEPPKGAHSKEGAGGRTPTGSETVKRPFGTFRSLMESLSGNQNSNN
NNVQTSPSVKQSSCGVSQGSPGRKTEVKTSPCGHSKGKSKASAV
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atggatgctcctgagtacttggatttggatgagattgacttcactgatgattcagtgtat
tctgtgacatccttgaagaacattccagagctgtccagaagaaacgatggtcagggagaa
gaaagacaagccccagccatcaactggagccgtggtgtgtcgtcacatagtggcggtgga
atcaagccgaccggcatcgccgacgtccacagcaaattccggcctgtgaagagggtctcg
ccactcaaacatcaaccggagacctctgacaacgagagtgacaacgaggctcaggctcac
aatggggaaggcagtagcaaagaagaagcctcagacaaaacacctgcagcctgcgaaggc
cagggatttaaagccaagagcctgggaaccggaggagctctttttggggagctggagcac
tacgacctggacatggatgagatactggacgtgccttacattaaatccagccaacatgtc
tctactcttcccagagttccccatgacaaaaggacggtgggtggcggtggtaacgccagt
gacaggtgccacggcgttaagacctccacacttacccaccctgagagccttgcaagtgtc
acccagtactgtatgctttcgcccgtcaaatggtctgatatgaggaagttgaaatctctg
gacccggacaatcacaggccacccgctgggggctatgaccactccacaccaggatcactt
agcagttcctctgcctcagacatggataaacttttagccaacagggcctacccagagaca
caggcacacaagacaggggctgacacccctgggagcagccaggctatgatgttccccctc
cagggctgtgctgggtctaggcaggacagcagtaagacctggaacggtacaagactacac
ggagagtgtgatgacgagaccaagaaatcccagaacatcatcaatatcatccgagagggg
cagatctctctgttgcctcacctggccgctgataacctggagctgatccaggacgaggag
gggaacaacctgctccacatctctgcgtcccagggccacgctgactgcctgcagcacctc
acctccctcatgggagaggactgcctcaacgagcgcaacaaccaccagcttacacctgct
gggctcggggtgaagaacggccatttggagtgtgtgcgctggatggtgagtgagacggag
gccatcgccgagctaagctgtagccgagagcaccccagtctcatccactacgcagcccgc
tacggacaggaaaaggttctgctgtggctgctccaattcatgcaagagcaagccatttct
ctggacgaagtggaccagtacggaaacagtgcagtgcatgtagctgctcagtacggccat
ctcacttgcattcagaccctggtggagtacggctccaacgtcaccgtgcagaaccagggc
ggcgagaggccttcccagagcgccgaacggcagggccacaccacctgcgcccgctacctg
gtggtggtggagacgtgcatgtcgctggcctcccaggtggtcaagctcaccaagcagctc
aacgaacaagcaacaaagacgaatgctctacagaatcaagttcagctacacctggatccc
ttaaaagcagagggaactttgccacgatcgcccagctcccatgtcccgtctgtggaggcg
tggcctgaaatgaccctgaccgcagaggggacccccggggatggccactggatcctgagg
cagaggagcgtcgactcagacactgtcctgcgccaactactgggtaaagacatctcagac
aaggtgtgcaccaaggagaagctgtccctggagttccaggagggctccaaagcggggcct
cctagtctgaacggggccaaccctgggcccctgcgcaggatgggggtggtggaaagacgg
gagctgaagctggccagactcaagcagatcatgcagcgctctctcagcgagtccgactcg
gacacctacccccctgaagaggccaaacatgggccccctccaggggtgcgcctagagaga
cccagccacctgcccattgcagagagcgaggaacctgtcggcaacctgcatctgggcatg
aagaagcacaccttgaccaccgagcacaagtcagctttcgccctcagcacctccaagtcc
atggatggatacccctcgcccacatcggacaaaagcgagcttgacgctgacgggaaaccg
gaggcctgtggagatttccccgactacaacaatggacaaaagatcacgacgagccccaaa
agtgcactcaaatcgcctacctctcgaaggaagacctcccagaacctgaaactgagggtg
acctttgatgagcaggtggttcacaagacggggccaccagagagtgagccgcccaagggt
gcccacagtaaagaaggagccggaggtaggactcccacagggtctgagacggtgaagcgc
ccgttcgggacattccgctccctaatggaatcgctgagtggaaatcagaacagcaacaat
aataatgtccaaacgtctccctctgtcaaacagtcaagctgtggtgtgtcccagggctcg
cctggcaggaaaactgaggttaaaaccagtccatgtgggcactccaagggcaagagcaaa
gctagtgctgtttag
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