Oncorhynchus gorbuscha (pink salmon): 124034069
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Entry
124034069 CDS
T07892
Name
(RefSeq) ATP-binding cassette sub-family A member 2-like isoform X1
KO
K05642
ATP-binding cassette, subfamily A (ABC1), member 2
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo02010
ABC transporters
ogo04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
124034069
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
124034069
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ogo02000
]
124034069
Transporters [BR:
ogo02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
124034069
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_15
Motif
Other DBs
NCBI-GeneID:
124034069
NCBI-ProteinID:
XP_046202742
LinkDB
All DBs
Position
LG04:40876351..40968300
Genome browser
AA seq
2542 aa
AA seq
DB search
MGFLHQLQLLLWKNVSLKRRGPWVLAFEIFIPLVLFFILLGLRQKKPAIPVKEVSFYSAA
PLTSAGIIPIMQSLCPDGQRDEFGFLQYKNSTVTQLLERIREVVLQNHLFTADRPGLGQE
LESLQQHLESLSTSAGPYPLDNNFNTSQGFTVASVLKNQSVFHQFLVRNLSLPNDTASLL
LSTPVNLKEVFNLIFGLYPRTGGGSSHSSGGEKETTHTPAEKILQLEEKMLGVMQSLDGG
LIHKALRDPTKAAHRQALLKLMSQALGLAGGGAGQRYDPQGLKEVEGVLLTGAMLEMLTC
GEDGTSELSKILLVPEKQQSLLQAYRSTACGGGAGQRTERFGEMSQELREQIDTQSLIDK
LRLEPANSSAPLSQSHLGALLKDLADVEKLLRDVDLLSGLARLLPKGACAGHVPPGAPAN
TTTSWSLNATTWGPNTTENPWEEGGEEGRGREKENVKEENPHSFSTFVQLWAGLQPILCG
NNRIIEPEALKQGNMSSLGFTSKEQRNLGLLVHLMTTNPKILYSPIGSQVDKVIQKANET
FAFVGNVTHYARVWLNISAQLRTYLEEGKLHHHLAWMQQLTSDLRGHPELLNGTDSDLLR
GLLEGNYTLPNTSTLLEQLDTIDNAACGWTHFMSKVSVDIFKGFPDEDSIVNYTLNQAYH
DNISVFASVIFQTNLDGSLPPHVLYKIRQNSSFTEKTNEIRRAYWRPGPNTGGKFYFLYG
FVWIQDMMERAIINTFVGHDVVEPGNYVQMFPYPCYTRDDFLFVIEHMMPLCMVISWVYS
VAMMIQHIVAEKEHRLKEVMKMMGLNNAVHWVAWFITGFVQLSISVTALTAILKYGRVLL
HSDIFIIWLFLSIYAIATIMFCFLVSVIYSKAKLASACGGIIYFLSYVPYMYVAIREEVA
HDKITAFEKCIASLMSTTAFGLGSKYFALYEVAGVGIQWRTINQSPVEGDDFNLGLSMMM
LIIDASVYGVLTWYIEAVHPGMYGLPRPWYFPLQKSYWLGSGRVETWECPWGGGARLSVM
EEDQACAMEHRRSGRAKPDLELEEMRGIEEEPSHLPLVVCIDKLTKVYKMGNKLALNKLS
LNLHENQVVSFLGHNGAGKTTTMSILTGLFPPTSGSATIYGHDIRTDMERIRQNLGMCPQ
HNVLFDKLSVEEHLWFYSKLKGMAEEDIRKEMDKMIDDLELNNKRHSLVQTLSGGMKRKL
SVAIAFVGGSRAVILDEPTAGVDPYARRAIWDLILKYKQGRTILLSTHHMDEADLLGDRI
AIISHGRLKCCGSPLFLKSTYGDGYKLTLVKKQSESGDQVTQPQPPSTVSSSSLSPSSSS
LSPCSETRVTQFIRQFVGSCLLLSDSNTELSYVLPSEAVKKGCFERLFQALEQNLSILAL
TSFGVMDTTLEEVFLKVSEEDQSLENSDADMKDSLGGISVGKPAAAVGVGGSGKPEPGAP
AGSSSSVERPEVELSNLVMCSRLSQSQSSLRSSSSLGSVLGDEEGLYADFYGDYCRLFDH
GRDPHSTSLREDVEEASPEPVVLEGQGSFKLEGWWLKLRQFHGLIVKRFHCAKRNTKGLF
SQILLPAFFVCVAMTVALSVPSIGDLPPLILSPSQYHNYTQPRGNFIPYANEDRPQYRSN
QSPDASPQKIANTLRLPSGVGATCVLKTPFNSTLDQLAQTLNPSANNSKTLAARYFDSMC
LDSFTQGVPLSNFVPPPPSPAPSDDPDTHFEDGLWNFTATTPTTVRETVTSPPTLPLFIR
ELVRCICSMQGTGFSCPSGVGGRPPLMKVVTGDILVDITGRNVSEYLLYTSDRLRLHRYG
GLTVGNIQKSVPASFGKKTPPMVRKIAVRRSAQVLFNNKGYHSMPTYLNVLNNAILRANL
PPGKGNPAAYGITLTNHPMNRTSASLSLDYLLQGTDVVIAIFIIVAMSFVPASFVVFLVA
EKSTKAKHLQFVSGCDPVIYWLANYIWDMLNYLVPATCCVLILFVFDLPAYTSPTNFPAV
LSLFLLYGWSITPIMYPASFCFEVPSTAYVFLIVINLFIGITATVATFLLQLFEHDKDLK
LVNSYLKSCFLIFPNYNLGHGLMEMAYNEYINEYYAKIGQFDKIKSPFEWDIVTRGLVAM
TIEGFVGFFITILCQYNFLRKPLRVPVSSQLIEDDDVDVACERRRVLRGDADNDMLKIDN
LTKVYKSRKMGRILAVDRLCLGVRPGECFGLLGVNGAGKTTTFKMLTGDESTTGGEAFIG
GNSILRELLRVQQSIGYCPQFDALFEDLTAREHLELYTRLRGIPWKDEQRVVSWALEKLE
LSKYADKPAGTYSGGNKRKLSTAIALIGYPSLIFLDEPTTGMDPKARRFLWNLILDIIKT
GRSVVLTSHSMEECEALCTRLGIMVNGRFKCLGSIQHLKNRFGDGYMITVRTKTSSNVKE
VVRFFNRNFPEAVLKERHHTKVQFQLKSDRISLAQVFSKMEQVVGVLGIEDYSVSQTTLD
NVFVNFAKKQSDNLEQQESSPPGGGQSPLQRLLTLLRPRPANTELSALVSEEPEELESDD
DEGLISFEEERVQLSFNTDTVC
NT seq
7629 nt
NT seq
+upstream
nt +downstream
nt
atgggattcctccaccagctacagcttctgttgtggaagaatgtgtctttgaagaggaga
ggaccgtgggtgttggcctttgagatcttcatccctttggtcctcttcttcatcctgctg
ggcctgcgccagaagaaacctgccatccccgtcaaggaagtctccttctacagcgcagct
cccctcacctcagcaggcatcattcccatcatgcagtctctgtgtcccgatggccagagg
gacgagtttggcttcctacagtacaagaactccactgtcacccagttgttggagcggatc
cgtgaggtggtgttacagaaccacctgttcacagcagacaggccaggactgggccaggag
ctggagtccctacagcaacacctggagagcctcagcacatcagcagggccctacccactg
gacaacaatttcaacaccagccaagggttcacagtagccagtgtgttgaagaaccagtca
gtgttccatcagttcctggtcaggaatctgtctctccccaatgacaccgccagcctgctg
ctctccactcctgtcaacctcaaagaggtattcaacttgatctttggcctgtaccccaga
actggaggggggagtagtcacagttctggaggggaaaaagagaccacacatacccctgca
gagaagatacttcaactggaggagaagatgctgggagtcatgcaaagtctggatggtgga
ctgatccacaaagctttacgagacccaaccaaagcagcccatcggcaggccctactcaaa
ctcatgtcccaggctttaggcctagcaggaggaggggcaggccagagatacgacccccag
ggactgaaggaggtggagggtgttctcctgactggtgccatgttggaaatgcttacctgt
ggggaggatgggactagtgagctgagcaagatcctattggttcctgagaagcagcagtcc
ctgctccaggcctatcgcagtacagcatgtggaggtggggcgggacaaaggactgagcgc
tttggagagatgagccaggagctccgagagcagatagacacacagagcctcattgacaag
ctgcgtctggagccagccaactcctcggcccctctgtcccagtcccacctgggtgctctg
ctgaaggacttggctgacgtggagaagctcctcagggatgtagacctgctgtcaggcctg
gctcgcctgctccccaagggggcctgtgctggccacgtcccccctggggctccagccaac
accaccacttcctggtccctcaacgccaccacttgggggcccaacaccaccgagaacccc
tgggaggagggcggagaggaggggagaggacgagagaaagagaatgtgaaagaagagaac
cctcactcgttttctacctttgtgcagctgtgggcagggctgcagcctattctgtgtggg
aacaacagaatcattgagccagaggctttaaagcaagggaatatgagctctctgggcttt
accagtaaagagcagcgcaatctgggcttactagtgcatctgatgactacaaatcccaag
atcctctactcccccatcggctcacaggtggacaaagtcattcagaaggccaatgagaca
tttgcgtttgtggggaacgtgactcactacgcccgggtgtggctcaacatctctgcccag
ctcaggacttatctggaggagggcaagctgcaccaccacttggcctggatgcagcagttg
acctctgacctacgtggtcacccggaactgctgaatgggacagacagtgatctgctgcgt
gggttgctggagggcaactacaccctgcccaacacctccaccctgctggagcagctggac
accattgacaacgccgcctgtggctggacacacttcatgtccaaggtcagtgtggatatc
ttcaagggttttccggatgaggacagcatcgtcaactacacactgaaccaagcttaccat
gataacatctcagtgtttgccagtgtgatattccagaccaacctagatggctccctgcct
cctcatgtcctctataagatcaggcagaactccagcttcacagagaaaaccaacgagatc
cgccgggcctactggcgcccagggcccaacacggggggaaagttctatttcctctacggc
tttgtgtggatccaggatatgatggagagagccatcattaacacgtttgtgggccatgac
gtggtggagcctggcaactatgttcagatgttcccttacccctgctacacaagagacgac
ttcctgtttgtgatcgagcacatgatgcctctgtgcatggtgatctcctgggtctactct
gtagccatgatgatccaacacattgtggcggagaaggagcaccggctcaaagaggtgatg
aagatgatgggcctgaacaacgcggtccactgggtggcctggttcatcactgggtttgtc
cagttgtccatctcagtgacggccctgacggccatcctgaaatacggtcgggtgctcctc
cacagcgacatcttcatcatctggctcttcctctccatctacgccatcgccaccattatg
ttctgcttcctggtgtcagtgatctactccaaggccaagctggcgtcagcgtgtggtggg
ataatctacttcctcagctatgtcccatacatgtacgtggccatcagagaggaggtggcc
catgacaagatcacggccttcgagaagtgtatcgcttctcttatgtcgaccacagcgttc
ggcctgggctctaagtactttgccctgtacgaggtggctggggttggtatccagtggcgc
accatcaaccagtcacctgtagagggcgatgacttcaaccttggcctgtccatgatgatg
ctcatcatcgatgctagtgtgtatggagtactcacctggtacatagaggctgtgcatcca
gggatgtatgggctgcctcggccgtggtacttccccctgcagaagtcctattggctgggc
agtgggcgtgtggagacatgggagtgtccctgggggggaggggccaggctgagtgtcatg
gaggaggaccaggcgtgtgccatggaacaccggcgatctggtagggccaagcctgacctt
gaacttgaggagatgcgtggtattgaagaggagcccagccacctgcctctggtggtttgt
atagacaagctgaccaaggtctacaagatgggcaataagctggccctcaacaagctgagc
ctcaacctccacgagaaccaggtggtgtccttcctgggacacaacggagccggcaagacc
accaccatgtctattctgacaggtctgttcccgcccacctctggctcagccaccatctac
ggccatgacatccgtactgacatggagcgtatcaggcagaacctgggcatgtgcccccag
cacaatgtgctctttgacaagctcagcgtggaggagcacctgtggttctactccaaactc
aaaggcatggccgaggaggacatccgcaaggagatggacaagatgatagacgatctagag
ttgaataataagcgtcacagcctggtgcagactctgtctgggggaatgaagaggaagctg
tccgtggccatagcgtttgtgggcggctcccgggccgtcatcctggatgagcctacggcg
ggggtggacccctacgcacgcagagccatctgggacctcatcctcaagtacaaacagggt
cgcaccatcctgctgtccacccaccacatggatgaggctgacctgttaggagaccgcata
gccatcatctcccatgggagactcaagtgctgcggctccccactctttctcaagagcacc
tacggagacggctacaaactcaccctggtcaagaaacagagtgagagcggagaccaggtc
acccagccccagcctccctccaccgtgtcctcctcctccctgtccccctcctcctcctcc
ctttctccctgctcagagacccgggtcacccagttcattcgtcagtttgtggggtcctgt
ctgctgttgtctgactccaacactgaactatcctatgtgttgccctctgaggctgtcaag
aagggctgcttcgagaggctatttcaggcattggagcaaaatctgtccatcttggctctg
accagcttcggggtgatggacaccactctggaggaggtcttcctcaaggtgtcggaggag
gatcagtccctggagaacagtgatgccgacatgaaggattccctaggcggtatctcagtg
gggaaacctgctgccgcggtgggtgtggggggctctggaaagccagagccgggggctcct
gcggggagcagcagcagtgtggagagaccagaggtagagctctctaacctggtgatgtgc
tccaggctcagccagagccaatcctccctgcgctcctcctcctccctggggtccgtgctg
ggggatgaggaagggctctacgcagacttctacggagactactgccgcctcttcgaccac
ggacgggaccctcactctaccagcctgagggaggacgtggaggaggcctcccctgagcct
gtcgtcctggaggggcagggcagcttcaagctggagggctggtggctgaagctacgccag
ttccacggcctcatcgtcaagaggttccactgtgccaagaggaacaccaagggcctcttc
tcacagatcctgctgcccgcattcttcgtctgcgtggccatgactgtagcgctctctgtg
ccttccatcggagatctgccaccactgatcctgtccccatcccagtaccacaactacacc
cagccccgtggcaacttcatcccctacgccaacgaagaccgcccacagtacaggagtaac
cagtccccggatgccagccctcagaagatcgccaacacgctgcgtctgccatcgggcgtg
ggcgccacctgcgtcctcaaaacgcccttcaacagcaccctggaccagctggcacagacg
ctcaaccccagcgccaacaacagcaagaccctggccgcccgctactttgactccatgtgt
ctggactcctttacccagggagtgccactgtccaacttcgtaccccctcccccctcgcca
gccccctccgatgaccccgacactcactttgaggatgggctgtggaacttcactgccacc
actcccaccactgtcagggaaacggtgacgtctcctcccaccctgcccctgttcattcgg
gagctggttcgttgtatctgctccatgcaggggacgggcttctcctgccccagcggggtg
ggggggcggccgccccttatgaaggtggtcacaggggacattctggtagacatcactggg
cgcaacgtgtcagagtatctcctctacacctctgacagactgcgcctgcacagatatgga
ggactcacagtaggcaacatacagaaatcagtcccagcatcctttgggaaaaagactccg
cccatggttcgcaaaatagcagtccgccgatcagctcaggtgctgttcaataataaaggg
taccacagcatgccaacctatctcaacgtcctcaacaatgccatcctgcgtgccaacctg
cctccaggcaagggcaaccctgctgcatacggaatcacactgaccaaccaccccatgaac
cgtaccagtgcaagcctctctctggactacttgctccagggcactgatgtggtgatagct
atcttcatcatcgtggccatgtcctttgtaccagccagctttgtggtctttctggtggca
gagaagtcgaccaaggccaagcacctgcagtttgtgtctggatgtgaccctgtcatctac
tggctggctaactatatatgggacatgttgaactacttggtgcctgccacgtgctgtgtc
cttatcctgtttgtctttgaccttcctgcgtacacatccccaaccaacttccctgcggtc
ctgtctctcttcctcctctatgggtggtctatcactcctatcatgtacccggcctccttc
tgtttcgaggtgcccagcacggcctatgtgttcctcatcgtcatcaaccttttcataggc
atcactgccacagtggccaccttcctgctgcagctctttgagcatgacaaggatctgaaa
ctggtgaacagctacctaaagtcctgtttccttatcttcccaaactacaacctgggtcac
ggcctgatggaaatggcttacaatgaatacatcaatgagtactatgctaaaataggtcag
tttgacaagatcaagtctccatttgagtgggacattgtgactcgagggctggtagccatg
acaatcgagggctttgtaggattcttcatcaccatcctgtgtcagtacaacttcctcagg
aaacccttgagagtaccagtgagcagccagctcatagaggatgatgatgtggatgtggcc
tgtgagagacggagagtactgagaggagatgctgacaacgacatgctgaagattgacaac
ctcaccaaggtgtacaagtcgaggaagatgggtcgtatcttggctgttgaccggttgtgt
ctgggcgtgcgtcctggggagtgttttggcctcctgggggtgaacggagcagggaagacc
accacctttaagatgctgactggtgacgagagcaccacgggaggggaggccttcataggg
ggaaacagtatcctgagggagctgttgagagtgcagcagagcattggttactgccctcag
tttgatgccttgtttgaagacctgacagccagagagcacctggagctgtacacacgcctc
cgaggcatcccctggaaggacgagcagagggtggtctcatgggccctagagaaactggag
ctctccaaatatgcagacaagcccgctggcacctacagtgggggaaacaagcgcaagctg
tctactgccatcgccctcatcggatacccctctctcatcttcctggatgaacctactaca
gggatggaccctaaggcccgcagattcctctggaacctcatccttgatatcatcaagacg
ggacgctctgtggtgctgacgtcacacagtatggaggagtgtgaggctctgtgcaccaga
ctgggcatcatggtcaacggcaggttcaaatgcctgggcagcattcagcacctcaagaac
aggtttggtgatggttacatgatcacagtgcggactaaaaccagttccaatgtgaaggag
gtggtgagattcttcaacaggaatttccctgaggctgtactaaaggagcgccaccacacc
aaagtccagttccagctgaagtccgacaggatctccctggcccaggtgttcagtaagatg
gagcaggtggtgggggtgctggggatagaggactactctgtcagccagaccacactggac
aatgtgttcgtgaactttgccaagaagcaaagtgacaacctggagcagcaggagagttcc
ccccctggtggaggccagtcacccctgcagcgcctgctcaccctgctgaggccccggccg
gccaatacggagctcagcgccctggtcagcgaagagccggaggaactggagagtgacgac
gatgagggcctcatcagctttgaagaggagagggtgcagctctcctttaacacagatact
gtctgttga
DBGET
integrated database retrieval system
