Oncorhynchus gorbuscha (pink salmon): 124034106
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Entry
124034106 CDS
T07892
Name
(RefSeq) synaptobrevin homolog YKT6-like
KO
K08516
synaptobrevin homolog YKT6
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04130
SNARE interactions in vesicular transport
ogo04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
124034106
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
124034106
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124034106
Membrane trafficking [BR:
ogo04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Ykt6
124034106
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Gene cluster
GFIT
Motif
Pfam:
Longin
Synaptobrevin
SLM4
Motif
Other DBs
NCBI-GeneID:
124034106
NCBI-ProteinID:
XP_046202806
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All DBs
Position
LG04:complement(43238005..43242722)
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AA seq
198 aa
AA seq
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MKLYSLSVLHKGATKSNLLKSAYDLSSFSFFQRSSVQEFMTFTSALIVERSAHGSRASVK
EQEYLCHVYVRNDSLSAVVIADSEYPQRVAFTLLDKVLEEFSRQVESIDWPSGNPDTINY
KALDIHLAKYQNPREADAMTKVQAELDETKIILHNTMESLLERGEKLDDLVQKSEHLGNQ
SKVFYKTARKQNSCCEVM
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgtacagcctaagcgttctccacaaaggagcgactaaatccaatctcctcaaa
tccgcatatgacctctcctccttcagtttcttccagcgctccagtgtccaagagttcatg
accttcaccagcgccttgattgtggagcgttctgcacacggcagccgagcctcagtcaaa
gaacaagagtacctgtgccatgtgtatgtgaggaatgacagtctgagtgcggtggtgata
gcagacagcgagtacccccaaagagtcgccttcacactactagacaaagtgctagaggag
ttctccaggcaagtggaaagtatagactggccatctggaaacccagacaccatcaactac
aaagccctggacatccacctggccaaataccagaaccccagagaggcagatgcgatgacc
aaagtgcaggctgagctagacgagacaaaaatcattttgcacaacaccatggagtctctg
ttggagagaggggagaagctggatgacctggtgcagaagtctgaacacctggggaaccag
tctaaagtcttttataagactgcacggaagcagaactcatgctgtgaggtcatgtga
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