Oncorhynchus gorbuscha (pink salmon): 124034244
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Entry
124034244 CDS
T07892
Symbol
tfip11
Name
(RefSeq) tuftelin-interacting protein 11
KO
K13103
tuftelin-interacting protein 11
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ogo03041
]
124034244 (tfip11)
Spliceosome [BR:
ogo03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
124034244 (tfip11)
Other components
Complex C specific factors
124034244 (tfip11)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
124034244
NCBI-ProteinID:
XP_046203106
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Position
LG04:complement(51901023..51908804)
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AA seq
843 aa
AA seq
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MSMSHLYGRQGEEEDEGVEVEKFEVTEWDLANEFNPERRRHRQTKEEAVYGIWAERGDSD
DERPSFGGKRSKDYSAPVSFVSAGLRKSAAEENQQQQQQIDGGSDDSDNDNTPPAQPPPR
DTAPKKLQTGGHFRGNSQSQRTGFAAGIRAGGDLGTWEKHTKGIGQKLLQKMGYVPGKGL
GKNAQGILNPIEAKLRKGKGAVGAYGNERTKQSLQDFPVVDSEEEEEKEFQRELGQWRRD
PAGGGGKKKPKYSYRTVEELKAKGKLAGRTTQTPAGELAQVKVIDMTGREQKVYYSYSQM
TNKLSVPEEAPLSVATREQKTSGFALPELEHNLQLLIDLTEQDILQSSRRLQHERDVVVT
LSHESSGLQTRLGTERDAIQRLEAVLQLVDRFQSGETAPGVGPSLQECAGVFETLQSEFY
EEYKTLGLGDLAAAVVHPLLREKLRTWDPLKDSSYGLEEVGQWRAILESDQLHHANAPEA
HMDPYHRLLWEVWIPVLRVCVSGWQPRMVGPMVDCVEVWAPLLPLWILNHLLEQLLFPRL
QREVDSWNPLTDTVPIHSWLHPWLPLLQSRLEPLYPPIRSKLANALQRWHPSDGSARLIL
QPWRDVFTPGAWEAFMVKNIIPKLALCLGELVINPHQQQMEPFNWVLDWEGMLSPSSLVS
LLDKHFFSKWLQVLCSWLSNSPNYEEITKWYLGWKSIFSDAVLAQPLVKDKFNEALDIMN
RAVSSGLGGGYMQPGARENIAYLTHTERRKDFQYEALQERRDAESVAQRGIGASLPTNFK
DLIQTKAEENNIVFMPLVAKRHEGKQLYTFGRIVIYIDRGVVFVQGEKTWVPTSLQSLID
MAK
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgtcccacctgtacggacggcagggagaggaggaggatgagggggtggaggta
gagaagtttgaggtgacagaatgggacctggccaatgagtttaacccggagcgtcgcaga
cacagacagaccaaagaggaggccgtctatggcatctgggcagagaggggagactccgac
gatgagagacccagcttcggagggaagaggtctaaggactactctgcccctgtgagtttt
gtgagtgctgggctacgcaagtctgcagcagaggagaatcaacaacaacagcagcagata
gatggagggtcagatgactctgacaatgacaacactccccctgcccaacccccaccccgc
gacactgcacctaagaaactgcagacgggtggtcatttccgtggcaatagccagtcccag
aggacggggtttgcggccggtatccgagctggaggagacttgggcacttgggagaaacac
accaaggggattggccagaaactcctccagaagatgggctatgtaccagggaaaggactg
gggaaaaacgcccagggtattttgaatcccattgaggcaaagcttcggaagggaaagggg
gcggtgggcgcctacggcaacgagagaaccaaacagtcactacaggacttccctgtggtt
gactccgaggaggaggaggagaaggagttccagagggaactaggtcagtggcgtagggac
cctgcaggtggtggagggaagaagaaaccaaagtattcctacaggactgtagaggagctg
aaggctaaaggcaagctggctggacggaccacacagacacccgctggagaactggctcaa
gtcaaggtgatagatatgacaggcagggaacagaaggtgtattacagctacagtcagatg
actaacaaactcagtgtaccagaggaggctccactgagtgtggccacacgtgagcagaag
acgtctggctttgccctgccagaactggaacacaacctgcaactactgatcgacctgacg
gaacaagacatactacagtcctcacggcgtctgcagcatgagcgtgacgtggtggtgact
ctaagccacgagagctccggtctgcagacgaggctcgggacagaacgggatgccatccag
aggctagaggcagtactgcagctggtggatcgctttcagagcggggagactgcacccggg
gtaggacccagcctgcaggagtgtgctggtgtttttgagactctacagagtgagttctat
gaggagtacaagactctaggtttgggagatctggctgcggctgtagtacatccactactc
cgagagaaactacgcacatgggatcctctcaaggacagttcatatggtctggaggaggtg
ggtcagtggcgagccatcctggagtctgatcagcttcaccacgccaacgcccctgaagca
cacatggacccataccacaggctgctgtgggaggtgtggatccctgtgctgcgagtgtgt
gtgtcggggtggcagcctcgcatggtaggacccatggtggactgtgtggaggtctgggcc
cctctgctgcccctctggatactaaaccacctcctggaacaactcctcttccccaggctg
cagagagaggtggatagctggaaccccctgaccgacacagtgcccatccactcctggctc
cacccctggctgcctctgctccaatcacggctggagcctctctacccacccatccgcagt
aaactggccaatgcgctgcagcgctggcacccgagtgacggctccgcccgcctcatcctc
caaccatggagagacgtgttcacgcccggtgcctgggaggccttcatggtcaaaaacata
atccctaaactagctctgtgtctgggggagctggtaataaatcctcaccagcagcagatg
gagccgttcaattgggtgttggactgggagggcatgctgtctccctctagcctcgtatca
ctgctggacaaacacttcttctccaagtggctacaggtgctgtgttcgtggctcagtaac
agtcctaactatgaggagattacaaagtggtacctaggctggaagtccatattcagtgat
gctgttctggctcagccactcgttaaggacaagttcaacgaagctctggacatcatgaac
cgcgctgtctcctctggccttggtggggggtacatgcagcctggtgcccgtgagaacata
gcatacctcacacacacagagcgtcgtaaagacttccagtacgaggctctgcaggagcgc
cgggatgctgagagcgtggcgcagcgaggcatcggtgccagcttgcccaccaacttcaaa
gacctgatccagaccaaggctgaggagaacaacattgtcttcatgccgctggttgccaaa
cgccacgagggcaaacagctgtacacctttggacgtatcgtcatctacatagacagagga
gtggtcttcgtacagggagagaagacctgggtccctacatccctacagagtctcatagat
atggccaagtga
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