Oncorhynchus gorbuscha (pink salmon): 124034316
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Entry
124034316 CDS
T07892
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-1-like isoform X1
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
124034316
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ogo04040
]
124034316
Ion channels [BR:
ogo04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
124034316
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Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
DUF2894
Motif
Other DBs
NCBI-GeneID:
124034316
NCBI-ProteinID:
XP_046203292
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Position
LG01:19871304..19881310
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AA seq
859 aa
AA seq
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MPKQQQQNQDLELDRLVRQVPLQHHPPTRSPSPSSPNRTLELPNVPSYPRLPPISLSRQL
SGLFNPTFHIEDDPTSALPSVSSRLSVHPAVSVEDVDSGGEGGGGGGEHHRHHIPQILTL
QDPNFKTLTVPGVSKTSRQCKVAEKDEKKPKNIWTNIKKLYSQSEEDEEEIEIAVRAWPS
QSSILSGDDGLKERPASSASQASYVVNERLQELVKMFKERTERAKEKLIDPDHSDDDSPT
ASPARAPTPPPAPPEEPKEEEEIKEQQPKPTLCCKVMPPRWIRALLHYRFPASIDPFTNL
VYVLWLFFVTLAWNWNMWLIPVRWAFPYQTPSNIYLWLLTDYLCDFIYILDILVFQPRLQ
FVRSGDIVFDKKDMRVNYMKTFRFKMDVISLVPLELFYFKTGINPLLRFPRLLKIMSFFE
FNDRLEGILTKAYVYRVIRTTTYLLYCLHCNACLYYWGSAYEGLGSTQWVYDGQGNSYIR
CYYFAVKTLITIGGLPDPTTLFEIIFQLINYFVGVFAFSIMIGQMRDVVGAATAGQTYYR
ACMDNTVKYMASYRIPKDVQNRVKTWYNYTWQSQGMLDEQELLVQLPDKMRLDIAVDVNY
DIVSKVSLFQGCDRQMIFDMLKRLRSVVYLPGDYVCKKGEVGREMYIIKAGEVQVVGGPD
GKTVFVTLRAGSVFGEISLLAVGGGNRRTANVVAHGFANLFILDKKDLNEILVHYPESQK
LLRKKARKMLMKDKKPPKEPAQVIPPRTVTPKLFKAALDVAHQKTGLKGTLAKIKEKINK
SSVSLQPSMSSLPPLSPVSPVSSLDPERKADATSPTLDSSTLLCPVSHCHGDETLSKEQG
QVEGEVAGESGKKKEKRKA
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atgcctaagcagcagcagcaaaaccaggacctggagttggaccgcctggtccgccaggtc
cctctccaacaccaccctccgactcgcagcccctcaccgtcctcccccaacaggacccta
gagctgcccaacgtgccctcctacccccgcctgccacccattagcctgtccaggcagctg
tcagggcttttcaaccccaccttccacattgaggatgaccccacgtccgctctaccctca
gtgagctccaggctcagtgtgcacccagctgtcagtgtggaggatgtggattccggcgga
gagggagggggtggcggaggggagcaccaccgccaccacattccccaaatccttacccta
caggaccccaacttcaagaccctgaccgtacccggagtgtccaaaaccagccgtcagtgt
aaagttgctgaaaaagatgagaagaaacccaagaatatctggaccaatataaagaagttg
tactctcagagtgaggaggatgaagaggagatcgagattgcagtgagggcatggcctagc
cagtccagcatcctcagtggagacgatgggctaaaggagcgccctgcgtcttccgctagc
caggccagctacgtggtgaacgagcgcctacaggagctggtcaagatgtttaaggagagg
acagaaagggccaaagagaaactcatagacccagatcactctgatgatgacagtccaact
gcctcccctgcgagagctccaacaccacctcctgctcctccagaggagccgaaggaggag
gaggagataaaggagcagcaacccaagcctacattatgctgcaaggtgatgcctcctcgc
tggatcagagctctgctgcactaccgcttccccgctagcatcgaccccttcaccaatctg
gtctatgtgctgtggctgtttttcgtcaccttggcgtggaactggaacatgtggcttatc
ccggtgcgctgggccttcccctaccagacccccagtaacatctacctgtggctactcact
gactatctgtgtgacttcatctacatcctggacatcctggtcttccagccccgcctgcag
tttgtccgcagtggagacatagtgtttgacaaaaaggacatgagagtgaattacatgaaa
accttccggttcaagatggatgtcatcagtcttgttccactggagttgttctattttaaa
actgggatcaacccactcctccgcttcccacgactactaaagataatgtctttctttgag
ttcaacgaccgtcttgagggcatccttaccaaagcctacgtttacagagtgatccggacc
accacctacctgctgtactgcctgcactgtaatgcctgtctgtactactggggctctgcg
tatgaaggtctgggctccacgcagtgggtctatgacggacagggcaacagttacatccgc
tgctactactttgctgtgaagaccctaatcaccattggtggactgccggaccccacaaca
ctctttgaaatcatctttcagctcataaactactttgttggagtgtttgccttttccatc
atgattggacagatgagagatgtggttggtgcagccacagcaggacagacgtactacaga
gcatgcatggacaacactgtcaaatacatggcctcctaccgtatccctaaagacgtgcag
aaccgggttaaaacctggtacaactacacctggcagtcccagggcatgctggatgaacag
gagcttctggttcagctcccagacaagatgaggctggacatcgctgtggatgtcaactat
gacattgtcagtaaagtgtctctcttccagggttgcgatagacagatgatctttgacatg
ctgaagagactgaggtctgttgtgtacctcccaggggactatgtctgcaaaaagggtgaa
gttgggcgggaaatgtacatcatcaaagccggcgaggtgcaggtggtgggcgggccagac
gggaagactgtgtttgtcacactgagggcggggtcagtgtttggggaaatcagcttgctg
gcagttggtggagggaacaggagaacagcaaacgtggtggctcatggcttcgccaacctg
ttcatcctggacaagaaggacctcaatgagattctagtgcattaccccgagtcccagaag
ctactccgcaagaaggccaggaagatgctcatgaaagataagaagcctccgaaggagccg
gcccaggtgatccctcctcgaacggtcacgcccaagctattcaaagctgctctggatgtg
gcgcatcagaaaacaggcctcaaagggaccctcgccaagattaaggagaagatcaacaaa
tccagcgtttctctacagccctccatgtcctccctgcctcccttgtccccagtctctcca
gtctccagtctggacccagagcgcaaggctgacgccacgtcaccaaccttagacagctcc
acgctgctctgccccgtctcccattgtcacggagatgagacactctccaaggagcagggc
caagtggagggagaagttgcaggagagagtgggaagaagaaagaaaagagaaaggcatga
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