Oncorhynchus gorbuscha (pink salmon): 124034321
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Entry
124034321 CDS
T07892
Name
(RefSeq) PDZ and LIM domain protein 2-like isoform X1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
124034321
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ogo04990
]
124034321
Domain-containing proteins not elsewhere classified [BR:
ogo04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
124034321
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GFIT
Motif
Pfam:
PDZ
DUF4749
PDZ_6
LIM
PDZ_2
Ogr_Delta
Motif
Other DBs
NCBI-GeneID:
124034321
NCBI-ProteinID:
XP_046203303
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Position
LG04:55886901..55946772
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AA seq
408 aa
AA seq
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MMIPPISFISRGSNQVGDKRQTLQGLSRQWVATSGHVMALTVNLIGPSPWGFRIYGGRDF
KKVITVSKVNGGSKAELAALQPGDVILEINGENTVDMLNVEAQNKIKNSKTQLQMLVERP
EPPIPEQTNGTTTPEQLTGRFQEAVLVSRDENQNYRGYSISSPASLSPGLYSPEAPSSPE
GKRERLTPTGTKSIQLRSWSPEEKTSSHRLSRPLAQEFSSPDFRTNSVTSRTPTPPGHYS
PHSPIDRELSVSPRRSSGSDFAMQRFDRDSEVYKMIQENKESRTAPRQSNTFRMLQEVLE
SDEKEATVRFPGLSPKPTPPIPTSPGGGVPKYHTCEKCGTSIVTQAVRIMDDRFRHPECY
TCSTPECGLNLKMRGHFWVGEEMFCEKHARENYQGLGTAPCATVSPHH
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgatgattcctcccatttcttttatatcaagaggatctaatcaagtaggagataaaagg
cagacgttgcagggtttgagcaggcagtgggtggcgacctctggtcacgtgatggcgctg
acagtaaacctgattggtccgtctccatggggctttagaatatacggaggaagagacttc
aagaaggtgataaccgtttccaaggtcaatgggggcagcaaggccgagttggccgccctg
cagcctggtgatgtcatcctggagatcaatggagagaacacagtggacatgctcaatgtg
gaggcccagaacaagatcaaaaactccaaaacgcagctgcagatgctggtggagaggcct
gagccccccatccctgaacagaccaatggaaccaccaccccagaacagctcactggacgc
ttccaggaggcggtgctggtgagtcgagatgagaaccagaactacagagggtactccatc
tccagcccagcctctctgtcacctggactctactccccagaggctccgtccagtcctgag
ggaaagagagagaggctcacacccaccggcaccaagagcatccagctgcgttcgtggtct
ccagaagagaagacatcgagtcacagactgtccagaccactggcacaggagttctcttct
ccggacttcaggactaactctgtgaccagccgaacccccacccctccaggacattactcg
ccccacagccctattgaccgcgagctgtctgtctcccccagacgcagttctggctcggac
tttgccatgcagcggtttgaccgggattcagaggtctacaagatgatccaggagaacaag
gagtctcgcacggcccctcgacagtccaacaccttccgcatgctgcaggaggttctggag
tctgatgagaaggaggcaactgtgcggttcccaggactctcgcccaaacccacccctccc
atacccacatcacccgggggcggagtccccaagtaccacacctgtgagaagtgtggcacc
agcattgttacacaggcggtgcgcatcatggacgaccgcttccgccacccagagtgctac
acctgttctacaccagagtgcggactcaacctgaagatgcgaggtcacttctgggtggga
gaggagatgttctgtgagaagcatgcccgcgagaattaccagggccttggcactgccccc
tgtgccaccgtctcaccccaccactga
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