KEGG   Oncorhynchus gorbuscha (pink salmon): 124034355
Entry
124034355         CDS       T07892                                 
Name
(RefSeq) probable cytosolic iron-sulfur protein assembly protein ciao1-B isoform X1
  KO
K24730  cytosolic iron-sulfur protein assembly protein CIAO1
Organism
ogo  Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:ogo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ogo03036]
    124034355
   03400 DNA repair and recombination proteins [BR:ogo03400]
    124034355
Chromosome and associated proteins [BR:ogo03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    124034355
DNA repair and recombination proteins [BR:ogo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     124034355
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_EML_2 Beta-prop_RIG_2nd Beta-prop_IFT140_1st ANAPC4_WD40 WDR55 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR35_TULP_N Beta-prop_WDR19_1st Beta-prop_IFT122_1st Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 Beta-prop_EML Beta-prop_Vps41 NBCH_WD40 eIF2A Beta-prop_HPS5 WDR90_beta-prop_4th Beta-prop_DCAF12 Beta-prop_SCAP B-prop_COPA_B_2nd Beta-prop_ELP1_1st Beta-prop_NUP159_NUP214 Ge1_WD40 RMC1_N Phage_tail_L
Other DBs
NCBI-GeneID: 124034355
NCBI-ProteinID: XP_046203399
LinkDB
Position
LG04:57810276..57826051
AA seq 335 aa
MNDTVALLQKFNAHPDSRCWYVAWNPKGTLLASCGGDRAIRIWGREGDSWECKTLLQDGH
QRTVRKVAWSPCGNYLASASFDATTCIWKKKNDDFECLTVLEGHENEVKCVAWAPSGNLL
ATCSRDKSVWIWEVDEENENEYECVSVVNSHTQDVKHVVWHPTQELLASCSYDNNVCVYK
EEDDDWECRATLKGHTSTVWGLTFDPSGQRLASCSDDCTVKIWKECQPQGGQEGTDAAWK
CVCTLSGFHGRTVYDIAWCPLTGALATACGDDGVRVFKEDDTADPDQPAFSLSAHVPKAH
TQDVNCIAWHPKEAGLLVSCSDNGEIAVWNYQSGV
NT seq 1008 nt   +upstreamnt  +downstreamnt
atgaacgacactgtggcccttctgcagaaattcaatgcgcatccagattcccgctgttgg
tatgtggcatggaaccccaaaggcacattgctggcatcatgcggtggtgaccgagccatt
cggatatggggaagggaaggtgactcttgggaatgcaagaccttgctccaggatggacac
cagagaactgtcagaaaggtggcatggtccccatgtgggaactacctggcctcagccagc
tttgatgccacaacctgcatctggaaaaagaagaatgatgattttgagtgcttgactgtg
ttggaaggacatgagaatgaggtcaaatgtgtggcctgggccccatccggtaacttgctg
gccacatgtagtagagacaagagtgtctggatctgggaagtggatgaggagaatgagaat
gagtatgagtgtgtgagtgtggtaaactctcatacacaggatgtcaagcatgttgtctgg
cacccaacacaggagctcctcgcctcatgtagctacgacaacaatgtgtgtgtctataaa
gaagaggatgatgactgggagtgcagggcgaccctgaaaggacacacctccactgtctgg
ggtttgacctttgacccaagtggccagcgactggcctcctgcagtgatgactgtactgtg
aagatctggaaagaatgtcagccacaaggtggacaggaaggcactgacgcggcttggaaa
tgtgtttgtaccctttcagggtttcatggacggacagtgtatgatattgcatggtgtcca
ctgacgggtgccctggcgactgcatgtggtgatgacggagtgcgtgtgtttaaggaggat
gacacggctgacccagaccagcctgctttctccctgtctgcccatgtacccaaggcccac
acccaggatgtcaactgtatagcctggcaccccaaggaggctgggctccttgtctcctgc
agtgacaatggggagatagcagtctggaactaccagtctggggtctga

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