Oncorhynchus gorbuscha (pink salmon): 124034386
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Entry
124034386 CDS
T07892
Name
(RefSeq) E3 ubiquitin-protein ligase DTX1-like
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
124034386
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ogo04121
]
124034386
Enzymes [BR:
ogo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124034386
Ubiquitin system [BR:
ogo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
124034386
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
WWE
zf-rbx1
WWE_5
zf-RING_UBOX
zf-C3HC4
zf-RING_2
zf-RING_Vps41
zf-RING_5
zf-ANAPC11
zf_RING_Vps8
PHD_NSD
ZNF512_C2HC
zf-UDP
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
124034386
NCBI-ProteinID:
XP_046203471
LinkDB
All DBs
Position
LG04:60311278..60362640
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AA seq
650 aa
AA seq
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MARPGSGVLVSVNGLGYPPQNLARVVVWEWLNEHGRWRPYNVTTCHHIENVLKGDAQGTV
VLGQVDAQLAPYVIDLQSMHQFRQDTGTMRPVHRNFYEPSSAPGKGVVWEWENDSGSWTP
YDMEICVTIQNAYEKQHPWLDLTSLGFCYLIDFNSMVQTNRQSQRKRRLRRRMDLAYPLI
MGSIPKSQSWPVGASSGQPCPCQQCILVNSTRAASNAILASQHRKLYGGATGPSGATGTL
TVVRQSNTFAGTTLWSPTSSAGTNNIQHNNISAGGGQAKAEQVQSLLSSANFPCSPALPS
LPPAHGHSHAHAHSHGHHAIINGQNNLNRPGTQRISMGTARGAIPPGVPPLPVKNLTVSG
PVHPAIAGITGILMCAAGLPVCLTRAPKPILHPPPINKSDMKPVPGVNGIRRKTKKKHLR
RGKNPEDVVRRYTEKVKVAPDEDCTICRERLVMSSGYEGVKGIKPEVVGKLGKCGHMYHL
LCLVAMYNNGNKDGSLQCPTCKAIYGEKTGTQPPGKMEYHVIPHCLPGYPEAKTIRIVYD
IPAGLQTTEHPNPGKKFSARGFPRHCYLPDNNKGRRVLKLLIMAWDRRLIFTIGTSSTTG
ESDTVVWNEIHHKTEFGSNLTGHGYPDPNYLDNVLTELSAQGVGQDNLKD
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atggcacggccaggctctggggtgctggtgtcagtcaacgggctggggtacccccctcag
aacctggcccgggtggtggtgtgggagtggctgaatgaacatgggcgctggcggccctac
aacgtgacaacttgccaccacatagagaacgtactgaagggggatgcgcaggggactgtg
gtccttggacaggtggatgcccaacttgccccttacgtcatagacctgcagtccatgcac
cagttcagacaggacacaggcaccatgaggccggtccacaggaacttctatgagccgtcg
tcggccccggggaagggtgtggtgtgggagtgggagaacgacagcggctcctggacgccc
tacgacatggagatctgtgtgaccatccagaacgcctatgagaagcagcacccctggctg
gacctgacctctctgggcttctgctacctcattgacttcaacagcatggtccagaccaac
cggcagagccagaggaaacgccgcctgcgccgacgcatggacctggcctaccctctcatc
atgggctccatccccaagtcccagtcttggcccgtgggagccagctccggccagccctgc
ccctgccagcagtgcatcctggtcaacagcacgcgggctgcctcaaatgccatcctggcc
tctcagcaccgtaagctgtatgggggggctaccgggccttcgggggctacaggcacgctc
accgtggtacggcagagtaacaccttcgctggaaccaccctctggtcccccacctctagt
gctggaaccaataatatacaacataacaacataagcgcaggaggaggccaagccaaagct
gaacaggtgcagtctctcctgtctagtgccaactttccatgttccccggcgctgccgtcc
cttccgcctgcacatggccactcccacgcccacgcacactcccacggtcaccatgccatc
atcaatgggcagaacaacctgaaccggccgggcacccagcgcatttccatgggcactgcc
agaggagccatcccaccaggggtccctcccctccctgttaagaaccttactgtctctgga
ccagttcacccagcaattgcaggtattactggtatcctgatgtgtgcggctggcctgcct
gtgtgtctgaccagggcccctaaacccattctgcacccgccgcccataaacaagagtgat
atgaagcctgtgcctggggtcaacggcatccgccgcaagaccaagaagaagcacctcagg
agagggaaaaacccagaggatgtggtgcggcgatacacggagaaagtgaaagtagcccct
gatgaggactgcaccatctgcagggagaggctggtgatgtcgtcaggctacgagggtgtc
aagggcataaagccagaggtggtgggcaaacttggcaaatgtgggcacatgtaccatctg
ctgtgcctggttgccatgtacaacaatggcaacaaggatggcagtctgcagtgccccact
tgtaaggctatctatggggagaagactggcacacagccccctgggaagatggagtaccat
gtcatcccccactgcctgcccggctacccagaggccaagaccatccgcatcgtctatgac
attcctgctggcctacagaccacagagcatcccaacccagggaagaagttcagcgctagg
gggttcccccggcactgctacctcccagacaataacaaaggcaggagggtcctgaagctc
ctgatcatggcgtgggaccgccgcctcatcttcaccatcggcacgtccagcaccacggga
gagtcagacacagtggtgtggaatgagatccaccacaagacagagtttggttccaacctg
acggggcacggctacccagaccccaactacctggacaacgttctgacagagctgtcagcc
caaggggtgggacaggacaacctgaaggactga
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