Oncorhynchus gorbuscha (pink salmon): 124034401
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Entry
124034401 CDS
T07892
Name
(RefSeq) RNA-binding protein Musashi homolog 1 isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
124034401
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogo03019
]
124034401
Messenger RNA biogenesis [BR:
ogo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
124034401
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
PHM7_cyt
NID
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
124034401
NCBI-ProteinID:
XP_046203509
LinkDB
All DBs
Position
LG04:60843538..60868207
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AA seq
373 aa
AA seq
DB search
MEMERSQSSLSSTDSPHDPCKMFIGGLSWQTTQEGLKEYFCKYGEVKECMVMRDPVTKRS
RGFGFVTFVDQAGVDSVSAVTRHELDSKTIDPKVAFPRRAQPKLVTRTKKIFVGGLSVNT
TIEDVKAYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVDKVCEIHFHEINNKMVE
CKKAQPKEVMSPMGSARGRSRVMPYGMDAFMLGIGMLGRGQHCFTQTQTHDCPFTIGYPG
FQAATYASRSYTGITPGYTYQFPEFHLERTPLLTSSHPPELTAIPLSAYGPMAAAAAAVA
RGSTPSRSGGFLGTSSPGPMADLYAAANQESAVSSYLSAASPSPSTGFGHSLGVRHSPYH
GPLIATAFTNGYH
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atggagatggaaaggagccagagcagcctgtcatccacggactcccctcacgatccatgc
aaaatgttcataggcggtctcagctggcagacgacacaagagggattgaaagagtacttt
tgcaagtatggcgaggtgaaagagtgcatggtgatgcgggatccagttactaagcgctcg
aggggttttggatttgtcacttttgttgaccaggccggtgtggattcagtttcggcagta
accaggcatgagttggattcaaaaacaattgatccgaaagttgcgttcccgcgtagagcc
cagcccaagctagtgactcggaccaagaagatttttgttggaggtctgtccgtgaacacg
accatcgaggatgttaaggcgtattttgaccagttcggaaaggttgacgatgccatgctc
atgtttgacaagaccaccaacagacacagaggatttggctttgtcacgtttgagaatgag
gacgtggtagataaagtgtgtgagatccacttccatgagataaataacaaaatggtggag
tgtaagaaggctcagcccaaggaagtgatgtcacccatgggctcggccagggggcgctct
cgggtgatgccctatggcatggacgctttcatgctgggtatcggcatgctgggcaggggg
cagcactgtttcactcaaacacagacccatgactgtcctttcaccataggttacccaggg
ttccaggcagctacatatgctagtcgaagttacactggcatcacccctggatatacctat
caattccctgaattccatttagagaggaccccccttctgacatcatcccacccccctgag
ctcacagccattcctctgtcggcatacggaccaatggcagcagcggcagcagcagtagct
agaggctccaccccctctcgttcaggagggttcctgggaaccagcagccctgggccaatg
gcagacttgtatgcagcagccaatcaagagtctgctgtcagcagctacctcagcgctgca
agcccctccccaagcactgggtttggccatagtctgggggtaagacacagcccttatcac
ggccctctgattgctacggctttcactaacggctatcactga
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