Oncorhynchus gorbuscha (pink salmon): 124034414
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Entry
124034414 CDS
T07892
Name
(RefSeq) homeobox protein cut-like 2 isoform X1
KO
K09313
homeobox protein cut-like
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogo03000
]
124034414
Transcription factors [BR:
ogo03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain CUT
124034414
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUT
Homeodomain
Homeobox_KN
DUF3095
Motif
Other DBs
NCBI-GeneID:
124034414
NCBI-ProteinID:
XP_046203556
LinkDB
All DBs
Position
LG04:complement(61283250..61413383)
Genome browser
AA seq
1551 aa
AA seq
DB search
MAADVGSMFQYWKKFDLRRLQRELNSVASELAGRQEESEHSHKHLVELSREFKRNVSEEV
REMVAPVLKSFQAQVVALNKRSKEAESAFLGIYKQLIEAPDPAPVLEATHTLEERLQQLQ
SSAPDSEALVREVSRHWRRHLECLNKPDDTEDGPAAASGAVEASSRTACVMTPKSKQAFR
AACSPQQIQSQTEGKAEDADTTLADRLGEAEERIKVLHSSLSTAKTDLLDLRCKYDQEKA
NKEEEVSVIMMNLEKANQKAEMAQRQVERLKEQLASARSTTPGSYNPPEGTSGERDEKGG
MLSSKLEAKLISKDREILRLLENVQRLQFSLQEVQDTSANQIISLEHQLAYKTEAIERLE
TKLQSQMDYDEIKTDLSILKVMKLASANGSSSQDSAKAAEALLLDKEAFLPSHKYLMDKA
RVLHNNDEDQSEESGRGGGRPTGSFFSVSQVDVRTSASPGPPTMEVSSSSYDLPRPFSVS
PCSVGRLSVDHVLHKQLLCSPLFKKEAGSPIMAFPTALYAAKAALMSTNQGPAGTGGIEA
GLPSDQSESGSSTAGDDDQLETADIAFQIKEQLLKHNIGQRVFGHYVLGLSQGSVSEILA
RPKPWRKLTVKGKEPFIKMKQFLSDEQNILALRTIQVRQRGSITPRIRTPETGSDDAIKN
ILEQAKKEIQSQRGGGSGTGYTSTLYSTVLGDMKSSLGSPSGRSSNGADSSSDDTIKNIL
EQARREMQAQQQALMEMEVCGRASATSAGPQVKRLGLPEPSKGLPLPTFIKQEEGGTVTM
CMANPISSPQTPLSVLSPAAFVQNIIRKVKSEIGEAGTYFDQHWSVERGPIGMVGGVGGG
SSQPFTSVSPSLSSSSSSGPSALPRLENGECLPNSEEASAAEEDTGSGMMQSVEVKVESD
VSVSGESTGRGMAYYPSYIPRTLKPTVPPLTPEQYEMYMYREVDTIELTRQVKEKLAKNG
ICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWLLDQLGQGLNQLPSQ
SLSQDKSPVTAQSSPSPPPSPEEIHSSPLVEPVSLTLESSKENQQPEGLVNPHPEGGKST
PSLLSLHQPHTPLGIQELVAMYPELDTYAITKKVKEVLTDNNLGQRLFGESILGLTQGSV
SDLLSRPKPWHKLSLKGREPFVRMQLWLNDPHNVDKLRDMKKMEKKAYLKRRYGLLSTGS
DSDSPSASSECVSPALVSIDLCPYSQVKKPRVVLGAEEKDALRKAYLLEPYPSQHTIEIL
ASQLNLKTNTVINWFHNYSRSRMRREVLMEGLQDNDTDAEHHSYSPSATQSPTSDGDERG
LLHPTGRTPHPILPLSANTSLPHVKQEASEGEEDEREGFNGQSKIQCFSMGVQFPQLKTE
HGDLIVGCQEPHLAPHYIQSLRQEEGMCSQAQGLFHGELSLDGPQRASQSRHEGDNSSKS
FVDPVSFKASSEPCRSSLEVSLNSPSAASSPGLMMSVSPVPSSSTPISPSLPNPPTTSTN
HSLDPNSLPPIQSPKPNKSVQRRTEKMANLNNIIHRLERAANREETLEWEF
NT seq
4656 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgatgtgggatcgatgtttcaatattggaagaaatttgatctacggcggctt
cagagggagttaaactcagtagcgtctgagctggcagggcgacaggaagagagcgagcac
tcgcacaagcacctggtggagctgagccgggagttcaagagaaatgtctcggaggaagtg
cgggagatggtggctcctgtcctcaagagtttccaagcccaggtggttgctctgaacaag
cgcagtaaggaggcagagtctgcattcctgggaatctacaagcagcttatcgaagcccca
gacccagctcctgtgctggaggccacacacaccctggaggagaggctgcagcagctgcag
agttcggccccagacagtgaggccctggtcagggaggtcagcaggcactggaggagacac
ctggagtgccttaacaagccagacgacacagaggacggcccagcagcagcatcaggagct
gtggaggcatcgagccggaccgcctgtgtgatgactcccaaaagcaaacaggccttcagg
gccgcatgctcacctcagcagatccagagtcagacagaggggaaggccgaagacgcagat
accactctggccgacagactgggtgaggccgaggagaggatcaaagtgctgcattcatct
ctgagcacagccaagacagacctgctggacctgcggtgtaaatacgaccaggagaaggcc
aacaaggaagaggaggtcagcgtgatcatgatgaaccttgagaaggcgaaccagaaagcg
gagatggcccagaggcaggtggaaaggctaaaggagcagctggccagtgcccggagcacc
accccaggcagctataatccaccagagggcactagtggggagagggatgagaaaggtggc
atgttgtcatccaagttggaggctaagctgatttctaaagaccgtgagatcctcaggctg
ttggagaacgtacagagactgcagttctcactacaggaagtccaggacacctcagccaat
cagatcatatcgctggaacaccagctggcctataaaacagaagctattgagagattagaa
actaaactgcaatcccagatggactatgacgagattaaaacagatctcagtatcctgaag
gtaatgaagttggcctcagcgaatggtagctcatcccaggactctgccaaggctgcagag
gctcttttgctggacaaagaggcctttcttccctctcacaaatacctgatggataaggcc
agagtcttacacaacaatgatgaggaccaatcggaggagtcaggcagaggggggggcagg
cccacagggtccttcttctcagtctcccaggtggatgtgcgtacctcggccagccctggt
cctcccaccatggaagtctcctcctctagctacgacctcccccgccccttttctgtgtcc
ccctgctcagtgggcaggctgtctgtggaccacgtcctccacaagcagctcctctgctcc
ccacttttcaagaaggaagccggcagccccatcatggccttccccaccgccctgtacgca
gccaaagccgccctaatgtcaaccaatcagggacctgcaggaactgggggcattgaggct
ggcctgcccagcgaccaatcagagagtgggagctccactgcaggcgatgatgaccagttg
gagacagcagatattgccttccagatcaaagagcagctgctgaagcacaacattggccag
cgtgtgtttggtcactacgtgctgggcctatcacagggctcggtcagtgagatcctggcc
cggcccaagccctggaggaagctgacagtgaaaggcaaggagcccttcatcaagatgaaa
cagttcctgtctgatgagcagaacattctggccctcagaaccatccaggtccgacagaga
gggagcatcactcctcgcatccgaactcctgaaactgggtcagacgacgccatcaagaat
atcttggagcaggccaagaaggagatccagtcccagagaggaggtgggtctggaacaggt
tatacatctactctttattcaactgtgctaggtgacatgaagtcgtccctgggcagcccc
tcgggcaggagcagtaacggggcagacagcagctcagacgacaccatcaagaacatcctg
gagcaggccaggagggagatgcaggcgcagcagcaggctctgatggagatggaggtctgt
ggtagggcctctgccaccagcgctgggccccaagtgaagcgcctggggctccctgagcct
tccaagggcctacccctacccaccttcatcaaacaggaggaggggggcacggtgactatg
tgcatggccaaccccatcagcagcccccaaaccccccttagtgtcctctcccctgccgcc
ttcgttcagaacatcatccgtaaagtcaagtcagagatcggcgaggcagggacttacttc
gaccagcactggtctgtggagcgggggcccataggcatggtgggcggcgtagggggcggc
agctctcagcccttcacctcagtgtctccctccctgtcctcttcctcgtcctcgggcccc
tcggcccttccccggttggagaacggagagtgtctgcccaacagtgaggaggcgtctgcg
gccgaggaggacactggctcggggatgatgcagtctgtggaggtgaaggtggagtcagac
gtgtcagtgagtggagagtcaactggccgtggcatggcctactacccatcatatatcccc
cgcaccctgaagcccaccgtgccgcccctgacaccggagcagtatgagatgtacatgtat
cgcgaggtggacaccatcgaactcacccgacaggtcaaagagaagctggccaagaatggc
atctgtcagaggatctttggtgaaaaggtgctgggtctgtctcagggcagtgtgagtgac
atgctgtctcggcccaaaccctggagcaagctgacccagaaaggcagggaaccctttatc
cgcatgcagctgtggctgctggatcagctgggacaaggactcaaccagctccccagccag
agcctctctcaagataaaagcccagtgacggcccagtcgtcgccctccccgccccccagc
ccagaggagatccactccagcccactggtggagcctgtcagcctgaccctggagagcagc
aaggagaaccagcagcccgagggcctggtgaacccccacccagagggagggaagtccacc
cccagtctgctttcccttcaccagccccacaccccgctgggcatccaggagctggtggcc
atgtacccagagttggacacatacgctatcaccaagaaagtcaaggaggtactgacagac
aacaacctaggccagcggctgtttggggagagtatactgggcctcacccagggctcagtg
tcagacctgctctccaggcccaagccctggcataaactcagcctcaaaggcagggagcct
tttgtccgcatgcaattgtggctcaacgacccgcacaatgtggacaagctgagggacatg
aagaaaatggagaagaaagcctatctgaagcggcggtatggactgctgagtaccggctca
gatagtgactctcccagcgccagctctgagtgtgtgagcccggccctggtctccatagat
ctgtgtccctacagccaggtgaagaagcccagggtggtgctgggggctgaggagaaggat
gctctgaggaaggcctatctcctggagccatacccatcccagcacaccattgagatactg
gcctctcagctcaacctcaaaaccaatacagtcatcaactggtttcacaactatagcagg
tccaggatgcgacgggaggtcctcatggagggtctccaggacaacgacacggatgcagaa
caccacagctactctccctcggcgacacagagccccacctcagacggagatgagaggggg
ctgctgcaccccactggacgcaccccccaccccatcctccccctcagcgccaacacatca
ctgcctcatgtcaaacaggaggccagtgagggggaggaggatgagagggagggcttcaac
ggacagtctaagatccagtgtttctctatgggcgtccagttccctcagttgaaaacggag
catggggacctgatagtcggctgccaagagccccacctggctccacactatattcagagc
ctgaggcaggaagaagggatgtgtagccaggctcaggggctcttccatggggagctctcc
ctagatggcccccagagagccagccagtccaggcacgagggtgacaactccagcaagtct
tttgtagacccagtcagcttcaaggcatcatcggagccctgtcgcagcagcctagaggtc
tccctcaactccccctccgctgcctcctcacccggcctcatgatgtccgtctcccctgtc
ccgtcttcctctacacccatctccccatccctgcccaacccacccaccacaagcaccaac
cacagcctggaccctaactccctgcctcccatccagagccccaagcccaacaagagtgtt
cagagacgcactgagaaaatggccaacctcaacaatatcatccataggctggaaagagca
gctaaccgggaggagaccctggagtgggagttttag
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integrated database retrieval system
