Oncorhynchus gorbuscha (pink salmon): 124034429
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Entry
124034429 CDS
T07892
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03082
ATP-dependent chromatin remodeling
ogo03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
124034429
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
124034429
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ogo01009
]
124034429
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ogo03021
]
124034429
03036 Chromosome and associated proteins [BR:
ogo03036
]
124034429
Protein phosphatases and associated proteins [BR:
ogo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
124034429
Transcription machinery [BR:
ogo03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
124034429
SWI/SNF complex
124034429
Chromosome and associated proteins [BR:
ogo03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
124034429
PBAF complex
124034429
SWI/SNF complex
124034429
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
DUF1679
Motif
Other DBs
NCBI-GeneID:
124034429
NCBI-ProteinID:
XP_046203593
LinkDB
All DBs
Position
LG04:complement(61716920..61722244)
Genome browser
AA seq
385 aa
AA seq
DB search
MRMLIRADLCCYISNMALSKTFGQKPVKFQLEEDGDYYMIGSEVGNYLRMFRGSLYKRYP
SLWRKLASVEERKKIVESSHDHGYTTLATSVTLLKASEVEEIFEGNDEKYKAISISTEPP
AYLREQKGKRNSQWVPTLPNSSHHLDAVPCSTTINRSRLGRDKKRTFPLCFDDHDPAVIH
ENATQSEVLVPIRLDMEIEGQKLRDAFTWNMNEKLMTPEMFAEILCDDLDLNPLAFVPAI
ASAIRQQIESYPTDSILDEQTDQRVIVKLNIHVGNISLVDQFEWDMSERENSPEKFALKL
CSELGLGGEFVTTIAYSIRGQLSWHQRTYAFSENPLPTVEIAIRNTGEADQWCPLLETLT
DAEMEKKIRDQDRNTRRMRRLANTW
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatgctcatccgcgctgatctttgttgttacatttccaatatggcgcttagtaag
acatttggacaaaaacctgtcaaatttcagcttgaagaagatggggattattatatgatt
gggtcagaggtaggaaattacctgcgtatgttcagaggttccttgtataagagataccca
tcactatggaggaaactggcatcagtggaggagcggaagaaaatagtggaatcatcacac
gatcatggttacacaaccttagctaccagtgtgacccttctgaaggcatcagaggtagag
gagatcttcgaaggaaacgatgagaagtacaaagctatctccatcagcacagagccccca
gcttacctcagggagcagaagggtaagcggaatagtcagtgggtccccacgctacccaac
agctctcatcatctggatgctgtcccctgctccaccactatcaaccgcagccgcttaggg
cgagacaagaagaggaccttcccgctctgttttgatgaccatgatcctgcagtgatccat
gagaatgccacccagtctgaggttctggttccaatccgactggacatggagatagagggg
cagaagcttagggatgctttcacctggaatatgaacgagaagctcatgactcctgaaatg
tttgcggagatcctgtgtgacgacctggacctgaaccccttggcctttgtcccggccatc
gcctcagccatccgccagcagatagagtcctatcccacagacagcatcctggatgaacag
actgaccagagggtcatcgtcaagctaaacatccacgttggaaacatctcgctcgtggac
cagtttgagtgggatatgtcagaaagggagaactccccagagaagtttgccctgaaactg
tgctcggagctgggcctagggggagagtttgtcaccaccattgcttacagcatccgagga
caacttagttggcaccagaggacatacgctttcagtgagaacccgctgcccacggtagag
atagccatccggaacacaggtgaagctgaccagtggtgcccactgctggagacactgaca
gatgcagagatggagaagaagatcagggaccaggatagaaacactcggcgcatgagacga
ctggcaaacacatggtag
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