Oncorhynchus gorbuscha (pink salmon): 124034522
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Entry
124034522 CDS
T07892
Name
(RefSeq) nuclear receptor ROR-beta-like isoform X1
KO
K08533
RAR-related orphan receptor beta
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogo03000
]
124034522
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ogo03310
]
124034522
Transcription factors [BR:
ogo03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
124034522
Nuclear receptors [BR:
ogo03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
124034522
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
DUF2716
Motif
Other DBs
NCBI-GeneID:
124034522
NCBI-ProteinID:
XP_046203789
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All DBs
Position
LG04:66024852..66064566
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AA seq
475 aa
AA seq
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MKTDVVAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNAAYSCPRQRNCLIDR
TNRNRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQRILNERQQQTCEAE
ALARVYSSSLTNGLSTLNHEIGGTYANGHVIELPKGQVNGGATGGYYHGMDSTQPSPDQS
GLDLAGIKHIKQEPVYDLTPVANLFNYSTYQDSQLAHSNVSMGELDRIAQNIIKSHLETC
QYTADELQQLAWQTHSYDDIKMYQSKTRDVLWQQCAIQITHSIQYVVEFAKRISGFMELC
QNDQILLLKSGCLEVVLVRMCRAFNPLNNTVLFEGKYGGMQMFKALGCDDLVSAVFDFAK
SLCSLQLTEEEIALFSAAVLISTDRPWLMEPRKVQKLQEKIYFALQHIMQKNHMDEDALA
KLIGRIPMLSAVCTLHTEELQAFQQLHPETVNVLFPPLYKELFNPDPNAAITMPK
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgaaaactgatgtcgtagcccaaatcgaagttataccgtgcaaaatctgtggagacaaa
tcatcaggaatccactatggagtcatcacgtgtgagggctgcaaagggttcttcagacga
agtcagcagaacaacgctgcatactcatgccctcgccagaggaactgtctgatcgacagg
accaaccgaaaccgctgccagcactgccgtttacagaagtgtcttgcactcggaatgtcc
agagatgcggtgaagtttggccgcatgtccaagaagcagcgtgacagcctgtacgccgag
gtacagaagcaccagcagcggatcctgaatgagcggcagcagcagacgtgtgaggcagag
gccctggcgcgcgtctactcctccagcctgaccaacggcctcagcaccctcaaccacgag
atcggaggcacctacgccaacggccacgtcatcgagctccccaagggccaggtgaacggt
ggtgccacgggtggctactaccatggtatggactccacccagccctccccggaccagtca
ggcctggacttggctggcattaagcacatcaagcaggagccggtgtacgacctgacccct
gtggctaacctgttcaactatagcacctaccaggacagtcagctggcgcacagcaatgtc
agcatgggagagctagatcgtatcgcccagaacattataaagtctcacctggagacctgt
caatacacagcagatgagctgcagcagctggcctggcaaacacactcctacgatgacatc
aagatgtaccagagcaaaacacgagatgtgctgtggcagcagtgtgccatccagatcacc
cattccatccagtatgtggtggagtttgccaagcgcatctcaggcttcatggagctttgc
cagaacgaccagatcctcctgctcaagtcaggttgtctggaggtggtcctggttagaatg
tgtcgggcgtttaacccactcaacaacacagtgctgtttgaggggaagtacgggggcatg
cagatgttcaaagcactaggctgtgacgacctggtcagcgctgtgtttgactttgccaag
agtctgtgctctctgcagctcactgaggaggagatcgctctgttctctgcagcagtgctc
atctccacagaccgtccatggctgatggaacccaggaaggtgcaaaagctccaggagaag
atctactttgcgctgcagcacatcatgcagaagaaccacatggacgaggacgcgctggct
aagctgattggtcggatacccatgctgtcggccgtgtgtactctccacaccgaggagctg
caggccttccagcagcttcaccctgagacggtgaacgtgctcttccccccgctctacaag
gagctgttcaatcccgaccccaatgcagcgatcaccatgcccaagtga
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integrated database retrieval system
