Oncorhynchus gorbuscha (pink salmon): 124034599
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Entry
124034599 CDS
T07892
Symbol
ttc37
Name
(RefSeq) LOW QUALITY PROTEIN: tetratricopeptide repeat protein 37
KO
K12600
superkiller protein 3
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124034599 (ttc37)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogo03019
]
124034599 (ttc37)
Messenger RNA biogenesis [BR:
ogo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
124034599 (ttc37)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_16
TPR_19
TPR_17
TPR_11
TPR_8
TPR_14
TPR_9
TPR_CcmH_CycH
TPR_12
PPTA
ANAPC8
ANAPC3
TPR_15
ARM_TT21_C
TPR_EMC2
HAT_PRP39_N
Fis1_TPR_C
Motif
Other DBs
NCBI-GeneID:
124034599
NCBI-ProteinID:
XP_046203956
LinkDB
All DBs
Position
LG04:70835334..70875759
Genome browser
AA seq
1566 aa
AA seq
DB search
MSNKEVKSALKNARDAIKNKEFKEALKHCKAALKLEKNNYNAWVFIGVAASELEQPDQAQ
TAYRKALELEPEQLLAWQGLANLYEKSDQTDFKAELPKVYQKLIELYESSDKTKCYEAIR
KLADIFHMEKDYLQVARVWRRLIQLKEGEGANKAELLQLWQQMTCLLSDSMEDHDNETQQ
HLIAAFEKAMVLSDNVPGEDHRKLSADYLKCLSQLSHEECKIKEACESILALYPSQTFPL
EILGAHHLKSGVCSEDAGRCFSRLLELDPDSGLGHLGLGIRALEEGKCDDSIKYLAQGLK
RMRSSLVGWCSLAQAQLKMHRYSDCATSCSQGLKLGGTGEEALGQKLLRLRLEALVRTGD
EHTADQALESLSQLSDANNDPVLVALKGRAYLQKGQVDQVLQVSTGLLNSHPDLAEGLAL
RGLAHIAQGHHQLAEQSLLQAAAQSPACGEYYFLLGRLYWDMGEESRRDRSKAHTHLLKA
AKLDPYLGSVFCYLGHYYREVSRDQGRARGCYKRAFELDSNDAESGAASVDLSMNEGDMD
TALAVLQSVIQRATPGSAKWAWMRRGLYHLKVGQHPQACADLQAALRADPQDWVCWECLG
EAYLNRRSFTSALKAFAKAQLLNPSSIYSLYQTAAIKQTLGKFKEAAAEYLQIIAQEDYV
PALKGLGECLLSLARCLMEDYRDGGAIDLIQQAIQYLFRAVELRPDLSCLWKLLGDACTS
VSTXAPNRARVVVPGPLAGLQPPDQGHLLNQGHTLRVGERCYGRALKLMPESSSLWYDLG
LNYYHQACLPPCLQEMEHNTLLLEKALQCVKKAIMLNSSNHSYWNALGVVAMSKGLENYA
LAQHSFIKSVQVEPNNVVAWTNLGALYLKKDSVELSHEAFKIAQSLEPLYVNCWIGQALI
AEMVGSYDTMDLFRHTTELRTHTEGVKGYAYWVCATLLDKSNRDSELYRYNIVQMNAVSA
AQVALSKYTERIQTDPDAFVMLGFLNEHLQLKKQAVLAYQRAVELLQATPSVELLAFSLG
SYGRALCNTGQWEEAVHVYSSTPLEVLHDLAGLALAYCRAGLIPESISSYEKALMVTSTE
KEKAYILTSLALLQHRLGNMDSAKTLLFKCSMLKEPVPESLLCLCALGLVHGDSTLASAA
LTELLKQGRATGAAVEQRCLLTCTLLALQGNYSAVQREASRAVHSNPGNPSLWALLSRLV
PQYYPRKAKGGAVAGHVACLSSMTQGKRALLYSGVNQLACGRHSGEDRSRNALKTMQRAV
LLCPDDPAVWAGLMAACHTENTACSLSGSTPGRRGLEQVLMAVVSEKVRNVEEVEQPLAQ
ALEGWVLQQAVTGLTSGGQLEQAEALCSQVLSVSPEHPAVVLLLRQVQCEHLLLSSAGTA
LPASVLEQLSSAVSANPTSVAAWHWLAEVYRTQGLLVQAVMAYRQSLQLASQLDLYSGKM
ACLLRLALLALSPCMSKVPGDEWKELVLEATTEALKLGPSPVALLVQALLHFATKMSARE
TRRLLERLVYFSSQGYPETVACVARWYLLRHLHAKDDLELMDTLVDDAKANGDSRLLEFH
TRLNSC
NT seq
4701 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaacaaagaagttaaatcagctctaaaaaatgccagagatgccataaagaacaag
gaatttaaagaggctctaaaacactgcaaggctgccctgaaactagagaagaacaattac
aatgcctgggtgttcattggtgtggccgcgagcgagctggagcaaccagaccaggcccag
acagcctacaggaaggctctggagctggagccagagcagctgctggcctggcagggatta
gcaaacctgtatgagaaaagtgaccagacggatttcaaagcggaactacccaaagtctac
cagaaactcattgagctttatgaaagttcagacaaaacaaaatgttatgaggcgatcaga
aaactggcagacatcttccatatggagaaggactatttacaggtggccagggtgtggcga
aggctgattcagctgaaggaaggagaaggtgctaacaaggcagagctgctgcagctatgg
caacagatgacctgccttctctcagacagcatggaggatcacgacaatgagactcagcag
cacttaattgcagcctttgagaaggccatggttctctctgacaatgtgcctggcgaggac
catcggaagctctcagctgactacctcaaatgcctttcacaactttcgcatgaggagtgt
aaaattaaagaggcctgtgagtccatattggccctctatccctcacaaacattccctttg
gagatcctcggtgcacatcatctcaagtcaggggtctgcagtgaggacgcaggccgttgt
ttctctcgtctcttggagttggacccagacagtggcttaggccatctgggtttgggcatc
agagctctggaggagggaaaatgtgacgactccattaagtatctggcccaaggactgaag
cgaatgcgctccagcttggtgggctggtgcagccttgctcaggcccagctgaaaatgcac
cgatattccgactgcgcaacatcctgctcccaaggtctgaagctgggtgggactggagaa
gaggcactgggacaaaagctcctgaggctgaggctagaggcccttgtgaggactggagat
gagcacactgcagaccaagccctggagagcctctcacagctttcagatgctaacaatgac
cctgtcctggtagccttaaaaggaagagcctatttgcaaaaaggccaagttgaccaagtg
ctccaggtgtccacggggctgctgaactctcaccctgacctggctgagggattggcgctg
aggggactggcacacattgcacagggacatcaccaactagcagaacagagcctcctgcag
gctgcagcccagagcccagcctgtggagagtactacttcctgttggggaggctgtactgg
gacatgggggaggagagtcgcagggacaggagcaaggcccacacccatctactgaaggct
gccaaactggatccgtacctgggctctgtgttctgctacctgggccattactaccgggag
gtgtccagggaccagggtcgagccaggggctgctacaagagagcctttgagctggacagc
aacgacgcagagtccggggctgcctctgtggatctgagcatgaatgagggggacatggac
actgccctggctgtgctccagtcagtgatccagagagccacccctggttcagcaaagtgg
gcctggatgagacgaggcctttaccacctgaaggtgggccagcacccccaggcctgtgca
gatctgcaggctgctctgagggctgacccccaggactgggtgtgctgggaatgtctgggc
gaggcctacctgaaccgccggagcttcacgtcggccctgaaggcctttgccaaggcccag
ctgctcaacccctcctccatatacagcctctaccagactgctgctatcaaacagaccctg
ggcaagttcaaagaggctgctgcagaatacctgcagatcatagcccaggaggactatgtg
cctgcactcaaaggtcttggggagtgtctgctgtccttggccagatgcctgatggaggac
tatagagatggaggagccatagacctcatccagcaggccatccagtacctcttcagggct
gtagagctgcgtccagacctgtcctgtctgtggaagttactgggagacgcctgcacctca
gtcagcactngtgcccccaacagggcccgcgttgtggtgccaggacccctggccgggtta
caacccccagaccagggccaccttctcaaccaaggacacaccctccgagtgggggagaga
tgctatgggcgtgctctgaagctgatgcctgagagctccagcctgtggtatgacctgggt
ctcaactactaccaccaggcctgtctgcccccctgccttcaggagatggagcacaacacc
ctgctgctggagaaggccctgcagtgtgtgaagaaggccatcatgttgaacagtagtaac
catagctactggaacgccctgggagtggtcgccatgagcaaaggacttgagaactatgcc
cttgcccaacacagcttcattaagtcagtgcaagtggaacccaataatgttgttgcttgg
acaaacctgggtgctttgtatctgaagaaagacagtgttgagctctcccatgaagccttt
aagatcgcccagtctttggaaccactgtatgtcaactgctggattggacaggcccttatt
gcagagatggtgggcagttatgataccatggacttgttcagacacaccacagagctcagg
acacacacggagggggtaaagggctatgcttactgggtttgtgccactctgctggataag
agtaacagggactctgagctctatcgctacaacattgtccagatgaacgcggtgtctgcc
gctcaggtggctttgagcaagtacacagagcggatccagacagaccctgatgccttcgtc
atgctgggtttcctcaacgagcacctgcagctaaagaagcaggcagtgctggcttaccag
agagctgtggagttgctgcaggcgacgccttccgtggagttactggccttctccctggga
agctatggccgggccctctgcaacacaggccaatgggaggaggcggtgcacgtttactct
tccacacctctagaggtgctccacgacttggctggcctggcgctggcctactgcagagca
ggactcatcccagagagcatcagttcctatgagaaggctctgatggtgacctctactgag
aaagagaaggcctatattctgacttctctggctctgctacagcacagactggggaacatg
gactctgctaaaacgctgctcttcaaatgctccatgctgaaggaacctgtgccagagtct
ctgctgtgcctgtgtgctctggggcttgtccatggggacagcaccctggccagcgcggcc
ctcactgagctgctgaagcagggcagggccactggggctgccgtggagcaacgctgcctg
ctcacctgcaccctgctggccctgcagggcaactacagcgctgtgcagcgagaggcctcc
agggctgtccacagtaaccctggcaacccttccctgtgggccctgctttccagactggtg
ccacagtattaccccaggaaggccaagggaggtgcagtggcaggccacgttgcgtgtctc
tccagcatgacccaaggaaagagggcactgctgtacagtggagtgaaccagctggcatgt
ggcaggcactctggagaagatcgcagcaggaacgccctaaagaccatgcagagggctgtg
ctgctctgccccgatgacccggcggtgtgggcggggctaatggctgcttgtcacacagag
aacacagcctgctccctttctggctccacccctggcagacgaggcttggagcaggtgctc
atggccgtggtgtcagagaaagtacggaatgtggaggaggtggaacagcctctggcccag
gctctggagggttgggtgctgcagcaggctgtgacaggactgacaagtggaggccagcta
gagcaggctgaggccctctgctctcaggtcctgagtgtgtctcctgagcaccctgctgta
gtcctgctgttgaggcaggtgcagtgtgaacacctcctcctgtctagtgccggtactgcc
ctgccagcttctgtcctggagcagctcagcagtgccgtctcagccaatcccacctcagtg
gccgcctggcactggctggcggaggtgtatcgtacccagggtctgctggtacaggcagta
atggcctacagacaaagcctgcagctggcctcccagcttgacctctacagtgggaaaatg
gcatgtcttctgcgcctagccctgctggccctcagcccctgcatgtcgaaagtccctggt
gatgaatggaaggagctggttctggaggcgaccaccgaggctctgaagctgggcccctcc
cctgtagctctccttgtccaggccctgctacacttcgccaccaagatgtccgccagggag
acgaggcgtttgttggagaggctggtgtacttctcctcccaaggttacccagagactgtg
gcgtgtgtggctcgctggtacctcctacgccacctgcatgccaaagacgacctggagctg
atggacaccctggtggacgatgccaaagccaatggagacagcagactgctggagttccac
acacggctcaactcttgctga
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integrated database retrieval system
