KEGG   Oncorhynchus gorbuscha (pink salmon): 124034629
Entry
124034629         CDS       T07892                                 
Name
(RefSeq) LOW QUALITY PROTEIN: ataxin-2-like
  KO
K23625  ataxin 2/2L
Organism
ogo  Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:ogo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ogo03019]
    124034629
Messenger RNA biogenesis [BR:ogo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     124034629
SSDB
Motif
Pfam: SM-ATX LsmAD PAM2 LSM
Other DBs
NCBI-GeneID: 124034629
NCBI-ProteinID: XP_046204009
LinkDB
Position
LG04:73828161..73853062
AA seq 1057 aa
MSMKQAGGNRKPGSGAASGAGGSGGRQNLGRGRHSAKGSSAAVVSNGVYANMRMVHVLTS
LVGNNCELKVKNGMVYDGVFKTYSPECDLVLDAANIKSPGPSVGLRQEDLVDSIIFKASD
VVVVHFRDVDFNYARKDNFTDTAVGGRINGEHKEKDLEPWDGGRQHHMVSGSLESLDTDV
SNGWDPNDMFKYNEEQYGIKSTYDSSLSTYTVALERDNSEEFLKREARAAQLAEEIEASS
TYKSRVALENDERSEEEKYTAVVRGEREQHTLNREKYIPPGQRNREGMSWGAGRQNSPRL
VQSSSGPPRPGLHDYTPSSGADQRVVNGGATSCPSPSSRYQSGPSPLPPRAATPTRPPSR
PPSRPSRPPSHPSAHGSPAPISTIPSRRMSSEGPPRMSPKTQRTPRTHRVPPGSRVPPGV
DFMPHNAPGEVPVPPATRSSSSGGTWSSVVSGAHRPRSPRQNSMGGASPGPSPQTGSTPX
EPVNTPMSASSPTASPAPNMAATSSAEAKDSRVQATRQNSPTVNKENMKPLESPPSINRP
LSKGLQRGHSSHDPPSMAPDHRKQIDNLKKFSVDFRLQSSSNPDPQFQQMVTKPPQDTGE
KSKQLPLDKGLEGSEGPVVPARSNKPDSPGAPSPSVSSTLCPAPEQNRGPDVTSQGVQTS
APNLSGGAKPEDKEEDEADQMRKSTLNPNAHEFKPRVFTPQPKPATTPTPPRPQGQPSPS
IVMQQPQQVYFPQMYPLTPVSPGVQSPAMYHVQMPHMTLSQSKPYRPVPNMPQQRSDQHH
PQGTPTMMHPAAGPPIVAQSPAYSAQYFTCSPQQFTSQQLMPHYQSQAQHVFSPVIQGQA
RMMAPPTHGHPGQLVSSTTQYGEQTHTMYVSQGPMPQQYAHPNTTLHPHPQPSATPTGQS
QQGVQHGGNHPAPSPVQQHQAAAAAQALHMGNQPQQQMYQALAPTPPSMTPGPNPQSPQG
SFSSAQQAVYLHPQQMQHGYNPSHMAHMQQAHIQSGMVPSHHGNPGHPQMMLMATQQQGG
PQPQLAQNALNPIPVSSTAHFSYLAHPQVQQHHQQQL
NT seq 3174 nt   +upstreamnt  +downstreamnt
atgtcaatgaagcaggccggtggtaatcgcaaacccggcagtggcgctgcctctggtgcc
gggggaagtggcggacgacagaatttgggcaggggacggcatagtgccaaaggatcttca
gcagcagttgtctctaatggtgtatatgcaaacatgaggatggtccatgtcttgacatca
ttagtgggaaacaattgtgaactgaaagtaaaaaatggaatggtttatgatggagtgttt
aaaacatatagcccagagtgtgacctggttctggatgcggccaacatcaagagtcctggg
cccagtgtgggcctgcgacaggaagacctcgtggacagcattatcttcaaggcttccgat
gtggtggtggtgcacttcagagacgtggacttcaattatgccagaaaagataacttcacg
gacactgcagtgggcggcagaatcaacggggaacacaaggagaaggacctggagccgtgg
gatggagggcggcagcatcacatggtctcaggcagcctggagtctctggacacagacgtg
tcaaatggctgggacccgaatgacatgttcaagtacaatgaagagcagtatggcatcaag
tccacctacgacagcagcctgtccacctacacggttgccctggagcgggataactctgag
gagtttctgaagcgggaggcgcgagcggcccaactggcggaggagatcgaggccagctcc
acctacaagtcccgcgtggccctggagaatgacgagcgcagcgaggaggagaagtacact
gcggtggtgaggggagagagggagcaacacacactcaacagagaaaagtacattcccccg
ggtcagaggaatagagaggggatgtcatggggagcgggtcgtcagaactcccctaggttg
gtccagagcagcagtggacctccccggccaggtcttcacgactacacccccagctctgga
gctgaccagcgggttgtcaacggaggtgccacctcctgcccatcgccctcctcccgctac
cagtcaggcccctcccctctcccacccagggcggccacgcccacccggcctccatccaga
cccccctcgcggccctcccggcccccgtctcacccctctgctcacggctctccagctccc
atctccactatacccagtagacgcatgtcctccgaaggccctcccaggatgtccccaaag
acccagcgtacccctcgcacccacagagttccccccgggagtagagtccccccgggagtg
gacttcatgccccacaatgctccaggagaggtgcctgtgcccccggctacccgcagcagc
tcatccggtggcacctggtcttcagtggtcagcggagcacacagacctcgatcccctcgg
cagaacagcatgggcggagcctctcctggtccctcgccccagactgggtccactccgntg
gaacctgttaacacgccaatgtcagcttcctcacctactgctagccctgcccccaatatg
gccgccacctcctcagcagaggcgaaagattctcgggtccaggcgacgagacagaactct
cctacggtcaacaaagagaacatgaaacccctggagagcccccctagtatcaacagacca
ctctctaaaggtctgcagcgtggacacagctcacatgaccccccctccatggcaccagac
cacagaaaacaaatagacaatttaaagaaatttagtgtagattttaggttgcagtccagc
tctaacccagacccacagtttcagcagatggtgactaagcctccgcaggacacgggagag
aagtccaagcagcttcctctggataaggggttggaggggtctgagggccctgtggtccct
gccaggagcaacaagccagacagccctggcgcaccatccccctccgtgtcctctaccctc
tgtcctgccccggagcagaacagggggcctgacgtgacctcgcagggcgtccagacatct
gcacccaacttaagcggaggagccaagcctgaagacaaggaagaggatgaggcagatcaa
atgaggaagtcgactctgaatccgaatgcccacgagttcaaacccagggtcttcactcct
cagccaaagccggccaccaccccgaccccccctcggccccaaggccagcccagcccctct
atcgtcatgcagcagcctcaacaggtctactttccccagatgtaccctctgacccctgtc
agccctggagtccagtctccagccatgtaccacgtccagatgcctcatatgacgctgagc
cagtccaagccctacagaccagtacccaacatgccccagcagaggtcagaccagcaccac
ccccagggcacgcccaccatgatgcacccggctgcggggccgcccatcgtggcccagagc
cctgcctactcagcccagtacttcacgtgtagcccacagcaatttaccagccagcaactg
atgccccactaccagtcacaggcccagcatgtgttcagcccggtgattcagggtcaggcc
aggatgatggcccctcccacccacggccatcctggccagctggtctcttccaccacccag
tatggtgaacagactcacaccatgtacgtgtcacaaggccccatgccgcagcagtacgcc
caccccaataccacactgcatccccacccccagccctcggccacccccacaggccagtcc
cagcagggtgtgcagcacggtggcaaccacccggcccccagccccgtccagcagcaccag
gctgctgcagctgcccaggccctgcacatgggcaaccagccccagcagcagatgtaccag
gccctggcccccaccccaccctccatgaccccggggcccaacccccagtccccccagggc
agcttctcctcggcccagcaggcagtctacctccacccccagcagatgcagcacggctac
aacccctcccacatggcccacatgcagcaggcccatatccagtctgggatggtgccgtcc
caccatggtaaccctggccaccctcagatgatgctgatggccacccagcagcaaggtggc
cctcaaccccaactcgcccagaatgccctcaaccccatcccagtgtcctccactgctcac
ttctcttacttggctcacccccaagtacaacagcaccatcagcagcagctgtag

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