Oncorhynchus gorbuscha (pink salmon): 124034641
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Entry
124034641 CDS
T07892
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM36-like isoform X1
KO
K12013
tripartite motif-containing protein 36 [EC:
2.3.2.27
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124034641
04121 Ubiquitin system [BR:
ogo04121
]
124034641
Enzymes [BR:
ogo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124034641
Membrane trafficking [BR:
ogo04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
124034641
Ubiquitin system [BR:
ogo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
124034641
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COS
zf-B_box
zf-RING_UBOX
SPRY
ANCHR-like_BBOX
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_2
zf-C3HC4_3
RING_XB3-XBAT31
zf-RING_5
zf-RING_2
U-box
Motif
Other DBs
NCBI-GeneID:
124034641
NCBI-ProteinID:
XP_046204039
LinkDB
All DBs
Position
LG04:74462404..74488516
Genome browser
AA seq
759 aa
AA seq
DB search
MSDTADTEDNQDMLPSLVQQIVQRITAGEVPIKNIERELICPICKELFTHPLILPCQHSV
CHKCVRELLLLNHEDSFDAGSECSLPGSPGPRSRVPSPSMERLDRLARSATLQRRSFGRR
GSISSPGWRRGSVTPRVTTFPCPGCQHDVDLGERGMSMLFRNFTLESIVERYRQAARAAV
AIMCNMCKPPQQEATKSCMDCKASYCNECFKFHHPWGTPKAQHEYVGPTMNFRPKVLMCP
EHEMEKVNMYCEVCRRPVCHLCKLGGSHANHKVTSMSSAYKILKEKLSKSIHYLISKEDQ
VRTQISHLEVLINETEENGQVAQCGAYEHFERLFQTLQERKSEMLNSIEQSRTRRLEQLR
GQVEEYQGMLENSGLVGYAQEVLKETDQSCFVQTAKQLHTRIAKSTESLRTFHPAADPSF
DEFVLETSREETMLKELCFGGVPEPPIIDLSRSHVYNEGLLCWQLAEDTLATDHQVLEYR
RLGAEQDGDSRWRLTDRVYGPSTVVCDLEADSLYSFRVRSCRNSLYSPYSPEVTFHTPPA
PAFGFLFNDNCGFSSERLALSRRRDSVESMAGMAFLLAAERVQTGSYMGLDYIIGDTGIS
QGRHYWAFRVEPHSYLVKVGVASDSKLLEWFHNPRDTSSPRYDHDSGHDSGSEDTCYDLS
QPFTLLTVGMGKMFLPKASISAGSDHGDHSNRVLPMPQRIGVCLDYDVGRVYFYDADTMR
CLYERQVDCSGTMYPAFGLMGSGKVHLEEFIAEKRLSYM
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgtcggataccgcggataccgaagataatcaggatatgttaccgagtttggtccagcag
atagtccagcggataacagcgggagaggtccctatcaagaatattgagcgggagctcatt
tgtccgatttgtaaggagctgtttacgcaccccctcatcttgccctgtcagcacagtgtt
tgtcacaagtgtgtgcgagagctgctgctgttgaaccatgaggattccttcgatgctggg
tctgaatgttccctccctgggagcccaggaccccgatccagagtgccctcgccaagcatg
gagaggctggataggcttgcaagatcagccacactgcagagaaggtcgtttgggaggaga
ggctccatctcctcaccaggatggagacgtggctctgtgaccccccgcgttaccactttc
ccgtgcccaggctgccaacatgatgtggacctgggtgagcggggcatgagcatgctcttc
cggaacttcaccctggagagcatcgtggagcgctaccggcaggcagcccgcgccgccgtg
gctatcatgtgcaacatgtgcaagccgccccagcaagaggccaccaagagctgcatggac
tgcaaggccagctactgcaacgagtgcttcaagttccaccatccatggggcacccccaaa
gcccagcacgagtatgtggggcccaccatgaactttaggcccaaggtgctgatgtgtccg
gagcatgagatggagaaggtcaacatgtactgtgaggtgtgccgccgtccagtctgtcac
ctgtgcaagctgggaggctcccacgccaaccacaaagtcacatccatgagtagtgcctac
aagatcctcaaggagaagctatcaaagagtattcattacttaatcagcaaagaggaccaa
gtgaggactcagatttcccacctggaggtgttgatcaatgaaactgaggagaatggccag
gtggcgcagtgtggggcctatgagcattttgagcggctgttccagaccctccaggagagg
aagtctgagatgctgaactccatcgagcagtcgaggacacggcgtctggagcagctcagg
ggccaggtggaggagtaccagggcatgctggagaatagtggcctcgtgggctacgcccag
gaggtcctcaaggagacagaccaatcctgcttcgttcagacggccaagcagctgcacacc
agaattgcgaaatccaccgagtctctgagaacgttccaccccgcggctgacccctccttt
gatgagtttgtgctggaaacttccagagaggagactatgctgaaggagctatgttttggg
ggagtccccgagcctcccatcattgatctgtcccgtagtcacgtctacaacgagggcttg
ttgtgctggcagctggctgaggataccctggccacagaccaccaggtgctggagtacagg
aggctaggcgcagagcaggacggcgacagccgctggcgcctcacagacagggtgtacggc
cctagcacagtggtgtgtgatctggaggccgacagcctctactcgttccgagtccgcagc
tgccgcaactccctctacagcccctacagcccagaggtcaccttccacacaccacctgcc
ccagcatttggcttcctattcaacgacaattgcggcttcagctcggagcggctggcgttg
agcaggcgccgtgactctgtggagagcatggccggcatggccttcctgctggctgctgag
cgtgtgcagacaggcagctacatgggcctggactacatcatcggtgacacgggcatctct
cagggcagacactactgggccttccgcgtggagccccactcctacctggtcaaggtgggc
gtggcctctgattccaaactgctggagtggttccacaacccccgagacactagtagcccc
aggtacgaccacgacagtgggcacgacagtggcagcgaggacacgtgctatgatctgtcc
cagcccttcactctgctcactgtgggcatgggtaaaatgttcctccccaaagcttccatc
tctgccggcagcgaccacggcgaccacagcaaccgggtgctgcctatgccacagcgtatc
ggcgtgtgcctagactacgatgtgggccgggtctacttctacgatgcagacaccatgagg
tgcctttacgagcggcaggtggactgctccggtaccatgtaccctgcctttggcctcatg
ggtagtggcaaggttcatctagaggagttcatcgcagaaaagcggctgtcgtatatgtga
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