KEGG   Oncorhynchus gorbuscha (pink salmon): 124034652
Entry
124034652         CDS       T07892                                 
Name
(RefSeq) RNA-binding protein MEX3B
  KO
K15686  RNA-binding protein MEX3 [EC:2.3.2.27]
Organism
ogo  Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:ogo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ogo03019]
    124034652
   04121 Ubiquitin system [BR:ogo04121]
    124034652
Enzymes [BR:ogo01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     124034652
Messenger RNA biogenesis [BR:ogo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     124034652
Ubiquitin system [BR:ogo04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    124034652
SSDB
Motif
Pfam: KH_1 KH_Vigilin zf-C3HC4_3 KH-I_KHDC4-BBP KH_2 KH_DEAH11_2nd zf-C3HC4 Prok-RING_4 zf-RING_5 zf-P11
Other DBs
NCBI-GeneID: 124034652
NCBI-ProteinID: XP_046204060
LinkDB
Position
LG04:complement(75567749..75572672)
AA seq 595 aa
MPSSTSLLETEETEPEIPPLVVHIFGDIGLDDHYRHTEQPESLLHPRPVSHFNVLGAVLD
LQPIQHHHPTPTEEDEERANEDVLGEDDFNKTLLVQAQVSGLGSVMLPGMDTPETHLLYN
EFDHGTLQQATGMMVLPPGYEVETSLLMRRKSVNTTECVSVPSSEHVAEIVGRQGCKIKA
LRAKTNTYIKTPVRGEQPMFVVTGRKEDVVMAKREILSAAEHFSLIRASRNKAGSVAAAG
PGLPAAPSLPGQTTIQVRVPYRVVGLVVGPKGATIKRIQQQTHTYIVTPSRDKEPVFEVT
GMPENVDRAREEIEAHIAIRTGNCVEIPGDGNDFHYNGTDVSFEVGSCGAWLQSNAAAPA
SAQRTGNCGVRMTANYRNDSSSSLGSGSTDSYYGGGGNRMADFSPTSPFVNNNNNVGASF
WFEETLLPLASEELAALGSPGFDPLAITTAAPAPQPQVVWSHLEQGVQLLGGRQAPVRDS
QSGTPHLSPSFQEALEHPMAQRVQRVSLSVSESQKFPVYGPTFSSSSDSSSSPPDSCRGG
QECIRCLESEIIAALVPCGHNLFCIECANRICQSPEAVCPVCQAPVTQAIRLSLP
NT seq 1788 nt   +upstreamnt  +downstreamnt
atgccaagtagcacatctttgttggagaccgaggaaactgagccggagatcccgccacta
gttgtgcatatattcggcgacataggcctggatgaccactacagacacacggaacaaccc
gagagccttttgcatccacgcccggtctctcatttcaatgtgcttggtgccgtgctggac
ctgcagcctatacagcaccaccatccgacaccgacggaagaggacgaagaacgagccaac
gaagacgtgttgggagaggatgatttcaacaagacgctgcttgtgcaggcccaagtctcg
ggactaggctctgttatgctacctggaatggatacgcccgagacacacttgctgtacaat
gagtttgaccacggcacactacaacaggctacggggatgatggttttaccgcctggctat
gaagtcgagacctcgctgctcatgcggaggaagagtgtgaacacgacagagtgtgtctcg
gtgcccagttcagaacatgttgccgagattgtcggtagacaaggttgcaagatcaaggca
ttgcgagcaaagaccaacacctacatcaagaccccagtgcgaggggagcagccaatgttc
gtggtgacagggcggaaggaggatgtggtcatggccaagagggagatcctctcggcggct
gagcacttctccctcatccgagcctcccggaacaaggcaggttcggtggctgcagcaggg
ccagggctacctgctgcaccttccctacctggtcaaaccaccatccaggtgcgtgttccc
taccgcgtggtgggactggtggttgggcccaagggggcgaccatcaagcgcatccaacag
cagacacacacttacattgtcactcctagccgagacaaagagccagtgtttgaggtgacg
ggcatgcctgagaatgtggaccgagcgcgagaggagattgaggcccacattgccatacgc
acaggcaactgtgtggagattccaggagacgggaacgacttccactacaacggcactgac
gtcagcttcgaggtgggaagctgtggggcgtggctgcagtcaaacgcagccgcacctgcc
agtgcccagcgcaccggcaactgcggtgtgcgcatgactgccaactaccgcaacgacagc
tccagctctctgggcagtggctccactgactcctactacggcggaggggggaaccgcatg
gccgacttcagccccaccagccccttcgtcaacaataacaacaatgttggggccagcttc
tggtttgaggagactctgctccccttggcgtctgaggagctggcagcactgggatctcct
gggtttgaccctctggccatcaccacagctgctcctgcaccgcagccacaggtggtgtgg
agccacttggaacagggtgtccagctgttgggtggacgccaggcccctgtccgagatagc
caatccggcacacctcacctctccccttccttccaagaggccttggaacaccccatggcc
cagcgggttcaaagggtctccctcagtgtctcagagtctcaaaagttcccagtctacggc
cccaccttctcgtcctccagtgacagctccagctctcccccagactcatgcagaggaggc
caggaatgcatccgttgcctggagagtgagatcatcgcagccctggtgccctgcggacac
aacctcttctgcatagaatgcgccaaccgcatctgccagagccccgaggccgtctgccca
gtgtgtcaggcaccagtcacccaggccatacggctgagcctgccctga

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