Oncorhynchus gorbuscha (pink salmon): 124034674
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Entry
124034674 CDS
T07892
Name
(RefSeq) LOW QUALITY PROTEIN: protein HIRA
KO
K11293
protein HIRA/HIR1
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ogo03036
]
124034674
Chromosome and associated proteins [BR:
ogo03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
124034674
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hira
Beta-prop_CAF1B_HIR1
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_WDR35_TULP_N
EIF3I
Beta-prop_IFT140_1st
WDR55
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_HPS5
HIRA_B
NBCH_WD40
WDR90_beta-prop_4th
WD40_like
Beta-prop_EIPR1
MIOS_WD40
Motif
Other DBs
NCBI-GeneID:
124034674
NCBI-ProteinID:
XP_046204100
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All DBs
Position
LG04:complement(78090612..78139730)
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AA seq
1033 aa
AA seq
DB search
MKLLKPSWVSHNGKPIFSVDIHPDGTKFATGGQGEDSGKVVIWNMAPVLREEDEKNVNIP
KMLCQMDNHLACVNCVRWSNTGLYLASGGDDKLVMVWKRAAFIGPSTVFGSSSKLANVEQ
WRCVTILRNHTGDVMDVAWSPHDVWLASCSVDNTIVIWNARKFPEIVASLKGHTGLVKGL
TWDPVGKYIASQADDHSLKVWRTMDWQQETNITKPFNECGGTTHVLRLSWSPDGQYLVSA
HAMNNSGPTAQIIERDGWKTNMDFVGHRKAVTVVKFNPKIFKKKQRNGSSPKPSCPYCCC
AVGSKDRSLSVWLTSLKRPLVVIHDLFDKSIMDISWTLNGLGILVCSMDGTVAYLNFSQD
ELGDPLNEDEKNAIHQNIYGKSLAITTEAQLSTTIIENPEMLKYQQERQRAEQANHRMTH
EAQAHKLTSVVNGESLEDIRKNLLKKQVETRTADGRRRITPLCIAQLDTGDFSPALFNSV
PILPGSASQLTSQLSSDSNTATSNLDPLSTPLGGQGPRXRQRQASSLNTTAMKSNLLLTT
STKMEPMKALDSRFTERSKVMPGVTISMAGLTPLDRVKDSSTLKELKDETSSDSEDKMVV
VKSPSFTKRKALDVDGGDNHLEKRKALDVDGGDNQLEKRKALDVDGGDNQVEKRKKGRPR
KMDAKMMMPVSHQTFQQATPSSEKEPCCVVAIPVSVLKLPTPTPQKAFTLQVSTEPPVYL
EVENDVSAVSGAKLSQLRCSREGREWDTLLPSRVITAAGSSDVVAVACEDRMLSVFSACG
RRLLPAILLPAPMSALHCSGFYVMALTACATLSVWDVQKQSAVVKNESLQTILSGTECTV
SQSLLTQQGVPVIGLSNGKSYCFNSSLETWNLIADKQDSLVQCADFKNCISSQDAPVSQG
PLALTQGHNLNAGRLASRLSSTPHHLQHGMTLVFLENQLASALTLRSSTEYHYWLLIYAR
FLVTEGSDYRLRELCKDLLGPVHKSAGSAWEPTTLGLRKRDLLRELLPVIGQNLHFQRLF
TEYQDQLELLGNK
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atgaagctattgaaaccaagttgggtcagtcacaatgggaaaccaatattttctgttgac
atccatcccgatggaacaaagtttgccacgggtggccagggcgaggactctgggaaggtt
gtcatatggaatatggctccagtgctccgagaggaggacgagaagaacgtgaacatcccc
aagatgctctgccagatggacaatcacttagcgtgtgtgaactgtgtccgctggtcaaac
accgggctttacctggcctccggaggagatgacaagttggtcatggtgtggaagagagct
gccttcattggaccgagtaccgtctttgggtcgagcagtaaattggccaacgtggagcag
tggcgttgtgtgaccatactgagaaaccacacaggggatgtcatggatgtggcgtggtcc
cctcacgacgtgtggttagcctcctgcagtgtggacaacaccattgtgatctggaatgct
cgcaaattcccagagatagtggcgtcgctgaagggacacacaggcctggtgaaggggctg
acgtgggaccctgtagggaagtacatcgcctcccaggctgacgaccacagcctgaaggtg
tggaggaccatggactggcagcaggagaccaacatcaccaagcccttcaacgagtgtggg
gggaccactcatgtgctgcgcctcagttggtctcctgacggacagtacctggtgtcagcc
cacgctatgaacaactcaggacccaccgctcagatcattgagagggacggctggaagacc
aacatggactttgtgggccaccgcaaggctgtcactgttgtgaaattcaaccccaaaatc
ttcaaaaagaaacagaggaatggaagttctcccaagcccagctgtccctactgctgctgt
gctgtgggaagcaaagaccgctccctctccgtttggctgacgtctctgaagcgccctcta
gtggtcatccacgacctgttcgataaatccatcatggacatctcatggaccctgaatggg
ctaggtatcttggtgtgctccatggacggtacagtggcatacctcaacttctctcaggac
gagctcggggaccccctcaacgaggacgagaagaacgccatccaccagaacatctatggt
aagagcctggccatcaccaccgaggcccaactctccaccaccatcatcgagaacccggag
atgctcaagtaccagcaggagaggcagcgtgcggagcaggccaaccacaggatgacccac
gaggcccaggcccacaaactcaccagcgtggtcaacggagagtccctggaggacatccgc
aagaacctgttgaagaaacaggttgagacgaggaccgcggacggcaggaggaggattact
cctctctgcatcgcccagctcgacacaggggatttctccccagccctcttcaacagcgta
cccatcctccctgggtcggccagccagctcacctcccagctttcctcagactccaacacg
gccacctccaatttggaccccctatccaccccactgggggggcaaggccccagatgacgc
caaagacaggcctcgtctcttaacaccacagccatgaagtccaacctgctcctaactacc
tccaccaagatggagccgatgaaagcccttgactccaggttcacagagaggtcaaaggtc
atgcccggggtcaccatctccatggcgggactcaccccgctagacagagtgaaagacagc
agcactttaaaggagctcaaggatgagacgagcagcgacagcgaggacaagatggttgtg
gtgaagtccccctccttcaccaagaggaaggccctagacgtggacggaggggacaaccat
ttggagaagaggaaggccctagacgtggacggaggggacaaccagttggagaagcggaag
gccctagacgtggacggaggggacaaccaggtagagaagaggaaaaagggacggcccagg
aaaatggacgcgaaaatgatgatgcccgtgtcccaccaaaccttccagcaggctacccct
tcatcagagaaggagccttgttgcgtcgttgctatccccgtgtcggtcctcaaactgccc
actcccacaccgcagaaagcatttactcttcaggtcagtacggagcccccggtgtacctg
gaggtggagaacgacgtctctgcggtgtccggagccaaactcagccagctccgctgttcc
agggagggcagggagtgggacacgttgctgcccagccgagtcattactgcagcgggcagc
agtgatgtggtggcagtggcgtgcgaggaccgcatgttgtctgtgttttcggcgtgtggc
cgccgcctactacccgccatcctgctgcccgcgcccatgtccgccctgcactgctcaggc
ttctacgtcatggccttgaccgcctgcgccaccctgtctgtctgggatgtccaaaaacag
agtgccgtggtgaaaaatgaatctttgcagaccattttatcaggcacagaatgcactgtg
tcccagtctttactgacacagcagggggtcccagtcattggtctctccaatgggaagtct
tactgcttcaactcctccctggagacatggaacctaatcgcagataaacaggactccctg
gtgcagtgtgccgacttcaagaactgcatctcctcccaggatgcacccgtgtcacaggga
cccctggctctcacacagggacacaacctcaatgcgggtcgcctggcctccagactgtcg
tccaccccccaccacctgcagcatggcatgaccctggttttcctggagaaccagctggcc
tcagccctcaccctgcgctccagcacagagtaccactactggctgctcatctatgcacgc
ttcctggtcactgagggctctgattatcggctacgtgagctctgtaaagacttactggga
ccagtgcacaagtctgccggcagtgcatgggagccgacaaccctgggcctgcggaagagg
gacctcttgagagagctgctgcctgtcataggacagaacttgcatttccagaggctcttc
acagagtaccaggaccagctggagctgctcggcaacaaatag
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integrated database retrieval system
