Oncorhynchus gorbuscha (pink salmon): 124034737
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Entry
124034737 CDS
T07892
Name
(RefSeq) STAM-binding protein-like A isoform X1
KO
K11866
STAM-binding protein [EC:
3.4.19.12
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124034737
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ogo01002
]
124034737
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124034737
04121 Ubiquitin system [BR:
ogo04121
]
124034737
Enzymes [BR:
ogo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
124034737
Peptidases and inhibitors [BR:
ogo01002
]
Metallo peptidases
Family M67
124034737
Membrane trafficking [BR:
ogo04131
]
Endosome - Lysosome transport
Others
Others
124034737
Ubiquitin system [BR:
ogo04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
124034737
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP8_dimer
JAB
Prok-JAB
DUF7602
MRP-S27
Motif
Other DBs
NCBI-GeneID:
124034737
NCBI-ProteinID:
XP_046204199
LinkDB
All DBs
Position
LG04:complement(85483951..85518665)
Genome browser
AA seq
424 aa
AA seq
DB search
MADHTDVSLPPEDRVRALTKKGSSVDVNEDVPPRRYFRSGVEMIRMANTYTEEGNAEHAF
VLYNKYITLFIEKLPKHRDYKTANIPEKKDTLKRLKEVAFPQAEVLKKALLKIYEQEHAQ
YLIKKKAEEAALAQQQSKQQALEAERERVVELQRRQREQEQFSAFEEMIRRQELEKERQR
ILQEFHAPGTPPPAAPLLPGIQGPPLPLAVSPTPPQSPGDSAGQVRPLPTFDRTLKPVSP
SGNSNTMDGMVDGIRQLAVPSELCSSFLRLAESNTSRAVETCGILCGKLLRNAFTVTHVI
VPKQNGGPDYCDTENEEELFLIQDQYDLITLGWIHTHPTQTAFLSSVDLHTHCSYQLMMP
EAIAIVCSPRFNETGYFRITDRGMDEISTCKQKGFHPHSKDPPLFTGAGHITVTEDRVTM
LDLR
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggcagaccacactgatgtcagcctgccccctgaggaccgtgtccgtgccctgaccaag
aagggcagctctgtggacgtgaacgaggacgttcctccccggaggtacttcaggtcaggc
gtggagatgatccgcatggccaacacctacaccgaggagggcaacgccgagcacgccttc
gtactctacaacaagtacatcacgctcttcattgagaagcttcctaaacatagagattac
aaaacagccaacattccagagaagaaggacaccttgaagaggctgaaggaggtggccttc
cctcaagcagaggtgctgaagaaggctcttctcaagatatatgagcaggagcatgcacag
tatctcatcaaaaagaaagcggaggaggcagccttggcgcagcagcagtcgaagcagcag
gcgctagaagcagagagggagcgtgtggtggaactgcagcgacgccaacgggaacaagag
cagttcagcgccttcgaggagatgatcagacggcaggagctggagaaggagaggcagcgt
atccttcaggagtttcatgctcctgggacccctccccccgctgcacccctcctccctggg
atccagggcccccctcttcccctggccgtgtcccccaccccccctcagagcccgggggac
agcgccggccaggtcagaccgctccccaccttcgaccggacgctcaaacctgtgagccct
agtgggaacagcaacaccatggatgggatggtggatggcatccggcagctggcagtgccc
tcagagctctgcagcagcttcctcaggctagctgagtccaacaccagccgagctgtggag
acctgtggcatcctctgtggcaaactgctgaggaatgcattcacagtgacccatgtgatc
gtgccgaagcagaacggagggccagactactgtgacacggagaacgaagaggagctgttc
ctgatccaggaccagtatgacctcatcaccctgggctggatacatacccaccccacccag
acagccttcctgtccagtgtcgatctccacacacactgttcctaccagctcatgatgccg
gaggctatcgctattgtctgctcacccaggttcaacgagacgggctacttcaggataaca
gaccgtgggatggatgagatctcaacgtgtaaacagaaaggtttccaccctcacagcaaa
gaccctcctctcttcactggagcaggacacatcacagtcaccgaggacagagtcaccatg
ttggacctgcggtga
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