Oncorhynchus gorbuscha (pink salmon): 124035026
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Entry
124035026 CDS
T07892
Name
(RefSeq) liprin-beta-1-like isoform X1
KO
K27096
liprin-beta
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124035026
Membrane trafficking [BR:
ogo04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
124035026
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
SAM_PNT
DUF16
Motif
Other DBs
NCBI-GeneID:
124035026
NCBI-ProteinID:
XP_046204385
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All DBs
Position
LG01:complement(23799945..23853151)
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AA seq
1023 aa
AA seq
DB search
MMSDASDMLAAALEQMDGIIAGSKAMDYSNGLFDCQSPTSPFMGSLRALNLLEDLRGVLE
LMDTEEREGLRCQIPDATADSLVDWLQQGHLMSNGHHISMSGDLYQERLSRLEGDKESLV
LQVSVLTDQVEAQGEKIRDLDMCLDEHREKLNATEDMLQQELLCRTALETQKQDLMAEVS
NLKLNSFEKDRLHFDFSDNEDMVLEMNELRYRVTEMESERVQYEKKLKSTKSLMAKLSSL
KIKVGQMQYEKQRKENKLQALKEELAMLRRHLEGRDGELRRLHDETGFRGITPVGMDSGD
RVSHPDETLKLRLKEKHVEVQRMKKAVESLMAANEEKDRKIEELRQSLLRYKKVQDRSSM
QGKKERTQDCESDESNSDSSLSVMSMTTTLVAMESARHALAGDEEVAGKSPDELEMHYGA
TEVSSPTPSPSVQSACDPKRGPELDQPEPESKAGGQEESQEAPLSCDTPQTLDSPNSGSQ
DNLYVSNSEKLFSATVQNKAVEEISKISERPPKSPSSSHPVTTEDDRFGNKKARSSFGRG
FFKVKGGKRTASTPNLAETEREEGTDHLDLAGLPQRSANSDSTNTLTSVTSTTSPECKKK
SKGIKGLFGKLRRSQSTTFNLDDNLSEAVEFKRGGVRATAGPRLGWSRDLQRLPKNDLDT
PFARWSKEQVCDWLQEQGLGLYLNMARVWISSGQTLLQGSQQDLERELGIKHPLHRKKLQ
LALQALGSEEDDNKGKLDYNWVTRWLDDIGLPQYKTQFDEGRLDGRMLHYMTVNDLLSLK
VGSVLHHLSIKRAIQVLRLNNYEPNCLRRRPSDENNITPAEISQWTNHRVMEWLRSVDLA
EYAPNLRGSGVHGGLMVLEPRFNVETMALLLNIPPNKTLLRRHLATHFNLLVGSEAQGLK
QDCLENPDYTLLTATAKVKPRKMSFGSFGSLRKKRQDDNEEYVCPMDVEMPKGRSFQKGY
ELQLYEDDIDRLEQMEDSEGTVRQIGAFSEGIQNLTSMLKDDEFFKEISNSPNPSITDDD
SNM
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atgatgtctgatgccagtgacatgttggcagcagccttggagcagatggatgggataata
gcaggctccaaggctatggactactctaacgggctgtttgactgccagtcgcccacctct
cccttcatgggcagcctgcgggcgctgaacctgctggaggacctccggggcgtgctggag
ctaatggacacagaggagagggagggcctgcgctgccagatccctgacgccaccgcagac
agcctggtggactggctgcagcagggacacctgatgtccaatggtcaccacatctccatg
agtggggacctctaccaggagagactgtctcggctggagggtgacaaggaatccctggtg
cttcaggtgagtgtgttgacagaccaggtagaggcgcagggggagaagataagggacttg
gacatgtgtctggatgagcaccgggagaaactgaacgccactgaggatatgctgcaacag
gaactcctgtgcagaacggctctagagactcagaaacaagacctgatggccgaggtgtcc
aacctgaagctgaactcatttgagaaggacagactgcactttgacttcagcgacaatgag
gacatggttctggagatgaatgaactgaggtacagagtgactgagatggagagtgaaaga
gtacagtatgagaagaaactgaaatccactaagtcattaatggccaagctttctagcctg
aaaatcaaagtgggccagatgcagtatgagaaacagaggaaggaaaacaaactgcaggcc
ctgaaggaggagctggcaatgctgaggaggcatctggagggaagggacggagagctgagg
aggttacacgacgagactgggttcagaggcatcacaccggttggaatggacagtggagac
agagtctctcacccagatgaaactcttaaattgaggctgaaagagaaacatgtggaagtg
cagagaatgaaaaaagcagtggaatcactgatggcagccaatgaggagaaggatcgtaaa
attgaggagttgaggcagtcgctgctgcgctacaagaaggtccaggacaggagttcaatg
caagggaagaaagagagaacccaagactgcgagagtgacgagagtaacagcgacagctcc
ctctccgtgatgtcaatgacaaccaccctggttgccatggagtcggcgaggcacgctcta
gccggagacgaggaagtagcagggaaaagcccagacgagctggagatgcactatggagct
actgaagtgtcttcgcccacacccagcccttcagtccagtcagcatgcgatccaaaaagg
gggccagagctggaccaacctgaaccagagagcaaagcagggggccaggaagagtcacag
gaggcccccctttcatgtgatactccacagaccctagatagccccaattcagggagtcag
gacaacttgtatgtcagcaacagcgaaaagctcttttctgctactgttcagaataaggct
gtggaggagatcagtaagatcagcgagcgcccgcccaagtctccctcttcgtctcacccc
gtgaccacggaggatgaccgcttcggtaacaagaaggctcgctcctcctttggccggggc
ttcttcaaggtcaagggaggcaagaggacagccagcacccctaacctggctgagacagag
cgagaggagggcactgaccatctggacctggccggtctaccccagaggtcagccaacagc
gacagcaccaacacactgaccagtgtgacctccactacatcccctgagtgcaagaagaag
tccaagggaatcaaggggctctttggaaagctgaggagaagtcagtccaccacattcaac
ctggatgacaacctatcagaggcggtcgagttcaagagaggcggagtccgagccacagca
ggtcccagactgggctggtcccgtgacctacagcgattacccaagaatgacctggacacc
ccgtttgcccgctggtccaaggagcaggtgtgtgactggctgcaggagcagggactgggg
ctctacctgaacatggcccgcgtgtggatctcttctggacagactctgctgcagggctca
cagcaggacctagagagggagctgggcattaaacacccactgcacaggaagaagctccaa
ctggccctgcaggccctgggctctgaggaggatgacaacaagggcaaactggactacaac
tgggtgaccaggtggctggatgacattggcctgcctcagtataagacccagtttgatgag
gggaggctggacggccgcatgctacactacatgacagtaaatgacctgctatctctgaag
gtgggcagtgtgctccaccacctcagcatcaagagagccattcaggtgctgcgcctcaac
aactacgagcccaactgcctgcgccgacggccctctgacgagaacaacatcacgccagca
gagatctcccagtggaccaatcacagagtgatggaatggctgagatcagtggacctggcg
gagtatgcccccaacctgaggggcagcggcgttcacgggggactcatggtgctggagcca
cggttcaacgtggagactatggccctgctgctgaatattccccccaacaagaccctgctg
cggaggcacctggccacccacttcaatctgctggtgggctctgaggcccaggggctcaaa
caggattgtctggagaatcctgactacaccctgctcaccgccaccgccaaggtcaagccg
aggaagatgtcgttcgggagcttcggcagcctgaggaagaagaggcaggatgacaatgag
gagtatgtctgccccatggacgtggagatgccaaagggacgtagcttccagaaaggctat
gagcttcagctctacgaggacgacattgaccggctagagcagatggaggactcagaggga
actgtgaggcagatcggagctttctccgagggcatccaaaacttgacgagcatgctgaaa
gacgatgaatttttcaaggagatctccaactcacccaaccccagcataacagatgacgat
tccaacatgtga
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