Oncorhynchus gorbuscha (pink salmon): 124035290
Help
Entry
124035290 CDS
T07892
Symbol
si:dkey-13n15.2
Name
(RefSeq) protein transport protein Sec24C isoform X1
KO
K14007
protein transport protein SEC24
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
124035290 (si:dkey-13n15.2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124035290 (si:dkey-13n15.2)
Membrane trafficking [BR:
ogo04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
124035290 (si:dkey-13n15.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
124035290
NCBI-ProteinID:
XP_046204706
LinkDB
All DBs
Position
LG05:complement(85573878..85594997)
Genome browser
AA seq
1121 aa
AA seq
DB search
MDIPAANQSYGHGGQPGVCHNGWSATTPPTGLGCTTAQGLSSDPLPSLQGLNLGPASHQS
PSNNIPQAMAQLQYSHQGCLSSLPTPPFRNQSPSALIPCLNQEPHIPHVHMGNYISYNIP
PSSTLVPLKQGPSASGPPSTIPSSNQGPQNTVSPPVSSSPLYPPYLYANQGFVNGPPVTL
TRPNQGFVNGPPVTLTSPNQGFVNGPPVTLTRPNQGFVNGPPVTLTSPNQGFVNGPPVTL
TSPNQGFVNGPPVTLTSPNQGPPNSSFSSMSPCGSQSQQCSHPYPPQLTSPVQQQPQWVL
PQQHYSHSGVMYKPGATSHPVQEDTTMQPSCPSLGDSGVSGPSSPISESRYGLHPQLLPS
AVRMMEEDRTAWEAKVFVSEPISSLPPLATTDCVMEDRGNCSPRFILSTSYCVPCEGQTA
LQSHLPLGALVSPLAKLHTGERPLSVCMEADTVKGCGECGAYMCSAMGWQDCGQRFYCPF
CGKLREVGWQHYQPTQGVEGNRVDREQRPELSLGSYEILDSQQDVPASVLLLAVDVSAAA
LRGGHLELISQQLRSLLTSLNREEGAFQSDVRVGLMTYDSRIHLYDLSPALSRPHMLVVT
ETEDLQLPVREGLLVPLKDCIDSINSVLQRIPLFSADFEGAGGVLLELPVKAGLVVLQEL
GCPGKLLVFQTAPFIEGTHTHNSSSFFSSNKPKSLFQPPDPAVSLAKECVSQGCGVHLFV
FSQQDVGGAWPGHVPYLTGGELHCYHSLQGELDRERFSSDLRRTVETETGYRATLRVHVS
KDLRVSGCYGSFVPGPNPAHVTMATLDWRTTLAVELTHSRALDEKRGVVVQTVLSYTSQQ
GERRTRVHSLSLCCSHHLLDTFCNCQAQTLLTFYCKKMYCAVLERPLQELREELQTEVTE
SLACYRKHCSSSSVSPGQLVLPQHLKTLPVYLNSLRKSEVLLPGLRSSVHQRLQLRCQVV
SMDTKTTAGHFYPLLLPLPVGGDTSSPLSLGEAVRCTAASLDHGGLYLVHGPLVLLLWVG
HNVSNTSLVQLFNITCLSTLPSGETKLPVLDNPLSVSVRSLINTLNSQTHYTRKLRVVKQ
GDSCEEALQRLLVEDKSPNGGASYADFLYHLHVNSIQLLVR
NT seq
3366 nt
NT seq
+upstream
nt +downstream
nt
atggacattccagcagccaatcagagctacggacatggcgggcagcccggggtgtgtcat
aatggctggtcagcaaccacacccccgaccggtcttggatgtaccactgcccaaggactc
tccagtgaccctctacccagcttacagggtctgaacctgggcccagcctcacaccagagt
ccttctaataacatccctcaagccatggctcagttacagtactcacaccagggctgtctc
agcagtcttcctacgcccccatttaggaaccaatcaccttcagctcttataccatgcctg
aatcaagagcctcacataccacatgtacacatgggtaattatatttcctacaacattcct
ccatcatcaacactcgtccctctgaaacaaggtccgtcagctagtgggcctccatccacg
ataccgtcttcaaaccagggtccccagaatactgtctctcctccagtctcttcctcccct
ctatatcctccatatctgtatgcaaaccaaggctttgtgaatggccctcctgtgacgttg
acaagaccaaaccaaggctttgtgaatggccctcctgttacgttgacaagtccaaaccaa
ggctttgtgaatggccctcctgttacgttgacaagaccaaaccaaggctttgtgaatggc
cctcctgttacgttgacaagtccaaaccaaggctttgtgaatggccctcctgtgacgttg
acaagtccaaaccaaggctttgtgaatggccctcctgttacgttgacaagtcccaaccaa
ggacctcccaacagcagtttttcatccatgtcaccatgtgggagccagagccaacagtgt
tcacacccgtatcctccacaactcacctcaccagtccagcagcaacctcaatgggtcctg
cctcagcaacactatagtcacagtggtgtaatgtacaagcctggtgccacctcacatcct
gtacaggaggataccaccatgcaaccgtcctgtccatctctgggggacagtggggtgtct
ggccccagctcacctatttcagagtcacgctatggcctacaccctcagcttctacccagc
gctgtgcgtatgatggaggaggacaggacagcgtgggaggcgaaggtgtttgtgtctgaa
cccatctcctctctacctccgctggctaccacagactgtgtcatggaggaccgaggtaac
tgcagtcctcggttcatcctttctacctcctactgcgttccgtgtgagggccagacggcc
ctccagagccacctaccactgggggccctagtcagccctctggctaagctacacacagga
gagcgccccctgtctgtgtgtatggaggcagacactgtaaagggctgtggggagtgtggg
gcttacatgtgttcagctatgggatggcaggactgtggacagagattctactgcccattc
tgtgggaaactccgtgaagttggatggcagcattaccagccaacacagggagtagagggg
aacagagtggacagagagcagagacctgagctcagtctgggctcctatgagatactggac
agtcaacaggatgtgcctgcttctgtgttgctcctggccgtggatgtgtctgctgcagca
ctgagaggaggacacctggagctcatcagtcagcagctacgttctctactcacatcacta
aatagggaggaaggtgcgttccaatcagatgtccgtgtggggttgatgacctatgacagc
cggatccacctctatgacctcagccctgccctgtcccgcccacacatgctggtcgtcacg
gagacagaggacctgcagcttcctgtgagggaggggcttctggttccactcaaagactgc
atagacagtatcaacagtgtcctgcagcgtatccctctgttcagtgcagactttgagggg
gcaggtggagttctcctggagctgcctgtcaaggctggactggtcgttctacaggagttg
ggttgtcctggcaagctgctggtcttccaaactgctcccttcatcgaggggacacacaca
cacaactcctctagcttcttcagctccaacaaaccaaagtctctgtttcagcctccggac
cctgcagtctcattggctaaggagtgtgtcagtcagggctgtggcgtgcacctgtttgtg
ttctcccagcaggatgtgggcggggcttggccgggacatgttccttacctgacaggtgga
gagctgcactgctaccacagtctccagggagagttggacagggagcgtttcagcagtgac
ctgaggaggactgtagagacagagacgggctatagggccacactcagggtgcatgtcagt
aaagatctgcgcgtgtcagggtgttatggctcgttcgtccccgggcccaaccccgcccac
gtcaccatggcaacccttgattggcgtacgacactggccgttgagttgacacacagcaga
gctctggacgaaaagaggggcgtggtcgtacagaccgtcctgtcctacaccagccagcag
ggagagaggaggaccagggtccacagtctgtctctgtgctgctcacaccacctactggac
accttctgtaactgccaggcccagactctgctcaccttctactgcaagaagatgtactgt
gccgtgttggagcgccctctacaggagctgagagaggaactgcagacagaggtgacagag
tccttggcctgctataggaaacactgcagctcctcctctgtgtccccgggacagctggtc
ctaccccagcacctgaagaccctgccagtctacctcaacagcctgaggaagagtgaagtt
ctgcttcccggcctccgcagttcagtacaccaacgcctgcagctccgctgtcaagtggtc
tccatggataccaagaccacagcaggacacttctaccctctgctgctaccactgccagta
ggtggcgatacctccagtcctctcagcctaggggaggctgttcgctgcactgctgctagc
ctggaccatggaggtctctacctggtccacggacccctggttctgctactctgggtgggc
cacaacgtctccaacacctccctggtccaactcttcaacatcacctgtctgtccacacta
ccctctggagagacgaagctgcctgtgctggacaaccctctgtctgttagtgtgaggtca
ctcatcaacaccctgaactcacagacacactatactcgcaagctgcgtgtggtgaagcag
ggggacagctgtgaggaggctctacaacgcctcctggtagaagataagagtcccaacggg
ggagcgagctacgctgacttcctgtaccacctccacgtcaactctatacaactgctggtt
cgttag
DBGET
integrated database retrieval system
