KEGG   Oncorhynchus gorbuscha (pink salmon): 124035348
Entry
124035348         CDS       T07892                                 
Name
(RefSeq) integrin alpha-11-like
  KO
K06587  integrin alpha 11
Organism
ogo  Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04510  Focal adhesion
ogo04512  ECM-receptor interaction
ogo04810  Regulation of actin cytoskeleton
ogo04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:ogo00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    124035348
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    124035348
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    124035348
   04810 Regulation of actin cytoskeleton
    124035348
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:ogo04515]
    124035348
Cell adhesion molecules [BR:ogo04515]
 Integrins
  Integrin alpha subunits
   124035348
SSDB
Motif
Pfam: VWA FG-GAP VWA_2 Integrin_A_Ig_1 Integrin_A_Ig_2 FG-GAP_3 FG-GAP_2 VWA_CoxE Ku_N
Other DBs
NCBI-GeneID: 124035348
NCBI-ProteinID: XP_046204769
LinkDB
Position
LG05:complement(8264834..8344317)
AA seq 1113 aa
MEYCRAVFLWICCSLLPGLHDGFNIHTKNHRIIKGPKQAQFGYTVQQHVAGGQKWLLVGA
PYETNGHHQTGDVYKCPLGKRSNGSCSKLNLGRISLTNVAERKDKMRLGMTLTTNPKDNS
FVVCGPLWSYECGSSYYSTGICSRVNASFKFSKTIAPAFQRCETYMDIVIVLDGSNSIYP
WTEVQAFLINILQKFYIGPGQIQVGVVQYGEKVVHEFHLNDYKSVEEVVKRASNIHQRGG
EETNTALGINVARSEAFKRGARRGAKKVMIVITDGESHDSPDLQQAIEDSEKDGITRYAI
AVLGYYNRRGINPEAFLNEIKYIASDPDDKHFFKVTDESALKDIVDALGDRIFSLEGTSK
NGTAFGLQMSQAGFSSHFVEDGILVGAPGAYDWNGAVLKETRQGKVVPPKSSYSQEFPEE
LKNHGAYLGYTVTSVVSARNGRLYVAGAPRFNHTGKVIIFTLKNTGNLTILHSLKGQQIG
SYYGSEISPVDIDGDGVTDNLLVAAPMFFSGGWEKGKVYIYRVTELNRFVLEGALEIQDH
GQNARFGSSLAPVPDLNGDGFNDVVVGAPLEDDHRGAIYVFFSQRNRILRKYKQRIAALD
IASGLRYFGRSIHGSMDMNEDGLVDLAVGSLGAAVLLWSRSVVRIHANIRFEPSKINVFV
KDCERGGKDVTCMSAIVCLNVTARTAIPPTQEVAITYNTTIGERRFNPRAIMDDPDKLLF
QNLTLLSGEETCQHIYFHVMETTDYVRPIVFTVAVALQDLDQGPALDDTWPTTFRTELPF
WNGCDEDDRCIPGLSLQSTTDLLSWRQFCGNAVHSRGAMCRRLSEGGPEGSERVMEGSRR
RMVVDVRLENRGENAYGARLNITYTPNLRFSSLIVKDNSDMKIECRSEDRQRHEKTCNVS
APFMRAKTQPSAVFPVEASPVKPAVFPVEDSPVKPAVFPVEASPVKPAVFPVEASPVKPT
VFPVEASPVKPAVFPVEDSPVKPAVFPVEASPVKPAVFPVERIRLGNTLLSCLELAQSKG
EYLRCLELAQSKGEYLRCLELAQSKGEYLRCLELAQSKGEYLRCLELAQSRGEYLRCLEL
AQSRGEYLRCLELAQSKGEYLRCLELAQSKEST
NT seq 3342 nt   +upstreamnt  +downstreamnt
atggagtactgccgcgctgtgtttctctggatctgctgcagcctgttaccagggctccat
gatggtttcaacatccacaccaagaaccacaggatcatcaagggccccaagcaggcccag
tttggatacactgtgcagcagcacgttgccgggggacaaaagtggttattggtgggagct
ccatatgaaaccaatggtcaccaccagacaggggatgtgtacaaatgcccattggggaaa
cggtccaatggcagctgctccaaactcaacctaggaaggatttctctgactaatgtcgcc
gagcgaaaagacaagatgaggctggggatgacgctgacaaccaaccccaaagacaacagc
tttgtggtctgtggacccctgtggtcctatgagtgtggcagctcatactacagcactgga
atatgctctcgagtcaacgccagcttcaaattctccaaaaccatagctccagccttccag
aggtgtgagacctacatggatatagtgatcgttctggatggttccaactccatctacccc
tggacggaggtgcaagcctttcttatcaacattctacagaagttctacattggaccaggc
cagatacaggttggagtggtgcagtatggggagaaggtggtgcacgagttccatctgaat
gactacaagtcggtggaggaggtggtgaagagagcaagcaacatccatcagagaggtgga
gaggaaaccaacacggcactcggcatcaacgtcgctcgctcagaagcattcaaacgagga
gcccgacgaggcgccaagaaggtgatgatcgtgatcactgacggggagtcacatgacagc
cctgaccttcaacaggccatcgaggacagcgagaaggatggcatcacccgctatgccatc
gctgtgcttggctactacaaccggcgtggaatcaacccagaggcattcttgaatgaaatc
aagtatatcgctagtgaccctgatgacaagcacttcttcaaggtgactgatgagtctgcc
ttgaaggacattgtggacgcgcttggggataggatcttcagtttggaagggaccagtaag
aacgggacagcctttggcctccagatgtctcaggctggcttctcttcacacttcgtggag
gatgggatcctggtgggggcaccaggggcctacgactggaatggagccgtcctgaaggag
acccggcaggggaaggtggttccacccaagtcctcctactcacaggaattcccagaggag
ctgaagaaccacggcgcctacctaggttacacagtaacatcggtggtgtcggccaggaat
ggtcggctgtacgtggcaggggcaccgcggttcaaccatactggcaaggtcatcatcttc
accctgaagaacactggtaacctcaccatcctgcactccctcaaaggacaacagatcggg
tcgtactatgggagtgagatctccccggtggatatagatggtgacggagtaacagacaac
ctactggtggcagctcccatgttcttcagtggaggctgggagaagggcaaggtgtacatc
tacagagtgactgagctgaatcgtttcgtcctggagggagcgttggagatccaggaccat
ggtcagaacgctcggttcggctcctcgctggccccggtccctgacctgaacggggacggc
ttcaacgacgtggtggtgggggctcctctggaggatgaccacagaggagctatctacgtc
ttcttcagccaacgcaacaggattctgaggaaatacaaacagaggatagctgcgttagac
atcgctagtggcctgcgctactttggccgtagtatccatggcagtatggacatgaatgag
gatggcctggtggacttggccgtgggatccctgggggcggccgtgcttctatggtctcgc
agtgtcgtccgaattcacgccaacatcaggtttgaacccagcaagatcaacgtctttgtg
aaggactgtgagaggggaggcaaggacgtgacctgcatgtcagccatagtgtgtctaaac
gtcaccgcccggacagccatacctcctacacaggaagtggctatcacttacaacaccacc
attggggagcgccgattcaaccccagagccataatggacgaccctgataaactgctgttt
caaaacctgaccctgctttctggagaggagacctgtcaacacatctacttccatgtcatg
gagaccacggactacgtgaggcccatcgtgttcactgtggcagtggcactgcaggatctc
gaccagggccctgcgctggacgacacctggcccaccaccttcaggactgagcttcccttc
tggaatggctgtgatgaggacgaccgttgtataccaggcctgtccttacagagtacaact
gacctgctgtcttggaggcagttctgtgggaatgcagtccactccaggggtgcgatgtgt
cgacgtctgtccgaaggagggccggaggggtcagagcgagtgatggagggatcgaggcgg
aggatggtggtggacgttcgtctggagaacaggggagaaaacgcctacggagcccgcctc
aacatcacctacactcctaacctacgattctctagtctcatagtcaaggacaactcggat
atgaagatagagtgtcgcagtgaggacagacagaggcatgagaagacctgcaacgtcagt
gctcccttcatgagagccaagacgcagcccagtgcagtgttccctgtagaggccagccca
gtgaaaccagcagtgttccctgtagaggacagcccagtgaaaccagcagtgttccctgta
gaggccagcccagtgaaaccagcagtgttccctgtagaggccagcccagtgaaaccaaca
gtgttccctgtagaggccagcccagtgaaaccagcagtgttccctgtagaggacagccca
gtgaaaccagcagtgttccctgtagaggccagcccagtgaaaccagcagtgttccctgta
gagagaatccgtttgggaaacactttgctcagttgtcttgagttggcccagagtaaagga
gagtacctaaggtgtcttgagttggcccagagtaaaggagagtacctaaggtgtcttgag
ttggcccagagtaaaggagagtacctaaggtgtcttgagttggcccagagtaaaggagag
tacctaaggtgtcttgagttggcccagagcagaggagagtacctaaggtgtcttgagttg
gcccagagcagaggagagtacctaaggtgtcttgagttggcccagagtaaaggagagtac
ctaaggtgtcttgagttggcccagagcaaggagagtacctaa

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