Oncorhynchus gorbuscha (pink salmon): 124035348
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Entry
124035348 CDS
T07892
Name
(RefSeq) integrin alpha-11-like
KO
K06587
integrin alpha 11
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04510
Focal adhesion
ogo04512
ECM-receptor interaction
ogo04810
Regulation of actin cytoskeleton
ogo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
124035348
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
124035348
09142 Cell motility
04820 Cytoskeleton in muscle cells
124035348
04810 Regulation of actin cytoskeleton
124035348
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ogo04515
]
124035348
Cell adhesion molecules [BR:
ogo04515
]
Integrins
Integrin alpha subunits
124035348
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
FG-GAP
VWA_2
Integrin_A_Ig_1
Integrin_A_Ig_2
FG-GAP_3
FG-GAP_2
VWA_CoxE
Ku_N
Motif
Other DBs
NCBI-GeneID:
124035348
NCBI-ProteinID:
XP_046204769
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Position
LG05:complement(8264834..8344317)
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AA seq
1113 aa
AA seq
DB search
MEYCRAVFLWICCSLLPGLHDGFNIHTKNHRIIKGPKQAQFGYTVQQHVAGGQKWLLVGA
PYETNGHHQTGDVYKCPLGKRSNGSCSKLNLGRISLTNVAERKDKMRLGMTLTTNPKDNS
FVVCGPLWSYECGSSYYSTGICSRVNASFKFSKTIAPAFQRCETYMDIVIVLDGSNSIYP
WTEVQAFLINILQKFYIGPGQIQVGVVQYGEKVVHEFHLNDYKSVEEVVKRASNIHQRGG
EETNTALGINVARSEAFKRGARRGAKKVMIVITDGESHDSPDLQQAIEDSEKDGITRYAI
AVLGYYNRRGINPEAFLNEIKYIASDPDDKHFFKVTDESALKDIVDALGDRIFSLEGTSK
NGTAFGLQMSQAGFSSHFVEDGILVGAPGAYDWNGAVLKETRQGKVVPPKSSYSQEFPEE
LKNHGAYLGYTVTSVVSARNGRLYVAGAPRFNHTGKVIIFTLKNTGNLTILHSLKGQQIG
SYYGSEISPVDIDGDGVTDNLLVAAPMFFSGGWEKGKVYIYRVTELNRFVLEGALEIQDH
GQNARFGSSLAPVPDLNGDGFNDVVVGAPLEDDHRGAIYVFFSQRNRILRKYKQRIAALD
IASGLRYFGRSIHGSMDMNEDGLVDLAVGSLGAAVLLWSRSVVRIHANIRFEPSKINVFV
KDCERGGKDVTCMSAIVCLNVTARTAIPPTQEVAITYNTTIGERRFNPRAIMDDPDKLLF
QNLTLLSGEETCQHIYFHVMETTDYVRPIVFTVAVALQDLDQGPALDDTWPTTFRTELPF
WNGCDEDDRCIPGLSLQSTTDLLSWRQFCGNAVHSRGAMCRRLSEGGPEGSERVMEGSRR
RMVVDVRLENRGENAYGARLNITYTPNLRFSSLIVKDNSDMKIECRSEDRQRHEKTCNVS
APFMRAKTQPSAVFPVEASPVKPAVFPVEDSPVKPAVFPVEASPVKPAVFPVEASPVKPT
VFPVEASPVKPAVFPVEDSPVKPAVFPVEASPVKPAVFPVERIRLGNTLLSCLELAQSKG
EYLRCLELAQSKGEYLRCLELAQSKGEYLRCLELAQSKGEYLRCLELAQSRGEYLRCLEL
AQSRGEYLRCLELAQSKGEYLRCLELAQSKEST
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
atggagtactgccgcgctgtgtttctctggatctgctgcagcctgttaccagggctccat
gatggtttcaacatccacaccaagaaccacaggatcatcaagggccccaagcaggcccag
tttggatacactgtgcagcagcacgttgccgggggacaaaagtggttattggtgggagct
ccatatgaaaccaatggtcaccaccagacaggggatgtgtacaaatgcccattggggaaa
cggtccaatggcagctgctccaaactcaacctaggaaggatttctctgactaatgtcgcc
gagcgaaaagacaagatgaggctggggatgacgctgacaaccaaccccaaagacaacagc
tttgtggtctgtggacccctgtggtcctatgagtgtggcagctcatactacagcactgga
atatgctctcgagtcaacgccagcttcaaattctccaaaaccatagctccagccttccag
aggtgtgagacctacatggatatagtgatcgttctggatggttccaactccatctacccc
tggacggaggtgcaagcctttcttatcaacattctacagaagttctacattggaccaggc
cagatacaggttggagtggtgcagtatggggagaaggtggtgcacgagttccatctgaat
gactacaagtcggtggaggaggtggtgaagagagcaagcaacatccatcagagaggtgga
gaggaaaccaacacggcactcggcatcaacgtcgctcgctcagaagcattcaaacgagga
gcccgacgaggcgccaagaaggtgatgatcgtgatcactgacggggagtcacatgacagc
cctgaccttcaacaggccatcgaggacagcgagaaggatggcatcacccgctatgccatc
gctgtgcttggctactacaaccggcgtggaatcaacccagaggcattcttgaatgaaatc
aagtatatcgctagtgaccctgatgacaagcacttcttcaaggtgactgatgagtctgcc
ttgaaggacattgtggacgcgcttggggataggatcttcagtttggaagggaccagtaag
aacgggacagcctttggcctccagatgtctcaggctggcttctcttcacacttcgtggag
gatgggatcctggtgggggcaccaggggcctacgactggaatggagccgtcctgaaggag
acccggcaggggaaggtggttccacccaagtcctcctactcacaggaattcccagaggag
ctgaagaaccacggcgcctacctaggttacacagtaacatcggtggtgtcggccaggaat
ggtcggctgtacgtggcaggggcaccgcggttcaaccatactggcaaggtcatcatcttc
accctgaagaacactggtaacctcaccatcctgcactccctcaaaggacaacagatcggg
tcgtactatgggagtgagatctccccggtggatatagatggtgacggagtaacagacaac
ctactggtggcagctcccatgttcttcagtggaggctgggagaagggcaaggtgtacatc
tacagagtgactgagctgaatcgtttcgtcctggagggagcgttggagatccaggaccat
ggtcagaacgctcggttcggctcctcgctggccccggtccctgacctgaacggggacggc
ttcaacgacgtggtggtgggggctcctctggaggatgaccacagaggagctatctacgtc
ttcttcagccaacgcaacaggattctgaggaaatacaaacagaggatagctgcgttagac
atcgctagtggcctgcgctactttggccgtagtatccatggcagtatggacatgaatgag
gatggcctggtggacttggccgtgggatccctgggggcggccgtgcttctatggtctcgc
agtgtcgtccgaattcacgccaacatcaggtttgaacccagcaagatcaacgtctttgtg
aaggactgtgagaggggaggcaaggacgtgacctgcatgtcagccatagtgtgtctaaac
gtcaccgcccggacagccatacctcctacacaggaagtggctatcacttacaacaccacc
attggggagcgccgattcaaccccagagccataatggacgaccctgataaactgctgttt
caaaacctgaccctgctttctggagaggagacctgtcaacacatctacttccatgtcatg
gagaccacggactacgtgaggcccatcgtgttcactgtggcagtggcactgcaggatctc
gaccagggccctgcgctggacgacacctggcccaccaccttcaggactgagcttcccttc
tggaatggctgtgatgaggacgaccgttgtataccaggcctgtccttacagagtacaact
gacctgctgtcttggaggcagttctgtgggaatgcagtccactccaggggtgcgatgtgt
cgacgtctgtccgaaggagggccggaggggtcagagcgagtgatggagggatcgaggcgg
aggatggtggtggacgttcgtctggagaacaggggagaaaacgcctacggagcccgcctc
aacatcacctacactcctaacctacgattctctagtctcatagtcaaggacaactcggat
atgaagatagagtgtcgcagtgaggacagacagaggcatgagaagacctgcaacgtcagt
gctcccttcatgagagccaagacgcagcccagtgcagtgttccctgtagaggccagccca
gtgaaaccagcagtgttccctgtagaggacagcccagtgaaaccagcagtgttccctgta
gaggccagcccagtgaaaccagcagtgttccctgtagaggccagcccagtgaaaccaaca
gtgttccctgtagaggccagcccagtgaaaccagcagtgttccctgtagaggacagccca
gtgaaaccagcagtgttccctgtagaggccagcccagtgaaaccagcagtgttccctgta
gagagaatccgtttgggaaacactttgctcagttgtcttgagttggcccagagtaaagga
gagtacctaaggtgtcttgagttggcccagagtaaaggagagtacctaaggtgtcttgag
ttggcccagagtaaaggagagtacctaaggtgtcttgagttggcccagagtaaaggagag
tacctaaggtgtcttgagttggcccagagcagaggagagtacctaaggtgtcttgagttg
gcccagagcagaggagagtacctaaggtgtcttgagttggcccagagtaaaggagagtac
ctaaggtgtcttgagttggcccagagcaaggagagtacctaa
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integrated database retrieval system