Oncorhynchus gorbuscha (pink salmon): 124035464
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Entry
124035464 CDS
T07892
Name
(RefSeq) nuclear receptor ROR-alpha A-like isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogo03000
]
124035464
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ogo03310
]
124035464
Transcription factors [BR:
ogo03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
124035464
Nuclear receptors [BR:
ogo03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
124035464
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
124035464
NCBI-ProteinID:
XP_046204872
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All DBs
Position
LG05:complement(5386579..5766694)
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AA seq
533 aa
AA seq
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MEIYMESSPDPASSDAGNSVSKPATPVMDTPVNLETLQTDHHHQTPGRGQSRSGSNKGSA
AAKKTHTSQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNAGYSCPRQKNCLID
RTSRNRCQHCRLQKCLTVGMSRDAVKFGRMSKKQRDSLYAEVQKHRLQQAQQLQRDLHPQ
NPEEVEPLSPHYGLTDLPEDLGGYMEENSPGGGNGPASKGGSESGGVGGFYLDIQPSPDQ
SGLDINGIKSEPLCDYGSDQGFFPYCSFTNGDTSPTVSMAELEHLGQNISKSHQETCQYL
REELQSMTWQAFLQEEIETYQTKPEEVMWQLCAIKITEAIQYVVEFAKRIDGFMELCQND
QIVLLKAGSLEVVFIRMCRAFDSQNSTVYFDGKYAGTDVFKALGCDDLIRLVFEFGKSMS
VIHLSEEEIALFSAYVLMSADRTWLQEKVKVEKLQQKIQLALQHVLQQNGREDVVLTKLI
CKVSTLRALVSRHTEKLTAFRATYPDIVQAHFPPLYRELFGSDFEQGSMSIDG
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atggagatttatatggagtcctcaccggaccctgcttccagtgacgcgggaaacagcgtc
tctaaaccggctactccagtcatggacaccccggtgaatctggagaccctccaaacggac
caccaccaccaaacccctggtagaggacagagtcgttccggctccaacaaagggtcggca
gcagcgaagaagacacatacatctcaaattgaaattattccttgcaagatatgtggagat
aagtcgtcaggtatccactacggcgtgatcacctgcgaaggctgcaagggtttcttcagg
aggagccagcagagtaatgcagggtactcctgccctcgtcagaagaactgtttgattgac
aggaccagcagaaaccgctgccaacactgtagactgcagaaatgcctgaccgtgggcatg
tcacgggacgcggtgaagtttggccgtatgtccaagaagcagagagacagcctgtatgct
gaggtccagaagcaccgtctccagcaggcccagcagctgcagagagacctccatccccag
aacccggaggaggtcgagcctctctctccccactacggcctcaccgacctcccggaagac
ctgggagggtacatggaggaaaacagccctggggggggtaacggcccagcctccaagggg
ggctctgagtcgggaggagtgggggggttctacctggacattcagccgtctcctgatcag
tctggactggatattaacggtataaaatcggagcctctttgtgattatggttccgaccag
ggtttcttcccctactgttccttcaccaacggagacacatctcccacagtatctatggct
gagctagaacacctaggccagaacatctccaagtcccaccaggagacgtgtcagtacctg
agggaggagctacagagcatgacctggcaggccttcctccaggaggagatagagacctac
cagacgaagccggaggaggtgatgtggcagctgtgtgccatcaagataacggaggccatc
cagtacgtggtggagttcgccaaacgcatcgacggcttcatggagctctgtcagaacgac
cagatagtgttgctcaaagcagggtctcttgaggtggtgttcatcaggatgtgtcgtgcc
tttgactctcagaacagcaccgtctacttcgatgggaagtacgctgggaccgacgtcttc
aaagcgttaggttgtgacgatctgattcgcttagtctttgagtttgggaagagcatgtct
gtcatccatctctctgaggaggagatcgctctcttctcagcgtacgtcctgatgtctgcg
gatcggacgtggcttcaggagaaggtgaaggtagagaagctgcaacagaagatccagctg
gctctccaacatgtccttcagcagaacggcagagaggatgtggttctcactaagttgata
tgcaaagtgtcgaccctgcgggcgttagtcagccggcacacagagaagctgacggccttc
agagcaacctacccagacattgtccaagcccacttccctccactatacagggagctgttt
ggctcagactttgaacagggctccatgtccatagacggctag
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