Oncorhynchus gorbuscha (pink salmon): 124035489
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Entry
124035489 CDS
T07892
Name
(RefSeq) LOW QUALITY PROTEIN: integrin alpha-11-like
KO
K06587
integrin alpha 11
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04510
Focal adhesion
ogo04512
ECM-receptor interaction
ogo04810
Regulation of actin cytoskeleton
ogo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
124035489
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
124035489
09142 Cell motility
04820 Cytoskeleton in muscle cells
124035489
04810 Regulation of actin cytoskeleton
124035489
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ogo04515
]
124035489
Cell adhesion molecules [BR:
ogo04515
]
Integrins
Integrin alpha subunits
124035489
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_1
VWA_2
Integrin_A_Ig_2
FG-GAP_3
Integrin_A_Ig_3
FG-GAP_2
VWA_CoxE
Ku_N
Motif
Other DBs
NCBI-GeneID:
124035489
NCBI-ProteinID:
XP_046204898
LinkDB
All DBs
Position
LG05:8179512..8384355
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AA seq
1191 aa
AA seq
DB search
MEYCRAVFLWICCSLLPGLHDGFNIHTKNHRIIKGPKQAQFGYTVQQHVAGGQKWLLVGA
PYETNGHHQTGDVYKCPLGKRSNGSCSKLNLGRISLTNVAERKDKMRLGMTLTTNPKDNS
FVVCGPLWSYECGSSYYSTGICSRVNASFKFSKTIAPAFQRCETYMDIVIVLDGSNSIYP
WTEVQAFLINILQKFYIGPGQIQVGVVQYGEKVVHEFHLNDYKSVEEVVKRASNIHQRGG
EETNTALGINVARSEAFKRGARRGAKKVMIVITDGESHDSPDLQQAIEDSEKDGITRYAI
AVLGYYNRRGINPEAFLNEIKYIASDPDDKHFFKVTDESALKDIVDALGDRIFSLEGTSK
NGTAFGLQMSQAGFSSHFVEDGILVGAPGAYDWNGAVLKETRQGKVVPPKSSYSQEFPEE
LKNHGAYLGYTVTSVVSARNGRLYVAGAPRFNHTGKVIIFTLKNTGNLTILHSLKGQQIG
SYYGSEISPVDIDGDGVTDNLLVAAPMFFSGGWEKGKVYIYRVTELNRFVLEGALEIQDH
GQNARFGSSLAPVPDLNGDGFNDVVVGAPLEDDHRGAIYVFFSQRNRILRKYKQRIAALD
IASGLRYFGRSIHGSMDMNEDGLVDLAVGSLGAAVLLWSRSVVRIHANIRFEPSKINVFV
KDCERGGKDVTCMSAIVCLNVTARTAIPPTQEVAITYNTTIGERRFNPRAIMDDPDKLLF
QNLTLLSGEETCQHIYFHVMETTDYVRPIVFTVAVALQDLDQGPALDDTWPTTFRTELPF
WNGCDEDDRCIPGLSLQSTTDLLSWRQFCGNAVHSRGAMCRRLSEGGPEGSERVMEGSRR
RMVVDVRLENRGENAXGARLNITYTPNLRFSSLIVKDNSDMKIECRSEDRQRHEKTCNVS
APFMRAKTQVSFRLEFEFSRSVFLDHVRVILEASSDGEEVTLEDNFNDIFHPLKYEADLL
FTRDSNPSGCEIKADLSLEIPGNIGPPFNFTFQIQNLGFFPVTDLQLNIEIPEMTKNGNQ
LLQISDFHIDKTDGTRCIPPQHVAQSRASPEDLSRVSRLNQSNTLPLPVQCTVNLNPYKE
VSVRIRGALRLDALHALRFKVLELVTSATVELPPSSPMFLHEERPVRHIILEIRKEGDYR
ISIWIIIGSTLGGLLLLSLLSLALWKLGFFQRQKRREEDEQETNGKVAEER
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
atggagtactgccgcgctgtgtttctctggatctgctgcagcctgttaccagggctccat
gatggtttcaacatccacaccaagaaccacaggatcatcaagggccccaagcaggcccag
tttggatacactgtgcagcagcacgttgccgggggacaaaagtggttattggtgggagct
ccatatgaaaccaatggtcaccaccagacaggggatgtgtacaaatgcccattggggaaa
cggtccaatggcagctgctccaaactcaacctaggaaggatttctctgactaatgtcgcc
gagcgaaaagacaagatgaggctggggatgacgctgacaaccaaccccaaagacaacagc
tttgtggtctgtggacccctgtggtcctatgagtgtggcagctcatactacagcactggg
atatgttctcgagtcaacgccagcttcaaattctccaaaaccatagctccagccttccag
aggtgtgagacctacatggatatagtgatcgttctggatggttccaactccatctacccc
tggacggaggtgcaagcctttcttatcaacattctacagaagttctacattggaccaggc
cagatacaggttggagtggtgcagtatggggagaaggtggtgcacgagttccatctgaat
gactacaagtcggtggaggaggtggtgaagagagcaagcaacatccatcagagaggtgga
gaggaaaccaacacggcactcggcatcaacgtcgctcgctcagaagcattcaaacgagga
gcccgacgaggcgccaagaaggtgatgatcgtgatcactgacggggagtcacatgacagc
cctgaccttcaacaggccatcgaggacagcgagaaggatggcatcacccgctatgccatc
gctgtgcttggctactacaaccggcgtggaatcaacccagaggcattcttgaatgaaatc
aagtatatcgctagtgaccccgatgacaaacacttcttcaaggtgactgatgagtctgcc
ttgaaggacattgtggacgcgcttggggataggatcttcagtttggaagggaccagtaag
aacgggacagcctttggcctccagatgtctcaggctggcttctcttcacacttcgtggag
gatgggatcctggtgggggcaccgggggcctacgactggaatggagccgtcctgaaggag
acccggcaggggaaggtggttccacccaagtcctcctactcacaggaattcccagaggag
ctgaagaaccacggcgcctacctaggttacacagtaacatcggtggtgtcggccaggaac
ggtcggctgtacgtggcaggggcaccgcggttcaaccatactggcaaggtcatcatcttc
accctgaagaacactggtaacctcaccatcctgcactccctcaaaggacaacagatcggg
tcgtactatgggagtgagatctccccggtggatatagatggtgacggagtaacagacaac
ctactggtggcagctcccatgttcttcagtggaggctgggagaagggcaaggtgtacatc
tacagagtgactgagctgaatcgtttcgtcctggagggagcgttggagatccaggaccat
ggtcagaacgctcggttcggctcctcgctggccccggtccctgacctgaacggggacggc
ttcaacgacgtggtggtgggggctcctctggaggatgaccacagaggagctatctacgtc
ttcttcagccaacgcaacaggattctgaggaaatacaaacagaggatagctgcgttagac
atcgctagtggcctgcgctactttggccgtagtatccatggcagtatggacatgaatgag
gatggcctggtggacttggccgtgggatccctgggggcggccgtgcttctatggtctcgc
agtgtcgtccgaattcacgccaacatcaggtttgaacccagcaagatcaacgtctttgtg
aaggactgtgagaggggaggcaaggacgtgacctgcatgtcagccatagtgtgtctaaac
gtcaccgcccggacagccatacctcctacacaggaagtggctatcacttacaacaccacc
attggggagcgccgattcaaccccagagccataatggacgaccctgataaactgctgttt
caaaacctgaccctgctttctggagaggagacctgtcaacacatctacttccatgtcatg
gagaccacggactacgtgaggcccatcgtgttcactgtggcagtggcactgcaggatctc
gaccagggccctgcgctggacgacacctggcccaccaccttcaggactgagcttcccttc
tggaatggctgtgatgaggacgaccgttgtataccaggcctgtccttacagagtacaact
gacctgctgtcttggaggcagttctgtgggaatgcagtccactccaggggtgcgatgtgt
cgacgtctgtccgaaggagggccggaggggtcagagcgagtgatggagggatcgaggcgg
aggatggtggtggacgttcgtctggagaacaggggagaaaacgccnacggagcccgcctc
aacatcacctacactcctaacctacgattctctagtctcatagtcaaggacaactcggat
atgaagatagagtgtcgcagtgaggacagacagaggcatgagaagacctgcaacgtcagt
gctcccttcatgagagccaagacgcaggtatctttccgcctggagtttgagttcagccga
tcagtgttcctggaccacgtacgtgtcattctagaagccagcagtgacggagaggaggtt
accttagaagacaatttcaacgacatctttcacccgctgaaatacgaggctgacctccta
tttacaagggactccaacccctctggctgtgaaatcaaagcagacctctccctggagata
ccaggaaatattggtcctccatttaacttcaccttccagattcagaacctgggcttcttt
cccgtgacggacctgcagttgaatatcgaaattccagagatgaccaaaaacgggaaccag
ctgttgcagatatcggacttccatattgacaaaacagacggtacccgctgcataccccct
caacatgtggcacagagcagggcgtccccagaagacctctctcgagtctcacgcctgaac
cagtccaatactctgcctctgccggtccaatgcactgtcaacctgaacccctacaaggaa
gtcagcgtcagaatcaggggggcactgcggttggacgccttgcatgctctgaggttcaaa
gtcctggaactggtgacaagtgcaacagtagaacttccaccttcaagccccatgtttctt
catgaagaaaggcctgtcagacatataatcctggagattaggaaagaaggggattacaga
atctcaatctggattatcattgggagcacgctgggagggttgttactgctgtccctgctc
agcctagctctatggaagcttggcttcttccagaggcagaagaggagagaagaggatgag
caggagaccaatggaaaggtggcagaggagcggtaa
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integrated database retrieval system
