Oncorhynchus gorbuscha (pink salmon): 124035524
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Entry
124035524 CDS
T07892
Name
(RefSeq) LOW QUALITY PROTEIN: TP53-binding protein 1-like
KO
K20915
tumor suppressor p53-binding protein 1
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
124035524
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
53-BP1_Tudor
BRCT_3
BRCT_2
Tudor_5
RTT107_BRCT_5
DUF4537
BRCT
Tudor_2
Motif
Other DBs
NCBI-GeneID:
124035524
NCBI-ProteinID:
XP_046204939
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All DBs
Position
LG05:complement(11647596..11680337)
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AA seq
1924 aa
AA seq
DB search
MDPSGSDLDSSLPHAENPCLIVEDSQPDSAALEDDPDSSYRALLARRLSSLQPATSHSPV
LELMSSPAGNRYSETDSQSERVQNNNHNGPVNQEESQVLEVCSNTRRCATEDMATESGAD
STTQCAQPEGGVFKLDFLELSESQGPGDVVGNSQEEEGPTAAQTDSQRHNQPGEQKNTTR
GLPSGSQDRKSKRSEVSSSSSSEPLGRAGRELSVQALLHSQGLQASEDQDPKGDDSELLS
SQEDLFDTDKTGTGVDSTMSEAENQGVPTLTPAHTLRLLHLSGQGTLVQESLSQNSEFVA
PTQENLSQTPFIVPNSPTGQENELGADEPMDTSMPPEAQSDGKEEEPMDMDPAPKSHPSA
STPVSQNSPGFVLERTLSLPTQPEFSHDVFVPTQSQEAGSSSIAPQETHSRKVTSSSQPT
ALDSSSPKMAAAPAQSKAPTTTDREHSVTDSFQLELSVNTQSCSLAQQASMQAGGKDVEE
DSQATQIEEGLDGRLRIDTIDSVISRNSQKRESNGVPSDSKTPAILPKVPQVPDLLKTSG
ESTRREECNTSQKSDTHKQTTLNVRNMNIGDDGINVTKTESSQKQDAKASSPSPSSQQKL
ETIDLFTPSSCVQETPSSSNSAACSLASLSQSQSQSVFPQMSHVGSVKALSPSPGVCVDS
RRDGGGRRDIGEAGGGGSPTSSQKNRDPSKSIQSLSQERGGTATNSPKEKNKADEEGMEE
GGEKQHDSTLGPEGSGLYLSLSQSQVLSPEPMEEEEEEKIGKFSVSHSRSEGGVGEEESC
SSIIVLEESEKGSQLLEKEVKSPSNMGTSQPVASRRGSVSSNGTGSQLKDTQLVPIGLTQ
ADKEGSREAEGLRDKSLSDSSGEIPFHFTLPKEGELIGPRVSATXPLISQLKQTPRHSTP
IDMTSFSEKSAAVGDVSTETAMATSEITAGESGEDTADGADGKLSLRMKLVTPVEEGSSE
HFSLQKPPRSDEEGSVSKVTTVVKAVTSPLPSPSVFSRVREAHRQVMEDQAEAHPSDPGT
PVRGELFSSPSQQKSSQRPSIPSLSLECISLPNSQSEPLSSPRQEVKHTLPLGLREKEPP
AEPSTPGRPAVKTPQKGTAAGDREPCGPPEPSTPTRAAAIRQRAVSQQTSFDNISPSSPS
KLCQRVAFQQTSFEAAGPRSPAASDEPETPPSRAAAGPAHRRHVRTIQEVRTTVTRIITD
VYYEDGREVDCKVTEESEEPVVDSHVLESDISPCRTGSSMTSGDLGDVSSLSSKASSLQH
SSGGTSIVTGPAQRGPEFIMPPSRGAKSASPRRGSGPQQRGHRGQTAGSEFIRERVQGLH
GSRAFTPLTPRGRARRGRPPSRSPLSRGAGVPRANARGQPLSSSEDEPYTRLCPTPHIPD
SPVVPSHSSTSLLTTISQDESSPAGSSFVGLRVVAKWSSNGYFYSGRITKDLGERRYRLL
FDDSYECEVTGKDILLCDPIPLDTEVTALLEDEYFSTGRVKGYKKEGEDLFYSVEKQGQT
TAVEREGQTTAVEREGQTTAVEREGQTTAVEREGQTTAVEREGQTTATVEREGQTTATVE
RQWYSRSSVILTMEQGNRLREQYGLGPYEPSTPLAKASDISLDNLVEGKRRRRGITGGAS
PLTPGPSGKRKLISSEDRDRTPAKRGRRGGARAGQRVGVCNTSGSGTDLPWDHSDLAETH
GPLPQSASLFLGFAFMLTASSESDRQTNQTISDGEEEYVQTAPYHKRYTETQLEAGAGFI
LNDFNEEQCKAAYQSLLITDQHSRTRKYLLCVASGVPCVSHIWVRDCCKEGKLLNYRNYL
LPAGVGPDERIVEWHPRCSPFKALRVLLVFEEPAELWSELLMMSGASSVRQHQAEKDSSD
IPVGKFDVVVTDRTCPPLVLKSVTSQEVPMVSPEWLIHSLICGERLGYHSNPQYHHDYTS
PPSS
NT seq
5775 nt
NT seq
+upstream
nt +downstream
nt
atggatcctagcggaagtgacctggattcgagtctgccccatgcagagaacccgtgcctg
atcgtggaggactcccagcccgacagtgcggcactggaggacgacccggacagtagctac
cgcgccttgctcgcccgccgcttgtccagcctgcagcctgccacctcccatagccctgta
ctggagctgatgtcctctccggcaggaaaccgatactccgagacagacagccaatcagag
agggtccagaacaacaatcacaacgggccagtcaaccaggaggaaagtcaagtcctagaa
gtttgctccaatacaaggaggtgtgctacagaagacatggccacggagtctggggcggac
tccactacacaatgcgcccagcctgaagggggagtgttcaagttagattttctggagctt
tctgagagccagggtccaggtgacgtggtggggaacagtcaggaggaggagggccctact
gctgcccagacagacagccagagacacaaccagccaggtgaacagaagaacacaaccagg
ggcttgccttcaggcagtcaggacagaaaatccaagaggtcggaggtgagctctagcagc
tcgtcggagcccctgggtcgtgccggccgggaactgagtgtccaggctttgctccactcc
cagggcctgcaggcctccgaggaccaggatcccaaaggggacgactctgagctgctgtcc
tctcaggaggacctcttcgacactgacaagacaggcacaggggtggacagcacaatgtca
gaggcagagaaccaaggagtgcccaccctgacccctgcccacaccctgcgtctgctgcac
ctctctgggcagggcaccctggtgcaggagagcctctcccaaaactctgagtttgtagca
cccacccaggaaaacttgagccaaacacctttcatcgtccccaattcaccgacaggacaa
gaaaatgaactgggtgccgacgaaccaatggacacgtctatgcctccggaggcccaatcg
gatggtaaggaggaggagccaatggacatggacccagctcctaagtcacacccctcggca
tccaccccagtatcccagaactccccaggttttgtgttggagaggaccctctctctgcct
acccagcctgagttctctcatgatgtatttgtcccaacccagagccaagaggctggaagc
agtagcatagctccacaagagacgcacagcaggaaagtgacatcatcatcccaacccaca
gcactggattcaagctcacccaagatggccgctgcacccgcccagtccaaagcacccaca
acaactgaccgagaacactctgtgactgattctttccaactggagctgtctgtgaatact
cagagctgtagtctggcccagcaggcttccatgcaggctggggggaaggatgtcgaggag
gacagtcaggctacacagatagaagaaggtctggacggacgcctacggatagacaccatt
gactctgtgatttcacgtaacagccagaagagggaaagtaacggggtcccctctgactca
aaaacacctgccattttgcctaaagttcctcaggtgcctgacttactgaagactagtggg
gaaagtaccaggagagaggaatgtaacacttcacagaagtctgacacgcacaaacagaca
accttgaatgtacgcaacatgaatataggcgacgatggtatcaatgtgacgaaaacagag
agttctcagaagcaggatgccaaggcctcttccccctctccttcctcccaacagaagctt
gaaaccatagacttattcacccctagcagctgtgtgcaggagacaccttcttcctcgaat
agcgctgcctgtagtttagcctccctgtctcagtctcaatcccagtctgttttcccacag
atgtctcacgtgggatcagtgaaggctctctctccgagtccaggtgtttgtgtagactcc
agaagagatggaggaggaaggagagacataggagaagcaggaggagggggaagcccgacg
agctcacagaaaaacagggacccgtctaaatccatacagtctttatcgcaggagcgtgga
ggcactgctaccaacagcccaaaggagaaaaacaaagcagatgaagaagggatggaggag
gggggagagaagcagcacgatagcacgttggggcccgagggctcaggcctctatctgtct
ctctctcagagccaggtgctttctccagagcccatggaggaagaagaggaggaaaaaata
gggaagttctctgtctcgcactccaggagcgagggaggagtaggagaggaggagagctgc
agcagcatcattgtgctggaggagagtgagaagggctcccagctactggagaaggaagtg
aagtcgccgtctaacatgggcacgtctcagccagtggcaagccggcgggggtcagtgtcg
tccaatggcacagggtcacagctaaaggacacccagctggtaccaatcggactcacccag
gctgataaggaagggtctagggaagcagaggggctcagagacaagagcctcagtgacagc
tctggagagattccattccacttcactctccccaaagaaggcgagctgattggccctcgt
gtgagtgccactncccctctgatcagccagttgaagcagacaccaagacacagcactccg
attgacatgacttccttctctgagaagtccgcggcggtgggtgatgtttccacggagacg
gcgatggcgaccagtgaaatcacggcaggggagagtggcgaggacacggccgacggggct
gatgggaaactgagtttgcggatgaagctggtgacccctgtggaggagggcagctcagaa
cacttcagcctgcagaagccaccgcgatcagacgaggaaggctctgtctccaaggttacc
accgttgtcaaggctgtaaccagccccctgcccagcccctctgtgttcagcagggtgagg
gaggcccacagacaggtgatggaggaccaggccgaggcccatcccagtgaccctggaacc
cctgtcagaggggaactgttcagctcaccctcacagcagaaaagctcccaaagaccctcc
atcccctctctctccttggaatgcatcagcctccccaacagccaatccgagcccctctcc
agcccccgccaggaagtgaagcatacgttgccattggggctcagagagaaagagcctcct
gctgaaccatccaccccaggccgtccagcagtgaaaacaccacaaaaaggcaccgcagct
ggggatagagagccgtgtgggcccccggagccatccacccccaccagagccgctgccatc
agacagagggccgtgtcccagcagacaagctttgacaacatctctcccagttcacccagt
aagctttgtcagagagtggcgtttcagcagaccagttttgaagcggctggccccaggtct
ccagcagccagcgacgagccagagaccccaccctcgagggcagctgctggtcccgcccat
cgcagacacgtgcggaccattcaggaagtgcggactacggtcacacgcatcatcacagac
gtgtactatgaggacgggagagaggtggactgtaaggtcactgaggagtcggaggagccg
gtggtggacagccatgtgttggaaagcgacatctctccgtgtcgcaccggcagctccatg
acctctggtgacctgggtgatgtcagctctctgtcctccaaagcttccagcctgcagcac
agctccgggggcaccagcatagtcacgggtcctgcccagaggggccccgagtttatcatg
ccgcccagccgaggggccaagtctgccagccccaggagggggagtgggccacagcagagg
ggccacaggggtcaaacggcagggtcagagttcatcagagagagagttcaaggactccat
gggtcacgggccttcaccccattgacgccccgcggaagagccaggaggggcagacctccg
tcccgctcacccctgtccaggggtgccggggtccctcgtgccaatgcccgcggccaacca
ctgtcgtcctccgaggatgagccctacacccgcctgtgtcccaccccgcacatcccagac
agcccagtggtccccagccactcctccacgtctctcctcaccaccatttcccaagatgaa
agcagcccagctgggagcagcttcgtggggcttcgcgtggtggccaagtggtccagcaac
ggctacttctactcaggccgcatcaccaaggaccttggcgagaggcgttaccggctgctc
ttcgatgacagctatgagtgcgaggtcacaggcaaggacatcctgctgtgcgaccccatc
cccctggacactgaggtcacggcactgctggaggacgagtacttcagcacaggtcgagtg
aagggctacaagaaggagggcgaggacttgttctacagtgtggagaagcagggccagact
acagctgtagagagggagggccagactacagctgtagagagggagggccagactacagct
gtagagagggagggccagactacagctgtagagagggagggccagactacagctgtagag
agggagggccagactacagccactgtagagagggagggccagactacagccactgtagag
aggcagtggtacagccgcagttctgtcatcctgaccatggagcaaggcaacaggctgaga
gaacagtacggcctgggaccctacgagccctccacacccctggccaaggcctctgatatc
agcctggataacctggtggaggggaagaggagacgcagggggatcacagggggggccagc
cccctcacccctggcccctctgggaagaggaagctgatcagctctgaggacagggatagg
actccggctaagcgaggccgcagagggggagccagagccggtcagcgggttggtgtgtgt
aacacctcaggcagtggcaccgacctgccctgggaccatagtgacctggcggagactcac
ggcccgttgccccagagtgcatctctcttcctgggctttgccttcatgctgaccgcatca
tcagagagcgaccgccagaccaaccagacaatcagcgatggcgaggaggagtatgtgcag
acggccccctatcacaaacgttacactgagacccagctggaggccggagcaggcttcatc
ctcaacgacttcaatgaggaacagtgcaaggcggcctatcagagcctgctgatcaccgac
cagcatagccgaaccaggaagtacctgctgtgtgtggccagtggcgtgccatgtgtgtct
cacatctgggtgagggactgttgcaaggagggcaagctgctcaactacaggaactacctg
ctgcccgccggagtgggccctgacgagcgcatagtggaatggcatccgcgctgcagcccg
tttaaggccctgcgggtcctgttggtatttgaggagccggcggagctgtggtctgagctg
ctgatgatgagtggagcttcctctgtgagacagcatcaagcagaaaaggacagctctgac
attcctgtgggcaagtttgatgtggtggtcacagaccgcacctgtccgccattggttctg
aagagtgtgacatcacaggaagtacccatggtgtcgcccgagtggctaatccacagtctg
atctgtggggagcgcctgggttaccatagcaacccccaatatcatcatgactacacatcc
ccaccttcatcctaa
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integrated database retrieval system
