Oncorhynchus gorbuscha (pink salmon): 124035560
Help
Entry
124035560 CDS
T07892
Name
(RefSeq) TOX high mobility group box family member 3-like
KO
K28489
thymocyte selection-associated high mobility group box protein
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogo03000
]
124035560
Transcription factors [BR:
ogo03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG TOX
124035560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
YABBY
Motif
Other DBs
NCBI-GeneID:
124035560
NCBI-ProteinID:
XP_046204998
LinkDB
All DBs
Position
LG05:15608591..15675159
Genome browser
AA seq
620 aa
AA seq
DB search
MDVRFYPTAGGNPIPGDPPNLDFSHCLGYYNYNKFANNNNYMNMADVAGGGDTFHTPSLG
DEEFEIPPITPPPETESGLGLSDVDSPFPGHPLQHRGPFTPQFPPQSLELPSITISRNLM
DQEGLSSINGLPLNMQGQLRQYPPNPAMVMRSIISMNNPHGMMSRNQLTTINQSQLSAQL
GLNMTGPKIPHTSPSPPTSKSATPSPSSSINEDDQDQDNRVMAGEKRPAPDAGKKPKTPK
KKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDGLGEEQKQGYK
SKTEAAKKEYLKALAAYRASLVSKAAQESAEAQTIRSVQQTLASTSLSPGLMLPSPLSQH
PSMSSMSSMAQALQNGMPRAIAPKPLQMRLGGNQIVTSVTVQHQNMTNGVPSQLLNQMGG
GGGGAMVAGAQPTVSQMSPPMQGGVGGHMQQLQQQQTQQQQMQQHLQHHQMQQQQMHHQQ
IQQQMQHQHFQHHLQQQLQQHNIQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQRHDMQQ
QQLQLHQMQMQQIHQQQMQQHLQQQQQQHQSQCSPPQHSPSTPQSVGGSASMGSPQPAPQ
QPHPSQIQAHAQVLSQVSIY
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atggatgtacggttttatccgactgccggaggaaatcctattccaggagacccaccaaac
ctggatttttcccactgtttgggctactacaactataataagtttgccaacaacaacaac
tacatgaacatggcagatgtcgctggtggtggtgatacattccacacccccagcctggga
gacgaggagtttgagatccctcccatcacccctcctccagagactgagtctggcctgggc
ctatcggatgtggactcccccttcccggggcacccgctccagcacaggggacccttcaca
ccccagttcccccctcagagcctggagctgccctccatcaccatctcacgcaacctcatg
gaccaggaggggctctccagcatcaacggcctgccattgaacatgcagggccaactccgc
cagtacccccctaaccccgccatggtcatgagatccatcatcagcatgaacaacccccat
ggtatgatgtcccggaaccagctgaccaccatcaaccagtcccagctcagcgcccagctg
ggcctgaacatgacaggacccaaaatcccccatacttcgccctcaccaccaaccagcaag
tcggccacgccctcaccctccagctctatcaacgaggacgaccaagaccaggacaatagg
gtaatggcaggagaaaagcgcccagcgccagatgctgggaagaagcccaagacccccaag
aagaagaagaagaaggaccccaacgagccccagaagccagtttcagcctacgccctgttc
ttcagagacacacaggccgccattaagggtcaaaaccccaacgccaccttcggagaggtt
tccaagatagtggcctccatgtgggatggcttgggagaggaacagaagcagggctataaa
agcaaaacagaggctgctaaaaaggaatatttaaaagccctcgctgcctaccgcgccagc
ctggtttcaaaggctgcccaggaatcagcagaggctcagaccatccgttcagtccagcag
accctggcctccaccagcctgtccccaggtctgatgctgccttcgccactctcccagcac
ccgtccatgtcctctatgtcctccatggcccaggctctccagaacggcatgccacgggcc
atcgcccccaagccgctgcagatgaggctggggggcaaccagatcgtgacctcggtgacg
gtgcagcaccagaacatgaccaacggtgtgccatcccagctgctgaaccagatgggtgga
ggtggtggaggggccatggtggccggggcccagcccacagtgtcccagatgagcccgccc
atgcagggtggcgtgggggggcacatgcagcagctgcagcagcagcaaacacagcagcag
cagatgcagcaacatctgcagcaccaccagatgcagcagcagcagatgcaccaccagcag
atccagcagcagatgcagcatcagcatttccagcaccacctccagcagcagctgcagcaa
cacaacatacagcaacagcagcagcaacaacaacaacaacagcagcaacaacaacaacaa
caacaacagcagcagcagcagcagcagcagcagcagcagcagaggcatgatatgcagcaa
cagcaactgcaactccaccagatgcagatgcagcagattcaccagcagcagatgcagcag
catctccaacaacagcagcaacagcaccagtcccagtgttccccaccacaacactcaccc
agcacacctcaatctgtggggggctccgcctccatgggcagtccccaacccgccccccag
cagccacacccctcccagatccaggcccacgcccaggttctgtcccaggtctccatctac
tga
DBGET
integrated database retrieval system
