Oncorhynchus gorbuscha (pink salmon): 124035574
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Entry
124035574 CDS
T07892
Name
(RefSeq) Wilms tumor protein 1-interacting protein homolog isoform X1
KO
K16682
LIM domain-containing protein
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogo03019
]
124035574
03036 Chromosome and associated proteins [BR:
ogo03036
]
124035574
Messenger RNA biogenesis [BR:
ogo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
124035574
Chromosome and associated proteins [BR:
ogo03036
]
Eukaryotic type
Sister chromatid separation proteins
Aurora kinases
Regulators of Aurora kinases
124035574
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
zf_RING_Vps8
Motif
Other DBs
NCBI-GeneID:
124035574
NCBI-ProteinID:
XP_046205021
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All DBs
Position
LG05:16681987..16721361
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AA seq
717 aa
AA seq
DB search
MDHYEEDLGLRASKLMEDLSLYEAYKDGMYSSRRDMVINPDLDFSSPTIPEQKSTTMNGN
SVPQQQTHTVENYMTGNKVYTAAPVRPVNGNRAVPVDYCTPQRDTVYPNEDSYCTKSEIA
LPCYSGASERHRRYSLEVLGHRYSTGSAYDGVVLNKPVPSPGNRCNSICVTTNHDGRYNA
TSPRSSFVSSLSSQEQSKHASPRSSISSPRTSLVVPGQDKYTSPRSSLVHCEGSSALSPR
SSYASTASDTSKHSSPRASLNSYDCCSKPSSNRTSGISMGYDQRHISPRSSTASQYSCTT
SPRSSYSDSRYMPVENHDLEGAVLHDMPVASPRSSICSQDGCARPGTIANCVVSPRSSIS
SHSSRSSRSSRGSMSTYPDLPLPSPRSSMLGTGLQEDILTQDCGDTNGVHSRIHFQALSG
MPEAMPQHAPQQSTQAGMNTEVSAGSPSSSYGLHRKTPASGQRFKLPYQVTPCRESGPSQ
AERSLEALTLELEKELEMHMKKEYFGICIKCGKGVYGASQACQAMGNLYHTNCFTCCSCG
RRLRGKAFYNVNGKVYCEEDFLYSGFQQTAEKCFVCGHLIMEMILQALGKSYHPGCFRCV
VCTEGLDGVPFTVDVENNIYCVKDYHTVFAPKCASCNQPILPAQGSEETIRVVSMDKDYH
VECYHCEDCGLQLNDEEGHRCYPLDCHLLCHGCHIRRLKVPVPGHQPPSYPLHVTEL
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atggatcactatgaggaagatttgggactccgggcgagtaaattaatggaggacctttcc
ttatatgaagcatacaaggatggaatgtacagttcaaggagagacatggttatcaacccc
gatttggatttttcgtcaccaacgatacccgagcagaaaagtacgacaatgaatggcaac
tctgtgcctcagcaacagacacacaccgttgagaattacatgactgggaataaagtgtac
actgcggctcccgtgcgccccgtgaatggcaacagagccgttcctgtggattattgcacc
cctcaaagagacacagtttatcctaatgaagatagctattgcaccaaatccgaaattgct
ttgccgtgttatagcggcgcgtccgagcgacacaggaggtactccttggaggtgctgggg
cataggtacagcactggtagcgcgtacgatggagtggttttgaacaagccagtaccttca
cctggcaacagatgcaacagtatatgtgttaccaccaaccacgacggcagatacaatgca
accagcccgcggtccagtttcgtatcctccctctcctcccaggagcaaagcaaacatgca
agcccgaggtcgagcatcagtagcccgcgcacgagtctggtggtacccgggcaagacaag
tacactagtcccaggtccagtctggtacactgtgaagggagcagtgccctcagcccccgg
tctagctatgcaagtacagccagcgacacaagtaaacattccagcccaagggccagtctg
aacagctatgactgctgcagtaagcccagcagtaaccgcaccagcggcatcagtatgggc
tacgaccaaaggcacatcagccccaggtccagcacagcgagccagtattcttgtaccacc
agtccacgctctagctattcagattcgcgttacatgcctgtggagaaccatgatctggag
ggtgcagttttgcatgacatgccggtggccagtccccggtcaagcatctgcagccaggac
gggtgtgcaagacccgggacaatagcgaactgcgtcgttagtccccggtccagtatctcc
agtcacagttccagaagttcccggagctccaggggatctatgagcacctacccagatctc
ccactgccttcacccaggtcctcaatgttggggactggtttgcaggaggacatactaaca
caagattgtggcgataccaacggtgttcatagtcgtatccatttccaagcgctctctggg
atgccagaggccatgccacagcatgcaccacaacagtcaacccaggcagggatgaacaca
gaggtgtccgctggatcaccatcttcttcttacgggctccataggaaaactccagcctca
gggcagaggtttaaactaccttaccaggtgaccccatgccgggaaagtggcccaagccaa
gcagaaaggagtctggaagcactcaccttggagctggagaaggagttagaaatgcacatg
aaaaaagaatactttggtatctgtatcaagtgtgggaaaggtgtgtatggagccagccaa
gcctgtcaggccatggggaatctgtaccataccaactgcttcacctgttgctcctgtggg
aggaggctgagagggaaagctttctacaacgtcaacggcaaggtctactgtgaagaggac
ttcctgtactctggctttcagcagacggcagagaagtgctttgtatgtggtcacctcatc
atggaaatgatcctgcaggcactgggcaagtcctaccaccctggctgcttccgctgtgtg
gtctgcacagagggtctggatggagtacctttcactgtggacgtggagaacaacatctac
tgtgttaaagactaccacacggtctttgccccaaaatgtgcatcatgcaaccagcccatc
ctccctgctcagggctctgaggagaccatccgggtggtgtccatggacaaggactaccat
gtggagtgctatcactgtgaggactgtggcctccagctaaacgacgaggagggtcaccgc
tgttaccccctggattgccacctgctctgtcacggctgccacatccgcaggctcaaggtc
ccagtgcccggccaccagccacccagctacccactacacgtcactgagctgtga
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