Oncorhynchus gorbuscha (pink salmon): 124035748
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Entry
124035748 CDS
T07892
Name
(RefSeq) lysine--tRNA ligase-like isoform X1
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
124035748
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ogo01007
]
124035748
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ogo03016
]
124035748
Enzymes [BR:
ogo01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
124035748
Amino acid related enzymes [BR:
ogo01007
]
Aminoacyl-tRNA synthetase
Class II (A)
124035748
Transfer RNA biogenesis [BR:
ogo03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
124035748
Prokaryotic type
Other AARSs
124035748
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-GeneID:
124035748
NCBI-ProteinID:
XP_046205341
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Position
LG05:complement(26218183..26229513)
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AA seq
610 aa
AA seq
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MLTLVVRTARHQVCQAFGVRAQGVKFALPSTVSVPALIQGNRWRGDKSELKRRMKAEKKA
SEKEAKVKEQVEQKQTNDQAVQNAYGEDEETLDPNQYFKIRTQAIQALKGTAEDPYPHKY
NVDLSLTGFIEKYNHLQPGDQLTDIVLNVSGRVHAKRESGAKLIFYDLRGEGVKLQVMAT
NRSYKSEEEFVRINNKLRRGDIIGVRGNPGKTKKGELSIIPIEMTLLSPCLHMLPHLHFG
LKDKETRFRQRYLDLILNDYVRQKFVTRAKIITYLRSFLDGLGFLEIETPMMNLIPGGAV
AKPFVTYHNDLDMNLYMRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNPEFTTCE
FYMAYADYHDLMDITEKLLSGMVKHITGEYKVKYHPEGPEGPTYEIDFTPPFRRVSMTHD
LEKEMGVKFPAADTYDSDETRKFFDELCAQKGVECPPPRTTARLLDKLVGDFLEVTCINP
TFICDHPQIMSPLAKWHRSEKGLTERFELFVLKKEICNAYTELNDPIRQRELFEQQAKAK
AEGDDESMSIDETFCTALEYGLPPTAGWGMGLDRLTMFLTDSNNIKEVLFFPAMKPDDNK
TAPLTEGTSV
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgctgactctggtggtcaggactgccaggcaccaggtgtgtcaagcctttggggtcagg
gctcagggggtaaagttcgctctccccagcacagtgtcagtcccagctctaattcagggg
aatcgctggcgaggtgataaaagtgagctgaagaggcgaatgaaagctgagaagaaggca
tctgagaaggaagccaaagtcaaagagcaggttgagcagaagcagaccaatgaccaggca
gttcagaatgcatacggggaagatgaggagaccctggaccctaaccaatactttaagatc
cgcactcaagccatccaggctctgaagggcacagcagaggacccataccctcacaagtac
aatgtagatctgtcgctcacagggttcattgagaaatacaaccacctacagcctggagac
cagctaacagacattgtcctcaatgtatcaggtcgtgttcatgccaagagagagtccggg
gccaagttaatcttctatgacttgcgaggggaaggcgtcaagctgcaagttatggcaacc
aacaggagctacaagtctgaggaggagtttgtgcgcatcaacaacaagctgcggcgtggt
gacatcatcggtgttcgtggtaatccagggaagaccaaaaagggcgaactgagcatcatt
cccatagagatgaccctgctttcaccttgcttgcacatgctgccccacctgcactttggt
ctcaaggacaaggaaacacgatttcgccagcgatacctggatctgattctcaatgactat
gtgaggcagaagtttgtaacacgtgccaagatcatcacttacctccgcagcttcctggat
gggctgggattcctggagattgagacgcccatgatgaacctgattcctggtggggccgtg
gccaaaccctttgtgacctaccataacgacctagacatgaacctttacatgaggatcgct
cctgagctctaccacaagatgcttgtggttggggggattgacagagtgtatgagattgga
cggcagttcagaaacgaaggcattgacctcacccacaatccagagttcaccacctgcgaa
ttctatatggcctatgcagattaccatgacttgatggatatcacagagaagcttctctcg
gggatggtcaagcacatcactggagagtacaaagtgaagtatcatccagagggtccagag
ggcccgacctatgagatcgacttcactcctcccttcaggagggtcagcatgacgcacgac
ctggagaaggagatgggcgtcaagttcccagctgctgacacctacgacagtgacgagaca
cgtaaattctttgatgagctgtgtgcccagaaaggagtagagtgccctcctcctagaacc
actgcccgcctccttgacaagttggtgggagatttcctggaagtcacgtgtatcaacccc
acgttcatctgtgaccacccacagatcatgagccccctggccaaatggcaccggtcagag
aaaggcctgacggagcgttttgagctgtttgtattgaagaaggagatttgtaatgcctac
actgagttgaacgaccctatcagacagagggagctctttgagcaacaggctaaggccaag
gcagagggtgatgacgagagcatgtccattgatgagactttctgcacggcactagagtat
ggcctgccaccaactgctggctggggcatgggccttgaccgtcttaccatgttcctcaca
gactctaacaacatcaaggaggtgctgttcttcccggccatgaagcctgatgacaacaag
acagcccctctcacagagggcacctctgtgtag
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