Oncorhynchus gorbuscha (pink salmon): 124035818
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Entry
124035818 CDS
T07892
Name
(RefSeq) B-cadherin-like
KO
K05689
cadherin 1, type 1, E-cadherin
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04371
Apelin signaling pathway
ogo04514
Cell adhesion molecules
ogo04520
Adherens junction
ogo05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
124035818
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
124035818
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
124035818
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
124035818
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ogo03036
]
124035818
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ogo04515
]
124035818
04090 CD molecules [BR:
ogo04090
]
124035818
Chromosome and associated proteins [BR:
ogo03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
124035818
Cell adhesion molecules [BR:
ogo04515
]
Cadherins
Major cadherins
124035818
CD molecules [BR:
ogo04090
]
Proteins
124035818
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
Cadherin_4
Big_13
DUF1366
Motif
Other DBs
NCBI-GeneID:
124035818
NCBI-ProteinID:
XP_046205543
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All DBs
Position
LG05:complement(30473285..30487751)
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AA seq
880 aa
AA seq
DB search
MGAFWFVELGVLTLFLQAFNPGSSESKCLPGFNSEMYIFKVERNHLQSGRRLGKVVFDDC
TSRTSFLFHSEDSRFKVDGDGTLKLKRGVTLHNGHKEFYVSTQSKGKKITVPVRVLHEAR
HGHHHHHEMTTQPQPGSSLSLPVLNFPNSSGGLKRRKRDWVIPPINFPENGRGPFPKHMV
QIRSNSDKEVKILYSITGPGADQPPVGLFTVDKNSGFLYVTQPLDREKKDTYVLLAHAVA
VGAGTAEEPMDIIVKVIDMNDNKPVFTQDPFTGTVPEASKPGDEVMQVTATDADEEGSAN
SDVRYTILSQEPPLPSPNMFVINPVTGMIRVNAAGLDRENILKYTLEIQAADLEGSGLTS
FGKAIITVTDSNDNAPQFVTPSYTVSVPENKVDALVVKMPVTDGDDPHSSAWATTFKIVD
GDPQGLFNVSTGPSKLEGIITTAKPLDFEKNNKYTLLVTVQNEVPFAVPLPTSTATVIVN
VEDVNEAPVFSPVEKMIKKSEDLPIDSDLVLYTATDPDTARNQKVTYKIRNDLAGWLSIN
KDTGLIKVKSLMDRESTFVQDNKYSVVVLGTDNDEIPATGTGTLIIELEDVNDNPPTIDE
RMIKVCNKESSPQLLSVTDKDGAGFAAPYTVQLQGSSLSNWTARMNDTKTGIILTLKTML
DSGDYTVVLRVSDIQGLHQESTIQASVCDCKGADVQCTDKAVAGFGLSSILGILGAILLL
LLLSLLLLMFLRKRGGEKKEPLLQEDDVRDNIYYYDEEGGGEDDQDFDLSVLHRGLDNRP
DVFRNDIAPTMARPEYRPRPANPADIGNFIDDNLKAADNDPTAPPYDSLLVFDYEGGGSE
AGSLSSLNSSSSGDDQDYDLLQQWGPRFKKLSDMYGGGED
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgggggccttttggttcgtggagttgggggtattaacattgtttctccaggctttcaat
ccagggtcgtcggagtcaaaatgtctgccgggtttcaattcagaaatgtacattttcaaa
gttgaaagaaatcacttacaaagtggccggagactaggaaaagtggtttttgatgactgc
accagtcgcaccagctttctctttcactccgaggattcacgcttcaaagtagatggcgac
gggacgctgaaactgaagaggggggtgactctgcataatggacataaggagttctatgtc
tctacccagtccaagggcaagaagatcacggttccagtcagagtgctgcatgaggccaga
cacggccaccaccatcaccatgagatgaccacccagccccagcccggatcaagtctgtct
ctacctgttctgaacttccccaattcttcaggaggtctgaaaagaaggaagagggactgg
gtcattcctcccatcaacttcccagagaatggcagaggccccttcccaaaacatatggtg
cagatcaggtccaacagtgataaagaggtgaagatcctgtacagcatcactggtcctggg
gctgaccaacctcctgtgggactcttcactgtggacaaaaactcggggtttctctatgtg
acccagcctttggacagggagaaaaaagacacatacgttctcctagcccatgctgttgca
gtgggtgcaggtacggctgaggaacccatggatatcattgtgaaagtcatcgatatgaat
gacaacaaacctgtatttacccaagatccatttacgggaacagttcctgaagcatcaaaa
ccaggcgacgaggtcatgcaggtaacggccactgatgctgatgaggagggctctgccaat
tctgatgtcagatacaccattctcagtcaggagcctccactaccaagccccaacatgttt
gtcatcaaccctgtgaccggaatgattcgggttaacgcagctgggttggacagagaaaat
attcttaaatatactttggaaatccaagctgccgatttggagggctctggccttaccagc
tttggcaaagccatcattacagtaacggacagcaatgacaatgcgccacagtttgtgact
ccttcgtacaccgtgtcagtcccagagaataaagtggatgccttggtggtgaaaatgcca
gtgactgatggggatgatcctcactcctctgcctgggccaccaccttcaagatagttgac
ggggaccctcaaggccttttcaatgtgagcacaggccctagcaagctggaaggcatcatc
acgacagcaaagccgcttgactttgagaagaacaacaagtacactctgctggtcactgtg
cagaatgaagtcccatttgccgtccccctgcccacctccactgctactgttatagtgaat
gtggaggatgtgaatgaagctccagtcttcagtccagtggagaagatgatcaaaaaatct
gaggacctccctattgacagtgacctggttctgtacaccgccacagacccagacactgca
aggaatcagaaagtcacatacaagatacgcaatgatcttgctggatggctcagtatcaac
aaagacactgggctaatcaaagtcaagagcctcatggacagagaatccacttttgtccaa
gacaacaaatactctgttgttgttctgggcactgacaacgatgaaatcccagcaactggc
actggcacccttatcatagagctggaggatgtgaatgacaaccctccaaccattgacgag
aggatgattaaggtctgcaacaaggagtcctccccacagctgctgtcagtcactgataaa
gacggagcgggcttcgctgctccttacaccgtacagcttcaggggtcgtccctttcgaac
tggactgccagaatgaatgacacaaaaacgggcattatcctgacactgaagactatgttg
gacagtggcgattacacggttgtcctgagagtgtctgacatccagggcctgcaccaggag
agcaccatccaggcctctgtgtgtgactgcaaaggagctgatgtccagtgcaccgataaa
gctgtggcaggcttcggcctctctagcattctgggaattctaggagccattttactactc
ctattgttgtctcttctgctgctcatgttcctgaggaagagaggtggtgagaagaaggag
cctctgctacaggaggacgatgtcagggacaacatctactactatgacgaggagggaggt
ggcgaggatgaccaggatttcgacttgagtgttctgcacagaggtctggataaccgtcct
gatgttttccgtaatgacatcgctccaaccatggcccggccagagtatcgcccacgaccc
gccaacccagccgacattggcaacttcattgatgataacctgaaggcagctgacaacgac
cccactgctcctccctacgactccctcctggtgtttgactatgaaggaggtggctctgag
gccggctccctcagctccctcaactcctccagctcaggagacgaccaggactacgacctc
cttcaacagtggggcccgcgcttcaagaagctgtctgacatgtacggaggaggagaggat
tga
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