KEGG   Oncorhynchus gorbuscha (pink salmon): 124035910
Entry
124035910         CDS       T07892                                 
Name
(RefSeq) DNA damage-binding protein 1
  KO
K10610  DNA damage-binding protein 1
Organism
ogo  Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03420  Nucleotide excision repair
ogo04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ogo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    124035910
  09124 Replication and repair
   03420 Nucleotide excision repair
    124035910
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ogo04121]
    124035910
   03400 DNA repair and recombination proteins [BR:ogo03400]
    124035910
Ubiquitin system [BR:ogo04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Adoptor protein
     124035910
DNA repair and recombination proteins [BR:ogo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      124035910
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      124035910
SSDB
Motif
Pfam: Beta-prop_RSE1_2nd CPSF_A Beta-prop_RSE1_1st Beta-prop_RIG_2nd
Other DBs
NCBI-GeneID: 124035910
NCBI-ProteinID: XP_046205751
LinkDB
Position
LG05:36863640..36891618
AA seq 1139 aa
MSYNYVVTAQKPTAVNACITGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGK
IAVMELFRPKGESKDLLFILTAKYNACILEYKQNGESIDIITRAHGNVQDRIGRPSETGI
IGIVDPECRMIGLRLYDGLFKVIPLDRENRELKAFNIRLEELQVIDVHFLYGCQAPTVCF
IYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIPVPEPFGGAIIIGQESITYH
NGDKYLAIAPPTIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEELMDGAVVLKDL
RVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNDSGSYVAVMETFTNLGPIV
DMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSEAGRE
TDDMLVLSFVGQTRVLMLNGEEVEETELPGFVDNLQTFYCGNVAHQQLIQITSGGVRLVM
QDSKALVSEWKEPQGRNISLAACNSSQVVLAVGRALYYLQILSGELKQISTVEMEHEVAC
LDITPLGEGGESPLCAVGLWTDISARVLKLPCFTALHKEMLGGEMIPRSILMTTFEASYY
LLCALGDGALFYFGLDLTTGVLSERKKVTLGTQPTVLRTFRSLSTSNVFACSDRPTVIYS
SNHKLVFSNVNLKEVNYMCPLNSEGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESP
RRICYQEVSQCFGVLSSRVEMQDASGTTAAVRPSASTQALSSSVSSSKLFPSSTSPHETS
FGEEVEVHSLLVVDQHTFEVLHAHQFLQSEYALSMVSCRLGRDLSVYFIVGTAMVYPEEA
EPKQGRIIVFHYTDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTAEKELRT
ECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILD
DDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGVFHLGEFVNVFSHGSLVLQNLGESS
TPTQGSVLFGTVNGMIGLVTSLSEGWYSLLLDLQNRLNKVIKSVGKIEHSFWRSFHTERK
TEQATGFIDGDLIESFLDLGRAKMQEVISTLQIDDGSGMKREATVDEVIKIVEELTRIH
NT seq 3420 nt   +upstreamnt  +downstreamnt
atgtcgtataattacgtggtaacagcgcagaaaccgacggcagtcaatgcctgcatcacc
ggccacttcacctctgcggaggacctgaatctgctcatagctaaaaacacacgcctggag
atctatgtggtcacagcggaagggctccggcctgtcaaagaggtgggcatgtacggcaag
atcgccgtcatggagctcttcaggccaaagggcgaaagcaaggacctgctgttcattctc
actgccaaatacaacgcctgcatcctggagtacaaacagaacggggagagcatcgacatc
atcacccgcgcccacggcaacgtgcaggaccgcatcgggcgtccctcggagacgggcatc
atcggcattgtcgaccctgaatgccgcatgatcggcctgcggctgtacgacggcctattc
aaggtgatcccgttggaccgggagaaccgagaactcaaggccttcaacatccgcctggag
gagctgcaggtcatcgacgtccacttcctgtacggctgtcaggcgcccacagtctgcttc
atctatcaggaccctcaaggacggcatgtaaagacctacgaggtgtcgctgagggagaag
gagttcaacaaggggccatggaaacaggagaacgtggaggcggaggcttctatggttatc
ccagtcccagaaccatttgggggggctataatcattggacaagaatccatcacctaccac
aacggggataaatacttggccatcgcacctcccaccatcaagcaaagcaccattgtctgt
cacaaccgtgtggaccccaacggctcgcgctacctgctgggggacatggagggccgcctg
tttatgctgctgctggagaaggaggagctgatggacggggccgtggtgctcaaggacctc
cgcgtcgagctgcttggagagacgtccattgcagagtgcttgacctacctggacaacggt
gtggtgtttgtgggttccagactgggtgactcccagttggtcaagctcaatgtggacagt
aacgactccgggtcgtacgtggcggtgatggagaccttcacaaacctggggcccatcgtg
gacatgtgtgtggtggacctggagagacagggacagggccagctggtcacctgctctgga
gcgttcaaggagggctccctcaggatcatccggaatggtatcgggatccacgagcacgcc
agcattgacctgccagggatcaaaggtttgtggccccttcgctcagaggctgggagggag
acagacgacatgctggtcctgtctttcgtcggccagacaagggtactgatgctaaacggg
gaggaggtggaggagactgagctgcctggctttgtggacaacctgcagaccttctactgt
ggcaacgtggcccaccagcaactcatccagatcacgtcaggcggtgtgcgtctggtaatg
caggacagcaaggccctggtgtctgagtggaaggagccgcagggtcggaacatcagcttg
gccgcatgtaactcctcccaggtggtgctggccgtgggccgcgccctctactatctccag
atcctctctggggaactcaaacagatcagcacggtggagatggagcatgaggtggcctgc
ctagacatcacgcccctgggggagggcggagagtcgcccctctgcgccgtgggcctgtgg
acggacatatcggcccgggtcctcaagctgccctgcttcaccgccctgcacaaggagatg
ctcggaggagaaatgatccctcgctccatcctgatgacgacgttcgaggccagctactac
ctgctgtgtgccctgggagacggagcgctcttctacttcggcctggacctgacgacaggc
gtgctgagcgagcggaagaaggtgactctgggcactcagcccacggtgctgaggaccttc
cgctccctgtccacatccaacgtgtttgcctgctccgaccggcccaccgtcatctactcc
tccaaccacaagctggtcttctccaatgtcaacctcaaggaggtcaactacatgtgtccg
ctcaactccgagggctaccccgacagtctggcgctggccaacaacagcactctcaccatc
gggaccatcgacgagatccagaagctccacattcgcacggttcccctctacgagtctccc
aggaggatctgttaccaggaagtgtctcagtgtttcggggtgctgtccagccgcgtggag
atgcaggacgccagcgggaccacggcagcggtgcgccccagcgctagcactcaggctctg
tctagcagtgtgagctccagtaagctgttccccagcagcacctccccacacgagacctcc
ttcggggaggaggtggaggtgcacagcctcctggtggtcgaccaacacaccttcgaagtg
ctccacgcccaccagttcctccagagtgagtacgccctcagcatggtgtcctgccgcctg
ggcagggacctctcggtctactttatcgttggcacagcaatggtctacccagaggaggcg
gagcccaagcaaggccgcatcatcgtcttccactacactgacggtaagctgcagacggtt
gcagagaaggaggtgaagggagccgtctactccatggtggagttcaatggcaaactgctg
gccagcatcaacagcacagtgcgtctgtacgagtggaccgctgagaaggagctgaggacg
gagtgtaaccactacaacaacatcatggcactctacctaaagaccaaaggtgacttcatc
ctggtgggagacctgatgaggtctgtgctgctgctggcctataaacccatggagggcaac
tttgaggagattgcccgtgacttcaatcccaactggatgagtgctgtggagatcctggac
gatgacaacttcctgggggcggagaatgccttcaacctctttgtgtgtcaaaaagacagc
gcggccacgacagacgaggagcgacaacatctgcaggaggtgggcgtgttccacctgggg
gagtttgtcaacgtcttctcccatgggtcactggtgctgcagaacctgggcgagagctcc
acccccacgcagggctccgtgctcttcggcaccgtcaacggcatgatcggtcttgtgacc
tctctgtccgagggctggtacagcctgctgctggacctgcagaaccgactcaacaaggtc
atcaagagcgtgggcaagatcgagcacagcttctggaggtccttccatacggagcgtaag
actgagcaggccacgggcttcatcgacggggacctcatcgagagcttcctggacctgggc
cgcgccaagatgcaagaggtgatcagcacgctacagattgacgacggcagcggaatgaag
cgcgaggccaccgtggacgaggtcataaagattgtggaggagctgacaaggatccactag

DBGET integrated database retrieval system