Oncorhynchus gorbuscha (pink salmon): 124035954
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Entry
124035954 CDS
T07892
Symbol
pcare1
Name
(RefSeq) photoreceptor cilium actin regulator
KO
K24165
photoreceptor cilium actin regulator
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ogo03037
]
124035954 (pcare1)
04812 Cytoskeleton proteins [BR:
ogo04812
]
124035954 (pcare1)
Cilium and associated proteins [BR:
ogo03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
124035954 (pcare1)
Cytoskeleton proteins [BR:
ogo04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
124035954 (pcare1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Retinal
PCDH15_12th
Motif
Other DBs
NCBI-GeneID:
124035954
NCBI-ProteinID:
XP_046205893
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Position
LG05:44579102..44586151
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AA seq
1156 aa
AA seq
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MGCSPSKGNNFVAHGTFGRGRTLQPGGKESIVESQSDCGGNGGSSGTGDTWERRDGERRL
AGQTQSVQKEAPSTPQKRRPSLTELVPEGVILDKKVGTQETDKTGQHGKEKQGDKQDMAD
KKGGRKPKKNCKGVKSAKKKEKENKAPLVEQKVDFPEPLVKAHQAAYAFLNPSISKYEIL
LGLLDQATQTQMSVQPMVTFMAMRYEEINRGLEEMADEGERILKDNGEHLAWPSPMKNLS
SSPPLKSGSINAEPPPDLLQQLLQYTTQRMQNVGQSVGGIGDSALEEAAEYFTSVSELLE
DKLKAKHAAESRLMQLLTRIEAASLRKPGPEDSGLFSEDSGIGAESESLAGSERRLRCES
CESTGSNRTTPYSPFGITASPVQQGAPRQKFIKKVSHSNSLNSIDSVCTIMDKGSASLDD
GEEQGDDDEGEEEGQGGRTRSNASLSGPNQQPCRLVPKCIENPQNVEMTLKMKDAISGRI
RFVPSQRDSAKTKPTDSPKTRCQWTEGGSPKRPQRAASVRREIKKTTVPKEHRSQSAESV
RSKGQDPTLIELERTQKDLSQMLERMSKGRTEGNTKAGLTKQNPGDSATSPASNRLCPTL
QRNNNILPIQDISGLMKHDSGEHRAGKDIEEKNKDKKSTKGPLKATPPPSPTLGPLKATP
PPSPPLSHRPCSGLFRGRNSVKRLIDSFSQGVEEPKQEASKVLGPLKGVRKCGVHVMPGV
GDTEAIMNSGVSSCRTYDLDLESLPPPPLEVLMDNSFECAQSLTVSDVDDGIASRGRSPV
PKRATASQKMRASMRSVSVLPSRGNLPQGSSSMFPARTVRRDISASSRVSHDEPQLEVDL
ETEEAATLYKQARKIIHLRHSSESPIEKGHAVPKRSSPNRAASGGRQGDNSPSETVPPTS
TISSQPPATPPVSRIRMLPSTPSTPSGLHRRLPSPTTFRKQPTPPSTNSPPAIRKLPTPP
PLQRRLPSPPASRKVLTPNSSSSDSTHSFKAPSPPTSPRVQRWKRENSSKDSSPGASAIP
QLISNARSVFCPASSSLFEAQPCPVPCPPQAWASISGSVVPLSLGNRGRLPTSVRGPKPF
IRRSHSDRRPSLSLPSRAPIVSFAETCGSEPAISIHGLEDEPSREDESWDSKSDFRENAH
SASHPDLCIVGQGLTL
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atgggatgctccccatctaaaggtaacaattttgtggctcatggcacctttgggaggggc
aggacactacaaccagggggcaaagagagcatagtggagtcccagtctgattgtggaggg
aatggaggctcctctggaacaggagacacttgggagaggagagatggggaaaggagactg
gctgggcagacccaatctgttcagaaggaagcaccttcaaccccacagaaaaggagaccc
tccctgactgagttggttccagagggggtcatcctggataaaaaagtggggactcaagag
acagataagacagggcaacatggaaaagagaaacaaggagacaagcaagatatggctgac
aaaaagggtggtcgaaagccaaagaaaaattgtaaaggagtcaagtcagctaaaaagaaa
gagaaggagaataaagctccccttgtggagcagaaagttgactttccggaacctttagtg
aaagcccaccaggctgcttatgcctttttaaacccaagtatcagcaaatatgagattcta
ctggggctactggaccaagcaacccagacccagatgtctgtgcagccaatggtgaccttc
atggctatgcgctacgaggaaatcaaccgagggctggaggaaatggcagacgagggtgaa
aggattctgaaggacaatggggagcatctcgcctggccaagcccaatgaaaaacctatcc
agttctccccctctcaaatctggttccatcaatgctgagcctccaccagatctcttgcag
cagctacttcagtataccactcaaaggatgcaaaatgtgggccagtctgtgggtggcatt
ggggactctgccttggaggaggcagctgagtactttacctctgtctctgagctgctggag
gataaattaaaagccaagcatgcagcggagtcaagactgatgcagttgctgactcgtatt
gaggctgcctcacttcgtaagcccggaccagaggactctggattgttcagtgaggacagc
ggaattggggctgaaagcgagtcactagctgggtctgaaagacgactccgttgtgaaagc
tgtgagtccactgggtccaaccgaaccactccttacagtccttttggcattactgctagc
ccagtccagcaaggggcaccaaggcaaaagtttattaagaaagtgagccacagcaactcc
ctaaactccatagactcagtgtgcaccataatggataaaggatctgcctccttagacgat
ggtgaggagcagggtgatgatgatgagggggaagaagagggacaaggtggcaggacgcga
tctaacgcctcactatctggtcctaaccagcaaccttgtcgcctggtacccaagtgtata
gaaaaccctcaaaatgtggaaatgaccctgaaaatgaaagatgccataagtggtcggatt
cgatttgttccctcacaacgtgacagtgccaaaactaaaccaacagacagccccaagacc
aggtgccagtggacagaggggggatcaccaaaaaggccccaacgagcagcctctgtacgg
agggaaattaaaaagaccactgttcctaaagagcaccgttcacagtctgcagaatccgtt
cgcagcaaaggtcaagatccaacactgattgaactagagaggacacagaaggatcttagt
cagatgctagagaggatgagcaaaggcaggacggaggggaataccaaggcaggtctcact
aaacagaacccaggagattctgcgacgtccccagcatccaatcgtctgtgccccaccctg
cagaggaacaacaacattcttccaatccaggacatttcagggcttatgaagcatgactct
ggggaacacagggcaggcaaggacattgaggagaaaaataaagacaagaaaagcaccaag
ggaccgttgaaagccaccccaccacctagccctacattggggccattgaaagccacccca
cctcctagccctccattgtcacatcgtccatgctcaggactgtttcggggaaggaattct
gtcaaaagactgattgactccttcagccagggggtggaagagcccaaacaagaggcatcc
aaagtgttggggcctcttaaaggggttcgaaagtgtggtgttcacgttatgcctggagta
ggtgacactgaagccataatgaacagtggggtcagcagttgtaggacatatgatttggac
cttgaaagtctgccaccccctcctcttgaggtcttgatggacaattcctttgaatgtgca
cagagcctcacagttagcgatgtagatgatgggattgcaagtagaggtcgatcccctgtt
cccaagagggctacagcatctcagaagatgcgtgcctccatgcgttctgtgtcagtccta
cccagcagaggcaacctgccccaggggtctagcagcatgtttcctgcccggactgtaagg
cgggatatctctgctagttccagagttagccacgatgagcctcagctggaggtagacctt
gagacagaggaggcggccactctctacaagcaagctagaaaaatcatccatttgcggcac
tcctcagagtctcctattgagaaaggtcatgctgtgcccaaaaggtcctctcccaatcga
gcagcatcaggagggagacagggagataacagtccttctgagacagtgcctcccacttca
accatcagtagccaaccacctgccaccccgcctgtatctagaatccgaatgctgccttcc
acgccttcaaccccaagtggcttgcatcgaagattacccagtcccaccaccttcagaaag
cagcctacgcccccatccaccaacagccctccggccattcgcaaacttcccaccccacca
ccgcttcagagaagacttccaagcccacctgcctcaagaaaagtactgaccccaaactcc
agctcttctgactccacacattctttcaaggcaccctcaccaccaacgtccccaagggta
caaagatggaaacgggagaacagcagcaaggactccagcccaggtgcttcagctatccct
cagttgatcagtaacgctcgctctgttttctgcccggcctcgtcctcactgtttgaggcc
cagccttgcccagtaccctgccccccccaggcttgggcctcaatcagtggtagtgttgtc
ccgctttccttgggaaatcgtggtaggctgcctacgtctgtgcgagggcccaagcctttc
atccgacgcagccactcggacaggaggcccagtctaagcctgccgtccagggcacccatc
gtctcatttgcagagacttgtgggagtgagccggccatcagcatacacgggctggaggac
gagccaagcagagaagacgagtcgtgggacagcaaatcagatttcagagagaatgcccac
tctgcttcgcacccggacctgtgcattgtgggtcagggccttacattatga
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