Oncorhynchus gorbuscha (pink salmon): 124035978
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Entry
124035978 CDS
T07892
Name
(RefSeq) LOW QUALITY PROTEIN: glutamate receptor ionotropic, delta-2-like
KO
K05207
glutamate receptor delta-2 subunit
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
124035978
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ogo04040
]
124035978
Ion channels [BR:
ogo04040
]
Ligand-gated channels
Glutamate (ionotropic)
124035978
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
DUF6724
Motif
Other DBs
NCBI-GeneID:
124035978
NCBI-ProteinID:
XP_046205953
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All DBs
Position
LG05:46653802..47330508
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AA seq
1010 aa
AA seq
DB search
MKVVSAVLFLAIFWSQEWEPVNSDSIIHIGAIFDESARKDDEVFRMAVADLNLNYEILET
EKITISVEFVDGNNPFQAVQEACELMNRGILALVSSIGCMSAGSLQSLADAMHIPHLFIQ
RATAGTPRSSCPLITTRTRQDDYTLFVRPPVYLNDVILQVVSEYSWQKFIIFYDQEYDIR
GIQDFLDKTSQQGMDVSLQKVESNINMMITSMFRTMRVEELHRYRDTLRRAVLFMSPATA
KAFITEVVETNLVAFDCHWIIINEEISDQDVQELVMKSIGRLTLIRQIFPLPQNTSQRCV
KHNHRINTSLCDPKDPKAQTLEITNRYIYDTVLLLANTFHRKLEDRKWHSMASLTCIRKN
SKPWQGGRPMLDNVKKSGVSGLTGFLEFTDNGTNPNIYFEILGTNYGEDRGRGVIKLATW
DPVHGLNGTLTDRKLENNMRGVVLRVVTVLEEPFVMVSENVLGKPKKYQGYSIDVLDALS
NYLGFKYEIYVAPDHKYGSQQADGVWNGLIGELVAKRADMGLSALTITPERESVVDFTTR
YMDYSVGVLLRKAERTVDMFACLAPFDLSLWACIAGTVLLVGILVYLLNWLNPPRLPMGS
VSSTTLYNSMWFVYGSFVQQGGEVPYTTLATRMMMGVWWLFALIVLSSYTANLAAFLTIS
RIENSIQSLQDLSKQTELPYGTVLDSAVYEQVRSKAMNPFERDPMYSQMWRMINRTGGVD
NNVEESKEGIRKVKYGHFAFVWDVAVLEYVGINDEDCSFYTVGNKAPDRGYGIALQHGSP
YRDIFSQRILELQQNGDMDILKLKWWPRDSPCDLYSAVHTKHRGSALDIHSFAGVFCVLA
AGVVLSCLIAMVETWWTRRKGSRVPSKEDDKEIDLEHLHRRVNSLCTEDDSPHKQFSTSS
IDLTPLDMDSMPANRQALEQISDFRNTHITTTTFIPEQIQTLSRSLSAKAQQGFAFGPVQ
DHRTGGPFRQRAPNGGFFRSPIKTMSSIPYQPTPQPNFGYGNDPDRGTSI
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttgtttcagcagtgttgttccttgccatattttggagtcaggagtgggagccc
gtgaattctgattcaatcatacacatcggggccatctttgacgagtctgccaggaaggat
gacgaggtgttccgcatggccgtggcggacctcaacctcaactacgagatcctggagacg
gagaagatcaccatctccgtggagtttgtggatgggaacaaccctttccaggcagtccag
gaagcctgtgagttgatgaacagggggatcctggcgctggtcagctctatcggctgtatg
tcggcgggctcccttcagtctctggcggacgcgatgcacatcccgcacctcttcatccag
cgtgccactgccgggacccctcgctccagctgccccctcatcaccacccgcacccgccag
gatgactataccctcttcgtgcgcccaccagtctacctcaatgacgtcatcctccaagtg
gtcagcgagtacagctggcagaagttcatcatcttctacgaccaggaatacgatatccgt
gggatccaggacttcctggacaagacgtctcagcaaggcatggacgtgtcgcttcagaag
gtagagtccaacatcaacatgatgattaccagcatgttccggaccatgagggtggaggag
ctccaccgctaccgggacacgctgcgccgggccgtgctcttcatgagccccgccactgcc
aaagccttcatcactgaggttgtggagacgaacctcgtggcattcgactgccactggatc
atcatcaatgaggagatctcagaccaggacgtccaggagctggttatgaagtctatcggg
cgtctgactctgatcaggcagatcttccccctgccccagaacaccagccagcgatgtgtc
aagcacaaccaccgcatcaacacctccctctgtgaccccaaagaccccaaggctcagaca
ctggagataaccaaccgctacatctacgacacggtgctgctattggccaacaccttccac
aggaaactggaggacaggaagtggcacagcatggccagcctcacctgcatccgcaagaac
tccaagccctggcaaggcgggcgccccatgctagacaacgtcaaaaagtctggagtgagt
ggtctgaccggcttcctggagtttaccgacaacggaaccaaccccaacatctactttgag
atcctggggaccaattatggcgaggacagggggaggggtgtcatcaagctggccacctgg
gatccagtgcatggcctcaatggaacactaactgacaggaagttggagaacaacatgaga
ggtgtggttctgcgcgtggtcactgtgctggaggagccctttgtgatggtgtcagagaat
gtccttgggaagccaaagaagtaccaaggctattccatcgacgtgctggatgctctctcc
aactacctgggcttcaagtacgagatctacgtggcccctgaccataagtatgggagccaa
caggctgacggggtctggaacggactaatcggagagttggttgccaagcgtgctgacatg
ggtctctcggctctcaccatcacaccagagcgggagagtgtggtggactttaccacgcgc
tacatggactactcggtgggcgtgctgctcaggaaggctgaacgcaccgtggacatgttc
gcctgcctggcgccctttgacctgtcactatgggcatgcatcgcgggcacggtgctactg
gtgggcatactggtctacctgctcaattggctcaacccgccgcgcctgcccatgggctcc
gtctcctccaccaccctctacaactccatgtggtttgtctacggatcatttgtccagcag
ggtggtgaggtaccgtataccaccctggccacgaggatgatgatgggggtatggtggctc
tttgctttgatcgtcctctcctcctacacggccaacctggctgccttcctcaccatcagc
cgtatcgagaactccatccagtctctccaggacctgtccaagcagacagagttgccctac
gggacggtgttggactcggctgtatacgagcaggtgcgcagtaaggccatgaaccccttt
gaaagggaccccatgtactcccagatgtggcgtatgatcaaccgcaccggaggggtcgac
aacaacgtggaggagtccaaggagggcatccgcaaggtgaagtacggccattttgccttt
gtgtgggatgtggcagtgctggagtatgttggcatcaacgatgaggactgctccttctac
actgtggggaacaaggcaccagaccggggatacggcattgccctgcagcacggcagtcca
tacagggacatcttctcccagaggatcctggagctgcagcagaacggggacatggacatc
ctgaagcttaagtggtggccccgggacagcccgtgtgacctgtactctgcggtgcacacc
aaacaccgcggcagcgccctggacatccacagcttcgccggcgtgttctgcgtgctggca
gcgggtgtggtgctctcctgtctcatcgccatggtggagacctggtggactaggaggaag
ggctcacgagtcccctccaaagaggatgataaggagatcgacctggagcaccttcaccgc
cgggttaacagcctgtgcacagaggacgacagcccccacaaacagttctccacctcctcc
attgacctgacgccactggacatggactctatgccggccaaccggcaggctctggagcag
atcagcgacttccgaaacacgcacatcaccaccaccaccttcatccccgagcagatccag
accctcagccgcagcctgtctgccaaggcccaacagggcttcgccttcggtcccgtgcag
gaccaccggactggggggcccttcaggcagagagcccccaacggaggcttcttccgcagc
cccatcaagactatgtcctccataccctaccagcccactccccagcccaacttcggctac
ggcaacgacccagaccggggcacgtccatatga
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