Oncorhynchus gorbuscha (pink salmon): 124036027
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Entry
124036027 CDS
T07892
Symbol
snapc4
Name
(RefSeq) snRNA-activating protein complex subunit 4 isoform X1
KO
K09453
snRNA-activating protein complex subunit 4
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogo03000
]
124036027 (snapc4)
03021 Transcription machinery [BR:
ogo03021
]
124036027 (snapc4)
Transcription factors [BR:
ogo03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
124036027 (snapc4)
Transcription machinery [BR:
ogo03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
snRNA-activating protein complex (SNAPc)
124036027 (snapc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
HTH_Hrp3
SLIDE
Motif
Other DBs
NCBI-GeneID:
124036027
NCBI-ProteinID:
XP_046206049
LinkDB
All DBs
Position
LG05:complement(52905132..52925012)
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AA seq
1418 aa
AA seq
DB search
MSSDDLLAQREKVERQILVLERSLGPESNSIELSSDSCSSDDGSDDNASQPEDLGPPGDL
EAEREQIQREIEELECTLGPNASNAEILSDEDVQGSETESSKEDSAEELDLPQNTDTCLQ
MNLVYQEVLKEKLEELERLLSDNQHQQKEIMTQLSATGTPQATTSGQPTLKLFLGSFLKP
YFRDKVTCLGPPANPEAREKMSKRIGPTDDVKMKRWEGWQKTLLINAVMKDSTKRMIQPK
LSKVEYLTQKMVSSENVEKQILRKQITEIEKDIEAISALKEDELMGGRYDDHDWQKISNI
DFEGIREAEHIKSFWQNYLHPSINKASWKENEIEMLKKVALKHGHHNWDLIADKLGTNRT
AFMCLQTYQRYICTDFRRRRWGSVEDEILRELVEKMRIGNYIPYTQISYFMEGRDSCQLM
YRWTQVLDPTLKKGYWSKEEDEMLLSAVAKHGAGNWWKIRQDVPGRNDGQCRDRYVDVLV
GNVKKGPFDEMEKAQLRQLVEKYGRKWSKIAAEIPNRIDCQVLQQWRRMTGYKPRERDKS
KRALQRRRKIAAVRSIKSKLMRRDDDEHSSSDEEENVEIEFMDSDDEKQQKFIEPHWSDQ
ESDIIKDYTQPDMEQWIPVLEKEFEGLGKVRSMMVERPSKNTTQEQATTDSQDAARKVIV
VRSTILDRFGKPAATVIGQNPPILAKKDYNSDLAMLKVCYGEVKNLIAWKKTNARKHVSR
QKNSGPISGDQGTAHKSSRQKESSANSETCVTLNYSLQLAVTPWVGNVLMPPPPSSNKRR
EADMVRERAESIGLTNSPVFLFFLQVLRLDAEGCKQIIKMRNNQAVHLENKSWEAKQASL
KTQTQRHGPRTVASMLNQKGNEQQKRKQNSQLVMMIPQTFVIAPPVVQSIPHPAVPSTPT
SRQQLMPSALTQLRPSTPSRPILSTHGQPVLSTPSLPIPSTPGQLIPSTPNRPILPAPLS
IQSSTTIDRVNEEANKNHSGKKRNRKPTEKAQALKDAAIAKKSVEESPKRKKARTKESLV
VQPSNVVMSPPQTAWVLTPIGLVPIRGIGIQMTPQNLPRNALAPACPSPIIINQQVPLTL
NAAATQASPNMTCVFPSPSTPKDPSALMLSPASSVAQGTASPSVNSLSTSITITSNTALR
MTNPVKRMRITNPVMQAVATTCPQLNAVSPVPMNTVISAPIRPQTGPPQALVLNVPPGSL
PASFPQGALRIVQLNHPKSVPPPRNPELMQFDPNLMFMEDPAQVREWLSGKRGVALPDLG
VTLPYLPPFVSSLNTLSGLLKCKKTLAVRAMQLLPPEEKENQEEQQQVAAVRSFVAERFS
HNPGYLLLKARFLSCFTMPALLATINPVKLSKSPTPDHGDVEEEPFRNRPVEQTDTGYEQ
PTTLQAPLLSTDGKGPPATSFSGITTRNKSRYLNTATE
NT seq
4257 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcggatgaccttcttgcacagagggagaaagtcgaacgccagattttggtgctc
gagcgcagccttggtcccgaaagcaactccattgaactatcttcagacagttgttcatct
gatgatggatcagacgataatgcatctcaaccagaagatttgggtcctccaggggacctg
gaggcagagcgggagcaaatacagagagagattgaagagttggagtgcactcttggccca
aatgcatctaatgctgagattctgtcagatgaggatgtccaaggaagtgaaacagaatcg
agcaaagaggacagtgctgaggagctggatctaccccagaacacagatacatgtctgcaa
atgaaccttgtttaccaggaagtgttgaaagagaaattagaggagctggagcgactgtta
tcagacaatcaacaccaacaaaaagagattatgactcagctgtctgccacaggtactccc
caggctaccacatctggacaacccacactgaagcttttcttggggagctttctgaagccc
tatttcagagataaagtcacatgtctgggcccacctgctaatccagaagccagagagaag
atgagtaaaaggatcggacctactgacgacgtcaagatgaaaagatgggaaggctggcag
aagactctgctgataaatgctgtcatgaaagacagcacgaaacgcatgatacagcccaag
ctgtccaaggtggaataccttacacagaaaatggtcagctctgaaaatgtggaaaagcaa
atcctgcggaaacaaatcactgaaattgaaaaggacattgaggccatcagtgcactgaag
gaggatgagctgatgggtggccgctatgatgaccatgattggcaaaagatttccaatatt
gattttgaaggcatccgtgaagctgaacacataaaaagcttttggcagaactacctgcat
ccctccattaacaaagccagttggaaggaaaacgaaattgagatgctgaagaaagtcgct
ctaaaacatgggcaccacaactgggatctgattgctgataaacttgggaccaacaggaca
gccttcatgtgtctccagacgtaccagcgctacatctgtaccgacttcaggaggaggagg
tggggcagcgtggaggacgagatccttcgagagctggtggagaagatgcgtatcgggaac
tacatcccgtacacccagatctcctatttcatggagggccgggattcatgccagctgatg
tatcggtggactcaggttctggaccccaccctcaaaaaaggctattggtctaaagaagaa
gatgagatgctgctgagcgcagtggctaaacacggggcggggaactggtggaagatccgt
caggacgtgcctggcagaaatgatggccagtgtcgggacaggtacgtggacgtcctggtt
gggaatgtgaagaaggggccctttgacgagatggaaaaggcacagctcagacaattggtg
gagaaatatggacgtaaatggtctaagatagctgccgagattcccaacagaattgactgc
caggtccttcaacagtggaggagaatgaccgggtacaagcccagagagagggacaaaagt
aaaagagcattgcagcgaaggagaaagatcgcggctgtgaggagcatcaagagtaagctg
atgaggcgagacgatgatgagcactcaagctccgacgaggaggagaacgtcgagattgag
tttatggacagtgacgacgagaagcaacagaagttcattgaaccgcactggtctgatcag
gaaagtgacattatcaaagactacacccaaccagacatggagcaatggatccccgtgcta
gagaaggagtttgaagggctggggaaggtgaggagcatgatggttgaaaggcccagcaag
aacacaacgcaagagcaggcaacgacggacagccaggatgcggcacgcaaggtcatagtg
gtacgttccactatcctggaccgcttcggcaagcctgctgccactgtcatcggacaaaac
cccccaatcctagcaaagaaggattacaacagtgacctggccatgctgaaggtgtgctac
ggagaggtgaaaaacctgatcgcttggaagaaaaccaatgccagaaaacatgtaagtcgc
cagaaaaacagtggacctatcagcggtgaccaggggacagcccacaagtcctcaagacaa
aaggagtcctctgccaacagtgaaacctgcgtcactctcaactattcccttcagttggca
gtcactccctgggtgggcaatgtgcttatgcccccaccaccctcttcaaacaagcgccgt
gaagcggacatggtgcgagagagagcagagagcattggactcaccaatagcccagtgttc
ttgttctttctgcaggtcctccgtttagatgcagaaggctgtaagcagatcattaaaatg
cgtaacaaccaagctgtacacctggaaaacaaatcttgggaagcgaaacaggcttcattg
aaaacccaaacgcaacgccatggtcccagaacagtggccagtatgctaaaccagaaggga
aacgagcagcagaagaggaagcagaacagtcaacttgtgatgatgatccctcagaccttt
gtcattgcaccgcctgtagtacagtccatcccacatcctgcggtcccctccactccaact
tccagacaacaactcatgccttccgcacttacccaactcagaccctctacccccagccga
cctatactctccacacatggtcaacctgtactctctacccccagcctacccataccctcc
acacctggtcaacttataccctcgacccccaaccgacctatactccctgctcccctttcc
atccaatcctcaactacaatagaccgggtgaatgaggaggctaataagaatcattcaggg
aaaaaacgcaatcgtaaacctactgagaaagcacaggccctcaaggatgctgcgattgct
aaaaagtcagtggaagagtcacccaaacgcaagaaagcccgtaccaaagagagtctagtt
gtccagccttctaacgtggttatgtcccctccacaaactgcttgggtcctgacacccatt
ggacttgtgccaattaggggcattggcatccagatgacacctcagaatctaccacgaaat
gctcttgcacctgcttgtccatctcctattattatcaaccagcaagtccctctaacacta
aatgctgctgcaacacaagcctctcccaatatgacctgtgtcttcccatctccctctacc
cctaaagacccatctgccctcatgctatctcctgcctcatctgtagcacagggaactgcc
tccccatctgtaaactctctctccacctccattaccatcacaagcaacactgctctaaga
atgaccaacccagtaaaacgcatgagaataactaacccagtcatgcaggctgtggcaacc
acttgtcctcagctcaatgccgtttcacctgttcccatgaacacggtcatctcggctccc
atcagaccgcagactggccctccacaggctttagtcctcaacgtccctccaggctccctt
ccagcctcattcccacagggagccctccgaatcgtgcagcttaaccaccctaaaagtgtc
cctccaccccgcaatccggagctaatgcagtttgatcccaacctgatgttcatggaggac
ccggcacaagtgagagagtggttgagcggcaagcgaggcgttgcgcttccggatttgggc
gtcactctgccctacttacccccttttgtcagcagtcttaataccctatcaggtctcctg
aaatgtaaaaagacattggcagttcgtgcaatgcagctcctacccccagaggagaaagag
aaccaggaagaacagcaacaggtagctgcagtgcggagctttgtggcagagcgcttcagc
cataacccaggctacctgctcctgaaggctcgcttcttgtcctgtttcaccatgcctgct
cttttggctactatcaatccggtgaaactctccaagtcccccaccccggaccacggtgat
gtggaggaggaacctttcaggaaccgtccagtggaacagacggataccgggtatgaacag
ccaacaacactccaggcccctctgctaagcacagacggaaaaggacctcctgccacctcc
ttctctggaatcaccacaagaaataaaagtcgctacctcaacacggccacagagtaa
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integrated database retrieval system
