Oncorhynchus gorbuscha (pink salmon): 124036154
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Entry
124036154 CDS
T07892
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear receptor subfamily 6 group A member 1-A-like
KO
K08561
germ cell nuclear factor
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogo03000
]
124036154
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ogo03310
]
124036154
Transcription factors [BR:
ogo03000
]
Eukaryotic type
Zinc finger
Cys4 germ cell nuclear factor
124036154
Nuclear receptors [BR:
ogo03310
]
6. Germ cell nuclear factor
6A. Germ cell nuclear factor receptor
124036154
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
124036154
NCBI-ProteinID:
XP_046206307
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Position
LG05:complement(58406283..58434552)
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AA seq
458 aa
AA seq
DB search
MDTWEDVAADPRVCLICGDRATGLHYGIISCEGCKGFFKRSICNKRVYRCSRDKNCEMSR
KQRNRCQYCRLLKCLQMGMNRKAIREDGMPGGRNKSIGPVQITDEEIERIMSGQEFKEEA
SLPEHTWSNNGDSSDHSSPSNGASEGNQPSPASTLSSNRSVEMNGGYTAALRDQYMNTPM
NTPYQLLPHLFSYHAQSGLLAPQPRSLYPQSHXLVLQLVAAEDLAPLTTPMLIEDGYKVT
QVELFALLCRLADELLFRQISWIKKLPFFCELSIEDYTCLLSSTWQELILLSCLTIYSAQ
IFGDLADVTAKYTPSEDEMQGFSENGMEVMERLIYLFRKFHQLKVSNEEYACMKAINFLN
QDIRGLTNVSQLEQLNKRYWYVCQDYTEYKYPHQPKRFPEIMMCLPEIRFMAGKLVNVPL
EQLPLLFKAVLHSCKSSLISYRTGSSPCLTSTGTSPGN
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggatacatgggaagatgttgcagctgacccacgtgtttgcctcatctgtggagaccgc
gccacaggcctgcactatggcatcatctcctgcgagggctgcaagggcttcttcaagcgc
agcatctgcaacaagcgcgtgtaccgctgcagccgcgacaagaactgtgagatgtcgcgc
aagcagcgcaaccgctgccaatactgccgcctgctcaagtgtctacagatgggaatgaac
cgcaaagcaatcagggaagatggcatgccaggagggagaaacaaaagcattgggcctgta
cagatcacagatgaggagattgagcggatcatgtcaggacaggagtttaaggaggaagcc
agtctcccggagcacacctggagcaacaatggtgacagtagtgaccacagttccccgagc
aacggcgcctccgagggcaaccagccatcacccgcatccactctgtcatccaatcgctct
gtagagatgaatggcggctacacggcggctctcagggaccagtacatgaacacccccatg
aacaccccctaccagcttctacctcacctcttcagctaccatgcccagtcaggcctgctg
gccccacagccccgcagcctctacccccagtcacacnccctggtgctgcagctagtggct
gcagaggacctggccccactgaccacccccatgctgatagaggatgggtacaaggtgact
caggtggagttgtttgcgctgctgtgtcgtctggctgacgagctgctgtttcgtcagatc
tcgtggatcaagaaactgccgttcttctgcgagctgtccatcgaggactacacctgtctg
ctcagctccacctggcaggagctcatcctgctctcctgcctcaccatctacagtgcgcag
atctttggagacctggccgacgtcaccgccaagtacacgccctctgaggacgagatgcag
gggttcagtgagaatggcatggaggtgatggagaggctgatctatctgttccgcaagttc
caccagttgaaggtcagcaacgaggagtacgcctgcatgaaagccatcaacttcttgaac
caagatatccgtggtctgaccaacgtctcccagttggagcagctaaacaagcgctactgg
tacgtgtgtcaggactacactgagtacaagtaccctcaccagcccaaacgcttccccgag
atcatgatgtgtctgccagagatccgtttcatggcaggcaagctggtgaatgttcccctg
gaacagctcccccttttgttcaaagcagtcttgcactcctgcaaatccagcctaatcagc
tacaggacaggaagttccccctgtctgacttctacgggtacctcccctgggaactaa
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