Oncorhynchus gorbuscha (pink salmon): 124036245
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Entry
124036245 CDS
T07892
Symbol
adamts13
Name
(RefSeq) A disintegrin and metalloproteinase with thrombospondin motifs 13
KO
K08627
a disintegrin and metalloproteinase with thrombospondin motifs 13 [EC:
3.4.24.87
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ogo01002
]
124036245 (adamts13)
Enzymes [BR:
ogo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.87 ADAMTS13 endopeptidase
124036245 (adamts13)
Peptidases and inhibitors [BR:
ogo01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
124036245 (adamts13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
ADAMTS_CR_3
ADAMTS_spacer1
TSP_1
ADAMTS_CR_2
Reprolysin
Reprolysin_3
Adt-1
Reprolysin_5
Reprolysin_4
TSP1_spondin
TSP1_CCN
Reprolysin_2
Peptidase_M10
DUF6055
Motif
Other DBs
NCBI-GeneID:
124036245
NCBI-ProteinID:
XP_046206510
LinkDB
All DBs
Position
LG05:complement(61692065..61705905)
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AA seq
1555 aa
AA seq
DB search
MAALALLCLLSVLPGSTAILMRSPLEELFLHSLDQKDMVFYFGTDSATSVPEFQLIWTDC
ASTELHTGPWRCSFETEGKRFVLGLGERKQSFSCQSTLETARNTTLNTTRKSHAMCCQQA
RVLHPPSTKGFITICARKMQGLVVAGKEKERLYIQPVLQKHIHLTEVRNCSSPGTPHLVF
HQPFTARGPPRHSHMKRLRRQRSAIMPEVTHLELLVVVAPDVQLVHRQDTERYILTNLNI
ASELLRDMTLGANMRVHLVRMIILSEPEPEINISTNISSSLTSVCEWARRVIPSNDTDPL
HADLVLYITRFDLELPNGNKQVRGVTQLGGACSSQWSCVITEDTGFDLGITIAHEIGHSF
GINHDGIGNTCSSSGFMMASDGGYNSVDLTWSQCSRQQLYTFFSEGKADCVKDLPVLVGS
LQDWKPGLYYGVDDQCRIAFGSTARACSFTNTDLPVCRVLSCHVKPDDNSSCKRLLVPLL
DGTECAPNQWCLKGRCVSPDQLSSSSSVVVHGSWSSWSQFSPCSRICGGGVTSRTRQCNN
PRPAFGGNDCKGRDTEAELCHQQQCERTQLAFMAEQCAQTDLQPLYLSPNTASLYTWIPA
VGFVTGDEQCRYMCQCKGENFIVSRGSQFVDGTRCEPDSPAPLGATTACLGGTCQLFGCD
GVLKSGKVEDVCGVCGGDGSSCSLTSQSYSGGQAREYVTFLTLPVNATQVHIVNRAPVFT
HLAVLIGNQYVVSGSGSIALNITHPSPLEDGRLVYRLYLTPDLLPLMEELLLPGTVTEET
HIQVYRKYGKEYGEQTSPNITYHFYTPMSNNAFIKEIPRGKWTVLTTSCSVTCGSGIQKS
MYVCMDDDTKEHLEEVYCNSAPLLLLQQTTCHLPACPPSWEMGEFGPCSALCGGGEKVRP
VRCVQRQGADVLQVAVSECPQHSAIQSVDTCNFQPCPARWNASEAGVCSAVCGPGAAKRV
VTCVRSEGGHDVEVEHSLCSGLFKPPVLVSCVVDVCPIGWESKGQDQPILNKSPGLRYRS
RYLTVYVWSPVIGQCSKTCGNGTLQVWFSCLDHQTRLVVPEVYCDASSKPEPHTESCNPS
PCPPMWRYKQGVCSVSCGGGVAHRVLYCSQETEGDEEVVVNNTECSNMTKPIAVVTCNSN
SCPARWSVLRTGACTTSCDLGLARRHVSCVEYIHGEDSEVSEERCHAAVKPATTVPCLVQ
VCTFRWDVKDWNQCSVPCGYGIQSRAVSCMGPTKPEPLSPLLCMHMPKPITIRGCQMDDC
RVLEKTSALTHTHTTNTKSLETRDQLPSPQGMEVTPMDEEPLLSPTLSLTQTPLTATEPT
TPQTTTAMPTVTPKTSLCGQLLLEESGTVDLRHETGRCILSIGRPLDEVIHMKVESSSLS
CKKREYVAFYDRLVLVRKCDQLEDTELTSRTNVLMVRQHLLSPGNGVLLTYSSQKNNKKS
HHQDCDVQLFAPSGVIENPTMTSELGGHTCRVLINAPPSVKIRIRALSMGPVVNSTAAQS
TFIMIRDVDVLKTNVFKGQRLFDWRSAGSMAEIEFHGEYLHSNGRFRAEYSFLEP
NT seq
4668 nt
NT seq
+upstream
nt +downstream
nt
atggcagccttggcgctgctctgtctgctgtcagtgctgccaggctccacagcaatacta
atgagatctccattggaggagctatttctgcactccctggatcaaaaggacatggtgttt
tattttggtactgactctgctacttcagtgccggagtttcagctcatctggacagactgt
gcctctacggagctgcacactggcccctggcgatgctccttcgagacagaagggaagcgc
tttgtgctggggctcggggagaggaagcagtccttctcctgtcagtccacattagagaca
gctcggaacaccactctcaacaccacaaggaaaagtcatgccatgtgttgtcagcaggcc
agagttctacatcccccttcaactaaaggatttatcaccatctgtgccaggaaaatgcaa
ggcctggttgttgcaggtaaagagaaggagagactatacattcagccagtgcttcaaaaa
cacattcatctgactgaagtcagaaactgttccagtccaggaacacctcatctggtgttc
caccagccatttactgccagaggcccccccagacactctcacatgaagaggctgcgtcgc
caaaggtcagccataatgcctgaggtgacccacctggagctgctagtggtggtggcgcct
gacgtgcagctggtccacaggcaggacacagagagatacatacttaccaacctcaacatt
gcctcagagctgctgagggacatgacactgggcgccaacatgagagtgcatctggtccgc
atgatcatcctctcagaaccagagccagagattaacatctccaccaacatctcctcatct
ctgacgagtgtgtgtgagtgggccagaagggtcatcccctctaatgacactgaccccctg
catgctgaccttgtgttatacatcacaagatttgatctggagctgcccaatgggaacaag
caggtgaggggcgtgacccagctaggcggggcatgttctagccaatggagttgtgtaatc
acagaggacacaggctttgatctgggcattaccatcgctcatgagataggccacagcttt
ggcataaaccatgatgggattggtaacacatgcagcagcagtggctttatgatggcctct
gatggaggctacaacagtgtggatctcacctggtcccagtgcagcagacagcagctgtac
acattcttcagtgaaggcaaggctgactgtgtgaaagacttgcctgtcctggttggctct
ctgcaagactggaagccaggcctttattatggtgtggacgaccagtgccggatagcgttt
ggtagcacggccagggcctgctccttcaccaacactgacctgcctgtgtgccgtgttctc
tcctgccacgtcaaacctgatgacaacagctcatgtaaacgcctgctggtgcctctgttg
gatgggacagagtgtgcacccaaccagtggtgcctgaagggccgctgtgtgtccccagac
cagctcagctcctcttcctctgtggtggtgcacgggtcctggtccagctggtcccagttc
tccccatgctcacggatatgtggcgggggcgtcacttcccggaccaggcaatgcaataac
ccacgacctgcatttggtgggaatgattgcaagggcagggatacagaggcggaactttgt
caccagcagcagtgtgaaaggacccagctggccttcatggcagagcagtgcgcccagaca
gatctacagcccctgtacctgtcccccaacacggcctccctctacacctggatccccgct
gtaggctttgtcacaggggatgaacagtgcaggtacatgtgccagtgtaagggagagaac
ttcattgtgagccgtgggtctcagtttgtggatgggactcgttgtgaaccagacagtcca
gctccccttggtgccacgacagcttgtctaggagggacgtgccagctgtttggctgtgat
ggagtgttgaagtctgggaaggtggaggatgtgtgtggggtatgtggaggggatggctcc
tcttgcagtctcacctctcagtcttacagtggtggtcaggccagagagtacgtcacattc
ctgaccctgccagtgaacgccactcaggttcacattgtcaacagggcacccgtcttcact
cacctggcggtgttgattgggaatcagtatgttgtgtctgggagtggcagcattgcgtta
aacatcactcacccctctcctctggaggatggtcgtctggtttatcgtctgtacctgacc
cctgacctcctgcctctcatggaggagctgctgctgcctggaactgttacagaggagaca
cacatacaggtctatcggaaatatggaaaagaatatggagaacaaaccagtccaaacatc
acctaccacttttatactcccatgagtaataatgcttttataaaagagatacccaggggc
aagtggactgttctcacaacatcctgctctgtcacctgtggatctggcatacagaaatct
atgtatgtctgtatggatgacgacaccaaggagcatctggaggaggtctactgtaattca
gctccccttctcctgcttcagcagacaacctgtcacctcccagcctgtccccccagctgg
gagatgggagagtttgggccctgcagtgccttgtgtggtggtggagagaaagtgcgccct
gtgagatgtgttcaaaggcaaggagcagatgtcctacaggtggccgtttctgaatgtcca
caacactcagccatacaatcagtggatacatgcaactttcaaccctgccctgcaaggtgg
aatgcgtcagaagccggggtgtgttcagcggtgtgtgggcccggagcggccaaacgcgtt
gtgacatgtgtgcggtccgaaggtggtcatgatgttgaggtggagcatagcttgtgttca
gggctcttcaaaccacctgtcttagtgtcttgtgtggtcgatgtctgccctattggctgg
gagtctaagggacaggatcaacctatacttaacaaatcccctggtttaaggtaccgctcc
aggtacctaacagtgtatgtttggagccctgtgataggccaatgctcaaagacctgcgga
aatggtaccctgcaggtgtggttttcatgtctggaccaccagaccaggctagtggtgcct
gaggtctactgtgatgcctccagcaaaccagagcctcacacagagtcctgcaacccttcc
ccttgccctcccatgtggcgctacaagcagggagtgtgcagtgtgtcgtgtggaggaggc
gtggcccatagggtgctatactgctcccaggagaccgagggagatgaggaggtggttgtg
aacaatacagagtgcagtaacatgaccaaacccatagcagtggtcacatgcaactccaac
agctgtccagccaggtggagcgtgctgaggacgggggcctgtactacgtcttgtgatctg
gggttagccaggaggcatgtctcctgtgttgagtatatccatggggaggacagtgaggtg
tctgaggagagatgccatgcagccgttaaacctgctaccacggtaccctgtctggtgcag
gtgtgcaccttcagatgggacgtgaaagactggaaccagtgttcagtgccgtgtgggtat
gggatccagtctagagcagtgtcctgcatgggacccactaagcctgagcccctcagccca
ctgctctgcatgcacatgcccaagcccatcaccatccggggctgccagatggacgactgc
agggtcttagagaagactagtgccctcacccacacacacaccaccaacaccaaatcacta
gagaccagggaccagttacccagtccccagggcatggaagtcactcccatggatgaggag
ccactcctgtctcctactctcagcctgacccagacacccctgactgcaacagaaccgacc
accccacagaccaccacagccatgcccactgtgacacctaaaaccagtctgtgtgggcag
cttctgctggaggagtcaggcacagtggacttgagacatgagacaggtcgctgcatcctg
tcaataggccggcccctggatgaggtcatccacatgaaagtagagtccagctccctaagc
tgcaagaaaagggagtatgtggcgttctatgacaggctggtactggtcaggaagtgtgac
cagcttgaggacactgaactgacctccaggaccaacgtcctgatggtgcgccagcatctc
ttgtcccctggaaacggagtgctgctgacttacagcagtcagaagaacaacaagaagagt
caccaccaggactgtgatgtccagctgtttgctcccagcggggtcattgagaatccaacg
atgacctccgagttgggcggtcacacctgtcgagtcctcatcaacgcccctccctcagtg
aagattaggatccgcgctctgagcatgggccctgtggtcaacagcacagcagcccagtcc
accttcattatgatacgagatgtagacgtcttgaagaccaacgtgttcaagggccaacgg
ctttttgactggcgatcagctggaagcatggcagagatagaatttcatggcgagtacctg
catagcaatgggagattccgagctgaatactcattcttggagccttga
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