Oncorhynchus gorbuscha (pink salmon): 124036267
Help
Entry
124036267 CDS
T07892
Name
(RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform-like
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03015
mRNA surveillance pathway
ogo04261
Adrenergic signaling in cardiomyocytes
ogo04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
124036267
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
124036267
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
124036267
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ogo01009
]
124036267
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogo03019
]
124036267
03036 Chromosome and associated proteins [BR:
ogo03036
]
124036267
Protein phosphatases and associated proteins [BR:
ogo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
124036267
Messenger RNA biogenesis [BR:
ogo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
124036267
Chromosome and associated proteins [BR:
ogo03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
124036267
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
Beta-prop_HPS5
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
124036267
NCBI-ProteinID:
XP_046206552
LinkDB
All DBs
Position
LG05:complement(62850506..62871869)
Genome browser
AA seq
447 aa
AA seq
DB search
MAGAGGGGNDVQWCFSQVKGAIDDDVAEADIISTVEFNHSGELLATGDKGGRVVIFQQEL
ESKNQPQCRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDKTI
KLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFHPMDLMVEASPRRVFANAHTYH
INSISVNSDCETYLSADDLRINLWNLEITDRSFNIVDIKPANMEELTEVITAAEFHPNQC
NTFVYSSSKGTIRLCDMRASALCDQHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRY
MMTRDYLTVKIWDLNMESRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGNDSVVMT
GSYNNFFRMFDRGYRQDVTLEASRESSKPRSVLKPRKVCTGGKRKKDEISVDSLDFNKKI
LHTAWHPQDNIIAVATTNNLYIFQDRL
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggcaggagccggcggcgggggcaatgatgtgcagtggtgtttttctcaagtcaaagga
gcgattgatgacgatgttgctgaagctgacattatatccactgtggaattcaatcactct
ggcgagctactagccactggggacaaggggggccgtgttgtcatctttcagcaggagcta
gagagtaagaaccagccacagtgccgtggagagtacaatgtttacagcaccttccagagc
cacgagcctgagttcgactacctgaagagccttgagatcgaggagaagatcaacaagatc
cggtggcttcctcagaagaacgctgcacagttcctcttgtccacgaatgataaaactata
aagctgtggaaaatcagtgaacgggacaagagaccagaggggtacaacctgaaggaagaa
gatggacgttacagagaccccaccactgtcacaacactacgggtcccagtgtttcatccc
atggatctgatggtggaggccagccccagacgagtgtttgctaacgcgcacacctaccac
atcaactccatctcggtcaacagcgactgtgagacctacctgtctgccgatgaccttcgc
atcaacctctggaacctggagatcactgaccgtagctttaacattgtagacatcaagcca
gctaacatggaggagttgacagaggtgatcacagcagcagagttccatcctaaccagtgc
aacacctttgtctacagcagcagcaagggcaccatacgcctctgtgacatgagggcatca
gctctctgtgaccagcactccaaactgtttgaagagcctgaggatccaagcaaccgctca
ttcttctctgagatcatctcctccatctctgatgtcaagttcagccacagtgggcgctac
atgatgacgcgggactacctcaccgtcaaaatctgggacctcaacatggagtcccgtcca
gtagagacttatcaggttcatgaatacctcaggagtaaactgtgctcactctatgagaat
gattgcatctttgataagtttgagtgctgctggaatggaaacgacagtgttgtgatgacg
ggctcatacaacaacttcttccggatgtttgaccgaggctaccggcaggatgtgaccctg
gaggcgtctcgggagagcagtaagcctcgttctgtgctcaagccccgtaaggtgtgcaca
ggtgggaaacgcaagaaggacgaaatcagtgtagacagcctggactttaacaagaagatc
ctccacacggcctggcacccccaggacaacatcattgccgtggccaccactaacaacctc
tatatatttcaggaccgactgtaa
DBGET
integrated database retrieval system
