Oncorhynchus gorbuscha (pink salmon): 124036282
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Entry
124036282 CDS
T07892
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 1-like isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo00061
Fatty acid biosynthesis
ogo00071
Fatty acid degradation
ogo01100
Metabolic pathways
ogo01212
Fatty acid metabolism
ogo03320
PPAR signaling pathway
ogo04146
Peroxisome
ogo04216
Ferroptosis
ogo04920
Adipocytokine signaling pathway
Module
ogo_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
124036282
00071 Fatty acid degradation
124036282
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
124036282
09143 Cell growth and death
04216 Ferroptosis
124036282
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
124036282
03320 PPAR signaling pathway
124036282
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ogo01004
]
124036282
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ogo04147
]
124036282
Enzymes [BR:
ogo01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
124036282
Lipid biosynthesis proteins [BR:
ogo01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
124036282
Exosome [BR:
ogo04147
]
Exosomal proteins
Exosomal proteins of breast milk
124036282
Exosomal proteins of breast cancer cells
124036282
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
124036282
NCBI-ProteinID:
XP_046206593
LinkDB
All DBs
Position
LG05:complement(63901402..63926428)
Genome browser
AA seq
750 aa
AA seq
DB search
MSVDPVLLYRLPCEVVPRCALGLRVSSRVLFGAMHFQEWLQSLHSSGGVRGPVREDFWSL
LPSLPSSSSFSLSSLSRSPSTLLGIGALASLTAYWLVTRRRPMQPPCDLNAQSIAVQGEP
NWRRSALLKDDALLEFYYDDTRTAYDMFQRGLRVAGNGPCLGFRKPGEPYQWISYTEVAE
QAQVLGSGLLDKGCQPNPQQFVGIFAQNRPEWIISELACYTFSMAVVPLYDTLGEEAMVH
ILNLAEISLVICDKEEKAESLLGNKEKGATPTLSCLVLFNHCSDAIVERGKNCGVEILEL
AQLMVLGRQNLKDPMPPKPQDLAVVCFTSGTTGKPKGAMITHGNIASNSSSVIKILEGSF
FIRQEDVSISYLPLAHMFERMIQVSMFCHGARVGFYQGDISLLMDDIKTLKPTFFPVVPR
LLNRIYDKILGSVTSPFRRAVLHYAVRRKQAELSSGVVRNNSLWDRLVFNRIQANLGGNL
RFILTASAPISPTVLSFLRATLGCLIFEGYGQTECTAGCTFSMPGDWSAGHVGAPLPCAM
VKLVDIPDMNYYAKNGEGEICIRGHSVFRGYLKDEEKTAEALDSDGWLHSGDVGQWLLNG
TLRIIDRKKHIFKLSQGEYIAPERIENVYMRCVPVLQVFVHGDSLKSHLIGIVVPDPEVF
IDWVKERGIIGSYTELCQHPDVKKAVLEDMTAMGKEAGLKSFEQLKDLHLHPEMFTVSNG
LLTPTLKSRRVDIRRVFQEQITNMYSTTVI
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttgatcctgtgctgttgtatcggcttccatgcgaagtggtccctcgctgtgca
cttggtttacgggtctcgtcacgtgtattatttggagctatgcattttcaggagtggtta
cagtcccttcactccagtgggggggttcggggacctgtgagggaggacttctggagcctt
ctcccctctctcccttcatcatcctctttctccctctcctctctctctcggtccccctcc
actctgctgggtataggggctctggcctcccttactgcatactggctggtgacccgccgt
cggcccatgcagcccccctgtgatctcaatgcccagtctatcgctgtacagggagagccc
aattggaggcgttcagctttgctcaaggacgatgccctgttggagttctactatgatgac
accaggacagcctatgacatgttccagagaggactgagggtggcagggaatggcccatgc
cttggcttcaggaaacctggggaaccttaccagtggatctcctacactgaggtggctgaa
caggcacaggtgctgggctctgggcttttggacaaaggctgccaaccaaaccctcagcag
tttgttggaatatttgcccagaacagaccagagtggattatttccgagctggcctgctac
actttctctatggccgtggtgcccctgtatgacacacttggagaggaggccatggtgcat
atcctcaacctggcggagatctcactggtgatctgtgacaaggaggagaaggcagagtcc
cttctggggaataaggagaaaggtgcaacacccactctctcctgtctggtgctctttaat
cactgcagtgatgccatagtggagaggggcaagaactgtggagtggagattctagaactc
gcacagctcatggtacttggacgacagaacctcaaagatcctatgccaccaaaaccccag
gacctggcagtcgtgtgcttcaccagtggaaccacaggaaagccgaagggagccatgatc
acccacggcaacatcgcctccaactcctcctctgttattaagatcctggaggggtcattt
tttattcggcaagaagacgtgtcaatctcttacttgcctcttgctcacatgtttgagagg
atgattcaggtgtccatgttctgtcatggggccagggtaggattctaccaaggggatatc
tccctactcatggacgatattaagactctgaaacccactttcttcccagtggtgcctcgc
ctactcaaccgcatctacgacaagatcttaggctctgtgacgtccccatttcgccgggca
gtgctgcactatgcagtgaggaggaagcaggctgagctcagcagtggggttgtacgtaac
aacagtctgtgggacaggctggtatttaacaggattcaggctaatttaggaggtaatctg
aggttcatcctgactgcctcggcccccatctcccccaccgtgctctccttcctcagggcc
accctcggctgtctgatctttgagggttacgggcagactgaatgcacagcaggctgcacc
ttctccatgccaggagactggagtgcaggccatgttggcgctcccctgccctgtgcaatg
gtgaagttggttgacatccctgatatgaactattatgccaagaacggagaaggagagatc
tgtatccgtggccacagtgtgttccggggttacctgaaggatgaggagaaaacggcagag
gccctggatagcgatggctggctgcacagtggagatgtgggccagtggttactgaacggg
acacttcgcatcatagacaggaagaagcatatcttcaagctgtcccagggagagtacatc
gcccctgaaaggattgagaacgtctacatgcgttgtgtccctgtgctacaggtctttgtg
catggtgacagcttaaagtctcacctgattggtattgttgtgccagacccagaagtgttt
attgattgggttaaggagaggggaatcattggatcctacacggagctctgccagcatcca
gatgtgaagaaagcagtgttagaagacatgacagctatggggaaggaagctgggctgaag
tcttttgagcagttgaaggacctgcacctgcatccagagatgttcactgtgagcaacggc
cttctcacccccaccctgaagagcagacgagtggacatccgcagggtcttccaggaacag
atcacaaacatgtacagcacaacagtcatctag
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