Oncorhynchus gorbuscha (pink salmon): 124036319
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Entry
124036319 CDS
T07892
Name
(RefSeq) vacuolar protein sorting-associated protein 33A-like isoform X1
KO
K20182
vacuolar protein sorting-associated protein 33A
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04140
Autophagy - animal
ogo04148
Efferocytosis
ogo05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
124036319
04148 Efferocytosis
124036319
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
124036319
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124036319
Membrane trafficking [BR:
ogo04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
124036319
Hops complex
124036319
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
Takusan
Motif
Other DBs
NCBI-GeneID:
124036319
NCBI-ProteinID:
XP_046206705
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All DBs
Position
LG05:66228912..66244594
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AA seq
599 aa
AA seq
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MSAHLSYGRVNLNILRKAARKELREFLDKCAGSKAIVWDEYLTGPFGLIAQYSLLKEHEV
EKMFTLKGGRLPAADVKNIIFFVRPRLELMDIIAENVISEDKMHSPRDFHILFVPRRSML
CEQRLKEQGVLGSFINIDEYILDLIPYDGDLLSMESEGAFRECYLESDQTSLYHTAKGLM
TLQALYGTIPQIFGKGECARHVANMMLRMKREFAGSQTQILPVFDSLLLLDRNIDLLTPL
ATQLTYEGLIDEVYGITNGYAKLPPEKFAAQKKQGEVGKDLPTEPKKMQLNSAEELYAEI
RDKNFNAIGAALSKKAKIISAAFEERHNAKTVGEIKQFVSQLPHMQAARSSLANHTSIAE
LIKDITTSEAFFDNLTVEQEFMTGVDTDKVNTYIEDCIAQKDPLIKILRLVCMQSVCNNG
LKQKILDYYKREILQTYGYEHMLTLNNLERTGLLKPQTSTRNNYPTIRKTLKLWMEDANE
QNPNDISYVYSGYAPLSIRLTQVLARPGWRSIEEVLKMLPGPHFEERQQLPAGLHKKRQQ
GENRTTLVFFLGGVTYAEVAALRFLSQMEDGGTEYIIATTKLINGTSWIKSLMDRPEAP
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgcacttatcctatggaagagtaaatttaaacattttgaggaaagcagcgcgg
aaggagctccgtgagtttttggacaaatgtgcaggaagcaaggctattgtgtgggatgaa
tacctgactggaccctttggattgatagcacaatattccttgctgaaggaacatgaggtg
gagaagatgttcaccctcaaaggggggcgtcttcctgctgctgatgtgaaaaatataatc
ttctttgttcgtcccagactggaactgatggatattatagctgagaatgtcatcagtgag
gataagatgcattccccacgtgacttccacatcctgtttgtgccccggcggagcatgctc
tgtgagcagcggctgaaggagcagggcgtcctgggctcgttcatcaacatagacgagtac
atcctagacctcatcccttatgatggagacttgctctccatggagtctgagggggccttc
agggaatgctatctagaaagtgaccagacaagtctttaccacaccgccaagggccttatg
actctccaggctctgtatgggaccatcccccagatatttgggaaaggggagtgtgcacgg
catgtagctaatatgatgcttaggatgaagagggagtttgctggcagtcagactcagatc
ctgcctgtgtttgactcactgctgctgctggaccgcaacatagacctgcttacccctctg
gccacacagctcacctatgagggcctcattgacgaagtttatggaatcaccaacggttat
gcgaagttgcctccggagaagtttgctgcccaaaagaagcagggtgaggtgggtaaagac
ctgcccacggagcccaagaagatgcagctcaactcagcggaggagctgtatgctgagata
cgggacaaaaacttcaatgccataggggctgcactgagcaagaaggccaagatcatctct
gctgcctttgaggagcgacataatgccaaaacagttggcgagataaagcagtttgtgtcc
cagctgccccacatgcaggcagcacggagctcgctggccaatcacacctccatagctgaa
ctcattaaggacatcaccacctcagaggccttctttgataacctgacagtggagcaggag
tttatgactggagttgacacagacaaggttaacacatatattgaggactgtattgcccag
aaggatcctctgatcaaaatcttgcggctggtctgtatgcagtcagtctgcaacaatggc
ctcaagcagaagatattggactactacaagagagagatcctgcagacctatggatatgaa
cacatgcttaccctcaacaacctggagaggacaggtcttctgaagccccagacaagcacc
aggaataactaccccaccatcaggaagacgctcaaactctggatggaggatgccaacgaa
cagaaccccaatgacatctcctatgtgtacagtggttatgctcctctcagcatccgtctg
acccaggtgttggccaggcccgggtggcgcagcatcgaggaagttctgaagatgctccct
ggtccacacttcgaggagagacaacagctgcctgctggtctccataagaaacgccagcag
ggggagaacaggaccaccctggtgttctttctgggaggggtgacttacgcagaagttgct
gccttgcgcttcctgtctcagatggaggatggtggcacagagtacatcattgccactacc
aagctcatcaatggtaccagctggatcaagtctctgatggaccgcccggaggccccctga
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