Oncorhynchus gorbuscha (pink salmon): 124036322
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Entry
124036322 CDS
T07892
Name
(RefSeq) rab5 GDP/GTP exchange factor-like isoform X1
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04137
Mitophagy - animal
ogo04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
124036322
04137 Mitophagy - animal
124036322
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124036322
Membrane trafficking [BR:
ogo04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
124036322
Protein recycling
Other Rab GTPase associated proteins
124036322
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS9
zf-A20
DUF5601
YtxH
Rab11-FIP3
NrS1-1_pol-like_HBD
Motif
Other DBs
NCBI-GeneID:
124036322
NCBI-ProteinID:
XP_046206711
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All DBs
Position
LG05:66272262..66277040
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AA seq
474 aa
AA seq
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MAAEQQRGIRVTQAELLCKDACGYYGNPAWQGFCSKCWRERTRKAEADRQETGPHNDAGS
PLTFSKFEEKKNMEKGRKVNTMRRLFWGGPSPPKRPESSEGQVAILKAYQSIEPGDFTSF
LKLLRNPSSQRLQSRCTAFLNTMEAYHGLPVQKQSDLVQDFYQNIAVHFSSLSEIQVSQM
MEHMEKLIMTRLHKWVFCHDSCDDEVKDLALQRRIRSLNWVTPHMLRVPFPDERAEVVSD
PFLPAITAIIEMDAKRAPQDKLTCVCKCSQNVFQALSTSNSEPANADDYLSGLIYVVLKA
NPPRLHSNMQYVIRFGLPHSLMAGESGYYFTNLCCAVAFIEKLDGPALNLSPVEFEGYMQ
GRRAPSKRGSERQKMARETQDQLEDLKGRQEKVDQGINALKEQLQHWVQSVKAQIDEVTS
QSALTQEEIKAQSEFLQSHSVSTLTQADDVKDQSVLLLDGQESNNNTCLTEAEC
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggagcagcaaagagggatccgagtcactcaagcagagcttctctgcaaggat
gcgtgtggttattatggcaaccctgcatggcagggattttgctccaagtgctggcgagaa
cgaacccgtaaagcagaggcggacaggcaggagactgggccccacaatgatgcaggttct
cccctcaccttttctaaatttgaggagaagaagaatatggagaagggtcgcaaagtgaat
acgatgaggaggctcttctggggtggaccgtcccctcctaaacgcccagagtcttcagag
ggccaggtggctatattaaaagcctatcagagcattgagccaggggattttaccagcttc
ctgaagctgctgaggaacccatcctctcaacgtctgcagtcccgttgcactgctttcctc
aacaccatggaggcttaccacggcctgccagtgcagaagcaatctgaccttgttcaagac
ttttaccagaacatcgctgtgcatttcagtagtctttcagagattcaggtctctcagatg
atggagcacatggagaagctgatcatgacgcgtctgcacaagtgggtgttctgccatgac
agctgtgacgatgaagtgaaagacttggcactccagaggaggatacggtccttaaactgg
gtcaccccccacatgctgagggtgcctttccctgacgagcgggctgaggttgtcagtgat
ccctttttgcctgctataacagccataatcgagatggatgccaagcgcgcgccacaggac
aagcttacatgcgtatgtaagtgcagtcagaatgtcttccaggctctctccacttccaat
agtgagccagcaaatgctgacgactacctgtctggcctgatttacgtagtactaaaggcc
aacccaccccggcttcactccaacatgcagtatgtgatccgcttcggcctccctcacagc
ctgatggcaggagagagtggctactacttcaccaatttgtgttgtgcagtggccttcatt
gagaagctggatgggccagcactcaacctaagcccagtggagtttgagggctacatgcag
ggtcgccgtgctccctcaaagaggggcagtgagaggcaaaagatggccagggagacgcaa
gaccaactagaggacctgaagggtcgacaggagaaggtggaccaaggaataaatgccctc
aaagagcagctacagcattgggtacagtctgtcaaggcacagatagatgaggtaacatcc
cagtctgctctgacacaagaagaaattaaagcccagtcagagtttttgcaaagccattct
gtctctactctaacacaggcagatgatgtcaaagaccagtcagtgttgttgctagatggt
caagagtccaacaacaacacttgtctaacagaggcagagtgttag
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