KEGG   Oncorhynchus gorbuscha (pink salmon): 124036435
Entry
124036435         CDS       T07892                                 
Name
(RefSeq) clathrin heavy chain 1-like
  KO
K04646  clathrin heavy chain
Organism
ogo  Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04142  Lysosome
ogo04144  Endocytosis
ogo05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:ogo00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    124036435
   04142 Lysosome
    124036435
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    124036435
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ogo04131]
    124036435
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ogo04147]
    124036435
Membrane trafficking [BR:ogo04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Clathrin
    124036435
Exosome [BR:ogo04147]
 Exosomal proteins
  Proteins found in most exosomes
   124036435
SSDB
Motif
Pfam: Clathrin Clathrin_propel Clathrin_H_link Clathrin-link TPR_COPA_B TPR_PEP5_VPS11 TPR_Vps41 Gp18_dom_I IFS capSnatchArena HEAT_Nup120
Other DBs
NCBI-GeneID: 124036435
NCBI-ProteinID: XP_046206976
LinkDB
Position
LG05:complement(70458336..70494420)
AA seq 1689 aa
MAQILPIRFQEHLQLQNLGVNPANIGFSYLTMESDKFICIREKVGEQNQVVIIDMADPNN
PSRRPISADSAIMNPTSKVIALKAAKCLQIFNIEMKSKMKAHTMTEEVMFWKWISVNTVA
LVTEAAVYHWSMEGDSQPIKVFDRHVSLAGCQIINYRTNEQQKWLLLIGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAAAFGEFKVEGNTKASTLFCFAVRSQAGGKLHIIEVGHPATGN
QPFTKKAVDVFFPPEAQTDFPVAMQIGTKHGVIYLITKYGYIHLYDLESGVCIYMNRISA
ETIFVTAPHEPTSGIIGVNKKGQVLSVCVEEENIVNYATNVLQNPDLGLRMAMRSNLAGA
DELFARKFNTLFAQGSYAEAAKVAASTPKGILRTAETIRKFQSVPGQPGQASPLLQYFGI
LLDEGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECCEELGDLVKAVDPTLALSVYL
RANVPSKVIQCFAETGQFQKIVLYAKKVGYSPDWVFLLRNVMRVSPEQGLQFSQMLVADE
EPLANINQIVDVFMEGSLIQQCTSFLLDALKNNQPAEGHLQTRLLEMNLLHAPQVADAIL
GNQMFSHYDRAHIAQLCEKAGLLQRALEHYTDLFDIKRTLVHTHLLNPEWLVNFFGALSV
EDSIECLRTMLSANIRQNLQLCVQVASKYHEQLGTNALVDLFESFKSFEGVFYFLGSIVN
FSQDPDVHFKYIQAACKTGQIKEVERICRESNCYDPDRVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYHNTLQKYIEIYVQKVNPSRLPVVIGGLLDVDCAEDVIKNLILVVRGQF
STDELVTEVEKRNRLKLLLPWLESRIHEGCEEPATHNALAKIYIDSNNNPEHFLKENTFY
DSTVVGKYCEKRDPHLACVAYERGQCDLDLIKVCNENSLFKSEARYLVRRKDPELWANVL
EENNPYRRQLIDQMVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFKKFDVNTS
AIQVLIEHISNLDRAYEFAERCNEAAVWSQLARAQLQRDLVKEAIDSYIKADDPSAYMEV
VSAASKNDNWEDLVKFLQMARKKARESYVETELIFALAKTGRLAELDEFVNGPNNAHIQQ
VGDRCFEESMYDAAKLLYNNVSNFARLASTLVHLGEYQAAVDSARKANSTRTWKEVCFAC
VAGEEFRLAQICGLHIVIHADELEELISDYQDRGYYEELIALLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQSHLWAELVFLYDKYEEYDNAVLTMMS
HPTDAWKEVQFKDIIAKVANVELYYKSLSFYLDYKPLLTNDLLTILSPRLDHSRVVTYFT
KMNQLKLVKPYLRSVQSHNNKGVNEALNNLLTEEEDYQGLRASIDAYGNFDTIVLAMRLE
KHELIEFRRIAAYLYKGNNRWRQSVELCKKDKLYKDAMLYAAESKDAELAETLLQWFLEE
GRKECFAACLFASYDLLHPDVVLELAWRHNIMDFAMPYFIQVMREYLTKVDKLEESESQR
KTEEKVPDPTPIVFGQQLMLTAGSAPVAPQPGYPGGYGYTAPGYPTQPPLRLQHVDHLYP
IQPPYGYNM
NT seq 5070 nt   +upstreamnt  +downstreamnt
atggctcagatactgccgatacgatttcaggaacatctgcagctgcagaacctaggggtg
aatccggccaacatcgggttcagctacctgaccatggagtctgacaaattcatctgcatc
cgggagaaggtgggtgagcaaaaccaggtggtgatcatagacatggctgaccccaataac
cccagcaggcgacccatttctgctgacagcgccattatgaaccctacaagcaaggtcatc
gccctgaaagctgctaagtgcctgcagatcttcaacattgagatgaagagtaagatgaag
gctcacaccatgacagaggaagtcatgttctggaagtggatctctgtcaacaccgtcgcc
ttggtgactgaagcggccgtctaccattggagcatggagggggactctcagccaatcaaa
gtatttgatcggcacgtcagtctggctggttgccagatcataaactacagaacaaacgaa
cagcagaagtggcttctgcttatcggtatctcggcacagcaaaaccgtgtggtgggggcc
atgcagctgtactctgtggacaggaaggtgtcccagcccatcgagggacatgctgcagcc
ttcggagagtttaaggtggagggcaacaccaaagcctccactctcttctgctttgctgtg
cgcagccaggctggtggcaagctgcatatcatagaggtgggtcacccggctacagggaac
cagccatttaccaagaaggcggttgatgtgttcttccctcctgaggcgcagacagacttc
cccgtcgccatgcagattggcaccaagcatggcgtgatctacctcatcactaagtatggc
tacatccacctgtatgatctggagtcgggagtgtgtatctatatgaaccgcatcagcgct
gagaccatcttcgtcactgccccccacgaacccacctccggcatcatcggggttaacaag
aagggacaggtgttgtcagtgtgtgtggaggaggagaacatagttaactatgccaccaac
gtgctgcagaacccagacctgggcctgaggatggccatgcgttctaacctggccggggca
gatgagttgtttgccaggaagttcaacacgctgttcgcccagggttcctacgccgaggct
gccaaggtggctgcctccacaccaaagggtatcctgcgtacagcggagaccatccgtaag
ttccagagtgtgccaggccagccgggccaggcctctcccctgcttcagtactttggcatc
ctgctggacgaaggccagctcaacaagtttgagtctctggagctgtgcaggcccgtgcta
cagcagggacgcaagcagctgctggagaagtggctgaaagaggataagctggagtgttgt
gaggagcttggtgacctggttaaggcagtagatcctactctggccctcagcgtctacctc
agggccaacgtacccagcaaggtgatccagtgcttcgctgagaccggacagttccagaag
atagtgctttacgccaagaaggtgggctactctccagactgggtgtttctgttgaggaat
gtgatgcgggtcagtccagaacagggtctacagttctctcagatgctggttgcagatgag
gagcccctggccaacatcaaccagatagtggatgtgttcatggagggcagtctgatccag
cagtgcacctcattcctattggacgctctgaagaacaaccagccagccgagggacaccta
cagacacgcctactggaaatgaacctccttcatgctccccaggtggctgacgcaatcctg
ggaaaccagatgtttagtcactatgaccgagcccacatcgcccagctgtgtgagaaggct
gggctgctgcagagggctctagagcactacactgacctgttcgacatcaaaaggactctc
gtacacacacacctgctcaaccctgagtggctggtgaacttctttggcgccctgtcagta
gaggactcgatagagtgtcttcggaccatgttatcagccaacatccgacagaaccttcag
ctgtgtgtccaggtggcatctaaataccacgaacagctgggaacaaatgccctggtggat
ctcttcgagtccttcaagagctttgagggtgtgttctacttcctgggttccatagtgaac
tttagccaggaccccgacgttcattttaaatacatccaggcggcctgtaagaccggacag
atcaaggaggtggaacgcatctgtagagagagcaactgttacgacccggacagggtcaag
aacttcctaaaggaggctaaactgacagaccagctgcctctgatcatagtgtgtgaccgc
tttgactttgtccatgacctggttctctacctctaccacaacactctgcagaagtacatt
gagatctatgttcagaaggtgaaccctagccggctgccggtggtgataggaggtctgttg
gatgtagactgtgctgaagatgtcattaagaacctgatcttggtggtgagaggacagttc
tccacagacgagctggtgacagaggtggagaagaggaacagactgaagctgttgttgccg
tggctggagtctcgtatccacgagggctgtgaggagccggctactcacaatgccttggct
aagatctacatagacagtaacaataacccggagcacttcctgaaggagaacaccttctac
gacagcactgtagtggggaagtattgtgagaagagagacccccatctcgcctgtgtcgcc
tatgagaggggccagtgtgacctggaccttatcaaggtgtgcaatgagaactccctgttc
aagagtgaggctcgctacctggtcagacggaaagacccagaactatgggccaatgttcta
gaggagaacaacccttatagacgccaactcatagaccagatggtgcagacagctctgtca
gagacccaggacccagaggaggtatcggtgactgtcaaggcctttatgacagctgacctg
cccaatgagctcatcgaactactggagaagattgtactggacaactcagtcttcagcgag
caccgaaacctccagaacctgttgatcctgacggccatcaaggcagaccggacacgtgtg
atggagtacatcaaccgcctagacaactacgacgccccagacatcgctaacatcgccatc
agcaacgagctcttcgaggaggccttcgccatcttcaaaaagtttgacgtcaacacctcc
gccattcaggttctgatcgagcatatcagtaacctggacagagcctatgagtttgcagag
cgttgtaatgaggctgctgtatggagtcagctggccagagcccagctccagagagacctg
gttaaagaagccatcgactcctacatcaaagctgatgacccgtcagcctacatggaggtg
gtcagcgcggccagcaagaacgataactgggaggatctggtgaagttccttcagatggct
cgtaagaaggcccgggagtcctacgtagagacagaactcatctttgctctggctaaaact
ggcagactggccgaactagatgagtttgttaacggccctaacaatgcccatatacaacag
gtgggagataggtgttttgaggagagcatgtatgatgctgccaagctgctgtataataat
gtgtccaactttgcccgcctggcgtccacgctggtccacctaggagagtaccaagctgct
gtggacagcgccaggaaagccaacagcacacgcacctggaaggaggtgtgttttgcgtgt
gtggctggggaggagtttcggttggctcagatctgtggtcttcacatcgtcatccacgct
gatgaactggaggagctcatcagtgactatcaggaccggggctattatgaggagctgata
gccctgttggaggcagcattgggtttggagcgcgctcacatgggcatgttcacagagctg
gccatcctctactccaaattcaaaccccagaagatgagagaacatctggaactcttctgg
tcccgtgtcaacatccctaaggtgctgcgagcggcggagcagtcccacctgtgggcggag
ctagtgtttctgtatgataaatacgaggagtatgacaatgctgtcctcacgatgatgtca
caccctactgacgcatggaaggaggtgcagttcaaggacatcatcgccaaggtggccaat
gtggagctgtactacaaatccctttccttttacctggattacaaacctctgctgacaaac
gaccttctaaccatactatcaccacggttagaccacagccgggtggtcacatacttcacc
aagatgaaccagttgaagttggtaaagccttacctgcggtcagtccagagtcacaacaac
aagggagtcaacgaggccctcaataacctactgacagaggaggaggactaccagggtctt
agggcatcgatcgatgcgtatggtaactttgacaccattgttctggccatgagactggag
aagcatgagctgattgagttcagacgcatcgcagcatacctctacaaaggcaacaaccgc
tggagacagagcgtggaactctgcaagaaggacaaattatacaaggatgcaatgctgtat
gctgccgagtctaaggatgcagagttggctgagaccctgctgcagtggttccttgaggag
ggtaggaaggagtgtttcgctgcctgtctgtttgcctcctatgacctgctgcaccctgat
gtggtgctggagctggcctggagacacaacatcatggactttgccatgccatacttcatc
caggtcatgagggagtatctcaccaaggtggacaaactggaggagtcagaaagccaaagg
aagactgaggaaaaagtcccagatcccacccccatagtgtttggtcaacagctgatgttg
acagcaggttccgctccagtggctccccagccaggatatccaggaggctatggatacact
gctccaggctaccccacccagccccccctacggctacaacatgtagaccacctctacccc
attcagcccccctacggctacaacatgtag

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