Oncorhynchus gorbuscha (pink salmon): 124036435
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Entry
124036435 CDS
T07892
Name
(RefSeq) clathrin heavy chain 1-like
KO
K04646
clathrin heavy chain
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04142
Lysosome
ogo04144
Endocytosis
ogo05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124036435
04142 Lysosome
124036435
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
124036435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124036435
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ogo04147
]
124036435
Membrane trafficking [BR:
ogo04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
124036435
Exosome [BR:
ogo04147
]
Exosomal proteins
Proteins found in most exosomes
124036435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_PEP5_VPS11
TPR_Vps41
Gp18_dom_I
IFS
capSnatchArena
HEAT_Nup120
Motif
Other DBs
NCBI-GeneID:
124036435
NCBI-ProteinID:
XP_046206976
LinkDB
All DBs
Position
LG05:complement(70458336..70494420)
Genome browser
AA seq
1689 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGVNPANIGFSYLTMESDKFICIREKVGEQNQVVIIDMADPNN
PSRRPISADSAIMNPTSKVIALKAAKCLQIFNIEMKSKMKAHTMTEEVMFWKWISVNTVA
LVTEAAVYHWSMEGDSQPIKVFDRHVSLAGCQIINYRTNEQQKWLLLIGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAAAFGEFKVEGNTKASTLFCFAVRSQAGGKLHIIEVGHPATGN
QPFTKKAVDVFFPPEAQTDFPVAMQIGTKHGVIYLITKYGYIHLYDLESGVCIYMNRISA
ETIFVTAPHEPTSGIIGVNKKGQVLSVCVEEENIVNYATNVLQNPDLGLRMAMRSNLAGA
DELFARKFNTLFAQGSYAEAAKVAASTPKGILRTAETIRKFQSVPGQPGQASPLLQYFGI
LLDEGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECCEELGDLVKAVDPTLALSVYL
RANVPSKVIQCFAETGQFQKIVLYAKKVGYSPDWVFLLRNVMRVSPEQGLQFSQMLVADE
EPLANINQIVDVFMEGSLIQQCTSFLLDALKNNQPAEGHLQTRLLEMNLLHAPQVADAIL
GNQMFSHYDRAHIAQLCEKAGLLQRALEHYTDLFDIKRTLVHTHLLNPEWLVNFFGALSV
EDSIECLRTMLSANIRQNLQLCVQVASKYHEQLGTNALVDLFESFKSFEGVFYFLGSIVN
FSQDPDVHFKYIQAACKTGQIKEVERICRESNCYDPDRVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYHNTLQKYIEIYVQKVNPSRLPVVIGGLLDVDCAEDVIKNLILVVRGQF
STDELVTEVEKRNRLKLLLPWLESRIHEGCEEPATHNALAKIYIDSNNNPEHFLKENTFY
DSTVVGKYCEKRDPHLACVAYERGQCDLDLIKVCNENSLFKSEARYLVRRKDPELWANVL
EENNPYRRQLIDQMVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFKKFDVNTS
AIQVLIEHISNLDRAYEFAERCNEAAVWSQLARAQLQRDLVKEAIDSYIKADDPSAYMEV
VSAASKNDNWEDLVKFLQMARKKARESYVETELIFALAKTGRLAELDEFVNGPNNAHIQQ
VGDRCFEESMYDAAKLLYNNVSNFARLASTLVHLGEYQAAVDSARKANSTRTWKEVCFAC
VAGEEFRLAQICGLHIVIHADELEELISDYQDRGYYEELIALLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQSHLWAELVFLYDKYEEYDNAVLTMMS
HPTDAWKEVQFKDIIAKVANVELYYKSLSFYLDYKPLLTNDLLTILSPRLDHSRVVTYFT
KMNQLKLVKPYLRSVQSHNNKGVNEALNNLLTEEEDYQGLRASIDAYGNFDTIVLAMRLE
KHELIEFRRIAAYLYKGNNRWRQSVELCKKDKLYKDAMLYAAESKDAELAETLLQWFLEE
GRKECFAACLFASYDLLHPDVVLELAWRHNIMDFAMPYFIQVMREYLTKVDKLEESESQR
KTEEKVPDPTPIVFGQQLMLTAGSAPVAPQPGYPGGYGYTAPGYPTQPPLRLQHVDHLYP
IQPPYGYNM
NT seq
5070 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatactgccgatacgatttcaggaacatctgcagctgcagaacctaggggtg
aatccggccaacatcgggttcagctacctgaccatggagtctgacaaattcatctgcatc
cgggagaaggtgggtgagcaaaaccaggtggtgatcatagacatggctgaccccaataac
cccagcaggcgacccatttctgctgacagcgccattatgaaccctacaagcaaggtcatc
gccctgaaagctgctaagtgcctgcagatcttcaacattgagatgaagagtaagatgaag
gctcacaccatgacagaggaagtcatgttctggaagtggatctctgtcaacaccgtcgcc
ttggtgactgaagcggccgtctaccattggagcatggagggggactctcagccaatcaaa
gtatttgatcggcacgtcagtctggctggttgccagatcataaactacagaacaaacgaa
cagcagaagtggcttctgcttatcggtatctcggcacagcaaaaccgtgtggtgggggcc
atgcagctgtactctgtggacaggaaggtgtcccagcccatcgagggacatgctgcagcc
ttcggagagtttaaggtggagggcaacaccaaagcctccactctcttctgctttgctgtg
cgcagccaggctggtggcaagctgcatatcatagaggtgggtcacccggctacagggaac
cagccatttaccaagaaggcggttgatgtgttcttccctcctgaggcgcagacagacttc
cccgtcgccatgcagattggcaccaagcatggcgtgatctacctcatcactaagtatggc
tacatccacctgtatgatctggagtcgggagtgtgtatctatatgaaccgcatcagcgct
gagaccatcttcgtcactgccccccacgaacccacctccggcatcatcggggttaacaag
aagggacaggtgttgtcagtgtgtgtggaggaggagaacatagttaactatgccaccaac
gtgctgcagaacccagacctgggcctgaggatggccatgcgttctaacctggccggggca
gatgagttgtttgccaggaagttcaacacgctgttcgcccagggttcctacgccgaggct
gccaaggtggctgcctccacaccaaagggtatcctgcgtacagcggagaccatccgtaag
ttccagagtgtgccaggccagccgggccaggcctctcccctgcttcagtactttggcatc
ctgctggacgaaggccagctcaacaagtttgagtctctggagctgtgcaggcccgtgcta
cagcagggacgcaagcagctgctggagaagtggctgaaagaggataagctggagtgttgt
gaggagcttggtgacctggttaaggcagtagatcctactctggccctcagcgtctacctc
agggccaacgtacccagcaaggtgatccagtgcttcgctgagaccggacagttccagaag
atagtgctttacgccaagaaggtgggctactctccagactgggtgtttctgttgaggaat
gtgatgcgggtcagtccagaacagggtctacagttctctcagatgctggttgcagatgag
gagcccctggccaacatcaaccagatagtggatgtgttcatggagggcagtctgatccag
cagtgcacctcattcctattggacgctctgaagaacaaccagccagccgagggacaccta
cagacacgcctactggaaatgaacctccttcatgctccccaggtggctgacgcaatcctg
ggaaaccagatgtttagtcactatgaccgagcccacatcgcccagctgtgtgagaaggct
gggctgctgcagagggctctagagcactacactgacctgttcgacatcaaaaggactctc
gtacacacacacctgctcaaccctgagtggctggtgaacttctttggcgccctgtcagta
gaggactcgatagagtgtcttcggaccatgttatcagccaacatccgacagaaccttcag
ctgtgtgtccaggtggcatctaaataccacgaacagctgggaacaaatgccctggtggat
ctcttcgagtccttcaagagctttgagggtgtgttctacttcctgggttccatagtgaac
tttagccaggaccccgacgttcattttaaatacatccaggcggcctgtaagaccggacag
atcaaggaggtggaacgcatctgtagagagagcaactgttacgacccggacagggtcaag
aacttcctaaaggaggctaaactgacagaccagctgcctctgatcatagtgtgtgaccgc
tttgactttgtccatgacctggttctctacctctaccacaacactctgcagaagtacatt
gagatctatgttcagaaggtgaaccctagccggctgccggtggtgataggaggtctgttg
gatgtagactgtgctgaagatgtcattaagaacctgatcttggtggtgagaggacagttc
tccacagacgagctggtgacagaggtggagaagaggaacagactgaagctgttgttgccg
tggctggagtctcgtatccacgagggctgtgaggagccggctactcacaatgccttggct
aagatctacatagacagtaacaataacccggagcacttcctgaaggagaacaccttctac
gacagcactgtagtggggaagtattgtgagaagagagacccccatctcgcctgtgtcgcc
tatgagaggggccagtgtgacctggaccttatcaaggtgtgcaatgagaactccctgttc
aagagtgaggctcgctacctggtcagacggaaagacccagaactatgggccaatgttcta
gaggagaacaacccttatagacgccaactcatagaccagatggtgcagacagctctgtca
gagacccaggacccagaggaggtatcggtgactgtcaaggcctttatgacagctgacctg
cccaatgagctcatcgaactactggagaagattgtactggacaactcagtcttcagcgag
caccgaaacctccagaacctgttgatcctgacggccatcaaggcagaccggacacgtgtg
atggagtacatcaaccgcctagacaactacgacgccccagacatcgctaacatcgccatc
agcaacgagctcttcgaggaggccttcgccatcttcaaaaagtttgacgtcaacacctcc
gccattcaggttctgatcgagcatatcagtaacctggacagagcctatgagtttgcagag
cgttgtaatgaggctgctgtatggagtcagctggccagagcccagctccagagagacctg
gttaaagaagccatcgactcctacatcaaagctgatgacccgtcagcctacatggaggtg
gtcagcgcggccagcaagaacgataactgggaggatctggtgaagttccttcagatggct
cgtaagaaggcccgggagtcctacgtagagacagaactcatctttgctctggctaaaact
ggcagactggccgaactagatgagtttgttaacggccctaacaatgcccatatacaacag
gtgggagataggtgttttgaggagagcatgtatgatgctgccaagctgctgtataataat
gtgtccaactttgcccgcctggcgtccacgctggtccacctaggagagtaccaagctgct
gtggacagcgccaggaaagccaacagcacacgcacctggaaggaggtgtgttttgcgtgt
gtggctggggaggagtttcggttggctcagatctgtggtcttcacatcgtcatccacgct
gatgaactggaggagctcatcagtgactatcaggaccggggctattatgaggagctgata
gccctgttggaggcagcattgggtttggagcgcgctcacatgggcatgttcacagagctg
gccatcctctactccaaattcaaaccccagaagatgagagaacatctggaactcttctgg
tcccgtgtcaacatccctaaggtgctgcgagcggcggagcagtcccacctgtgggcggag
ctagtgtttctgtatgataaatacgaggagtatgacaatgctgtcctcacgatgatgtca
caccctactgacgcatggaaggaggtgcagttcaaggacatcatcgccaaggtggccaat
gtggagctgtactacaaatccctttccttttacctggattacaaacctctgctgacaaac
gaccttctaaccatactatcaccacggttagaccacagccgggtggtcacatacttcacc
aagatgaaccagttgaagttggtaaagccttacctgcggtcagtccagagtcacaacaac
aagggagtcaacgaggccctcaataacctactgacagaggaggaggactaccagggtctt
agggcatcgatcgatgcgtatggtaactttgacaccattgttctggccatgagactggag
aagcatgagctgattgagttcagacgcatcgcagcatacctctacaaaggcaacaaccgc
tggagacagagcgtggaactctgcaagaaggacaaattatacaaggatgcaatgctgtat
gctgccgagtctaaggatgcagagttggctgagaccctgctgcagtggttccttgaggag
ggtaggaaggagtgtttcgctgcctgtctgtttgcctcctatgacctgctgcaccctgat
gtggtgctggagctggcctggagacacaacatcatggactttgccatgccatacttcatc
caggtcatgagggagtatctcaccaaggtggacaaactggaggagtcagaaagccaaagg
aagactgaggaaaaagtcccagatcccacccccatagtgtttggtcaacagctgatgttg
acagcaggttccgctccagtggctccccagccaggatatccaggaggctatggatacact
gctccaggctaccccacccagccccccctacggctacaacatgtagaccacctctacccc
attcagcccccctacggctacaacatgtag
DBGET
integrated database retrieval system