Oncorhynchus gorbuscha (pink salmon): 124036468
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Entry
124036468 CDS
T07892
Symbol
trmt2a
Name
(RefSeq) tRNA (uracil-5-)-methyltransferase homolog A isoform X1
KO
K15332
tRNA (uracil-5-)-methyltransferase [EC:2.1.1.-]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ogo03016
]
124036468 (trmt2a)
Transfer RNA biogenesis [BR:
ogo03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
124036468 (trmt2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
PCMT
Methyltransf_15
MTS
Ubie_methyltran
Methyltransf_4
Methyltransf_11
RRM_1
Cons_hypoth95
PrmA
N6_N4_Mtase
RRM_PARP14_3
Methyltransf_32
TRM5-TYW2_MTfase
Methyltransf_23
UPF0020
RrnaAD
CMAS
Methyltransf_18
RRM_occluded
RNA_binding
FtsJ
TPMT
AviRa
NodS
Motif
Other DBs
NCBI-GeneID:
124036468
NCBI-ProteinID:
XP_046207042
LinkDB
All DBs
Position
LG05:72816378..72828925
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AA seq
631 aa
AA seq
DB search
MLVLLNMTDVGDIQMVGSPSLNEEKTSDPKEDAVDGVKTDEPKAEGGGEDAASSDPNNLY
RYVQADLFTSEIFKVEIQNLPKFIGFNDLKKFLEKHRLNPHKIKLFGKQTFAFVTFKNEE
ERDKAMKMVHGMQWKGRVLSVRLAKPKADPMLRKRGRDGAGSAGQPPSKRKEAEEDEAPL
SIQIANVVTPLWNVPYEEQLRRKEQEVEGVLQRLAREIGNTNKAMLPWLFVQKEKYKRMC
CPLEEIRPSPSQVEYRNKCEFVIGIGANEEDKTIGFRLGKYKGGSCAVVGPSDSIHVTTE
AKKVVSEFQKFIRTTPYSVYSPETYEGHWKQLTVRTTRTKQAMAMVFFNPQKLEEKELNV
LKSSMKEYFTEGDGKESGVTALYFVSEGQRQSPNPEDLPCELVAGEECIHEELLGLKFRI
SPHSFFQVNTGAAEVLYSAVGEWAQLDKDSTVLDVCCGTGTIGISLAKRVRKVIGIEMCQ
EAVKDAKVNAKINGLSNIEFHCGKAEDVFQMVLNAVVSPSITAIVDPPRAGLHSKVILAI
RRAEHLKRLVYVACNAKAAMNNFIDLCRAPSNRVRGAPFRPVRAMAVDLFPQTMHCEMLL
LFERVDYSSKSSSEKPEEMTQGTSEKPTTTT
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgctcgtgcttttgaacatgacagatgttggtgacatccaaatggtaggttctccatca
ctgaatgaggagaagacatctgaccccaaagaagatgcagtagatggggtgaaaacagat
gaacccaaagctgaaggtggaggagaagatgcagcttcttccgaccccaataatctgtac
cgctacgtccaagcggacctcttcacctctgagatcttcaaagtggagatccagaacctt
cccaaattcatcggtttcaacgacttgaagaagttcctggagaagcatcgccttaaccca
cacaagatcaaactgttcgggaagcagacgtttgccttcgtcacctttaagaacgaagag
gagagggacaaggccatgaagatggtgcacggcatgcagtggaagggccgggtgcttagt
gtgcgcctggccaagcccaaggcggaccctatgctcaggaaaagggggcgggatggggcc
gggagtgccgggcagcccccctccaagcggaaggaggcagaggaggacgaggcgccgctc
agcatacagatcgccaacgtggtgacgcccctgtggaatgtgccttatgaggagcagctg
aggaggaaggagcaggaagtggagggggtgctgcagagactggccagagaaataggcaac
accaataaagcgatgctgccctggctatttgtgcagaaggagaagtacaagagaatgtgt
tgccctctggaagaaattcgcccatctccgtcacaggttgaatacaggaacaagtgtgag
tttgtcattggtattggagcgaatgaagaggataagaccataggcttcagactggggaag
tacaaagggggctcctgtgccgtggtgggaccctcagacagcatccatgtcaccactgag
gccaagaaagtggtcagtgagttccagaaattcatcaggacaaccccatactcagtgtac
agccctgagacatacgagggccactggaagcagctaacggtgcggaccacaaggaccaag
caggccatggctatggtgttctttaacccacagaaacttgaggaaaaagaactaaatgtc
ttgaagagctctatgaaagagtatttcacagagggtgacgggaaagagagtggtgtaact
gctctgtactttgtgtcagagggacaaaggcaatcccctaacccggaggacttgccgtgt
gagctggtagctggagaggagtgtattcacgaggagcttcttggcctgaagttcaggata
tccccccattctttcttccaggtgaacacaggggcagctgaggtgctgtactcagctgta
ggagaatgggcccagctggacaaggacagcactgtgctggacgtatgttgcgggacagga
accattggcatctcactggctaagagggtgaggaaggtgattgggatagagatgtgtcag
gaagcagtgaaggatgccaaagtcaacgcgaagatcaatgggctgagtaatattgagttc
cactgcggaaaggctgaagatgtgttccagatggtgctcaacgctgtcgtatcccccagc
atcaccgccatcgtggacccaccaagagcgggcttacattcaaaggtcattctggcaatc
agaagagcggagcatctgaaaaggctggtttatgtggcatgcaatgccaaggcagccatg
aacaacttcatagatctgtgcagggctccctccaaccgtgtacgtggagctccgttccgt
ccggtgcgggcaatggctgtggacctcttcccccagaccatgcactgtgagatgctgctg
ctctttgagagggtggattacagctccaagagcagcagtgagaaacctgaagaaatgacc
cagggcactagcgagaaaccaaccaccacaacttag
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