Oncorhynchus gorbuscha (pink salmon): 124036591
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Entry
124036591 CDS
T07892
Name
(RefSeq) nuclear receptor ROR-alpha A isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogo03000
]
124036591
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ogo03310
]
124036591
Transcription factors [BR:
ogo03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
124036591
Nuclear receptors [BR:
ogo03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
124036591
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
124036591
NCBI-ProteinID:
XP_046207303
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Position
LG01:35140559..35448003
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AA seq
526 aa
AA seq
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MESPPDPASDPGNSASESATPARETPVNLETLRKAEHPAPVRRQTCSSTNRGGLTNKQGI
SVTKKTHTSQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNAAYSCPRQKNCLI
DRTSRNRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRLQQAQRDHQQQPG
EAEPLTPTYGLSANGLTELHDDLSGYMDGHTPDGSKPDSAVSSFYLDIQPSPDQSGLDIN
GIKPEPICDFAPGSGFFPYCSFTNGETSPTVSMAELEHLAQNISKSHMETCQYLREELQQ
MTWQAFLQEEMESYQTKPREVMWQLCAIKITEAIQYVVEFAKRIDGFMELCQNDQIVLLK
AGSLEVVFVRMCRAFDSQNNTVYFDGKYAGPDVFKSLGCDDLISSVFEFGKNLCSMHLSE
DEIALFSAFVLMSADRSWLQEKVKVEKLQQKIQLALQHVLQKNHREDGILTKLICKVSTL
RALCSRHTEKLTAFKAIYPDIVRAHFPPLYKELFGSDFEQSMPVDG
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atggagtcccctccagatccagcaagcgacccgggcaacagcgcctctgagtcggctaca
ccggccagggaaaccccggtaaacctagagacgctccgaaaagcagaacatccagcccct
gttcgaaggcagacctgttcaagtaccaacagaggtggactcacgaacaagcaaggtatt
tcagtaacaaagaagacacatacctctcaaatcgaaataattccctgcaagatctgtgga
gacaaatcatcaggcatccattacggtgtgataacatgtgagggctgtaagggcttcttc
aggaggagtcagcagagcaatgcggcctactcatgcccccgtcagaagaactgcctgatc
gaccgcaccagccgcaaccgctgccagcactgccggctgcagaaatgtctggcagtgggc
atgtcaagggacgcggtgaagtttgggcgcatgtcgaagaagcagcgggacagcctgtat
gcagaggtgcagaaacaccggctgcagcaggcacagcgtgaccaccagcagcagcccggc
gaggccgagccactcacacccacctacggcctctcggccaatggcctcacagagctccac
gacgacctcagtggctacatggatggccacacccccgacggcagcaagcccgactcagca
gtcagcagcttctacctggacatccagccctcccctgaccagtccggcctggacatcaac
ggcatcaagcccgagcccatctgcgacttcgcccccggctcaggcttcttcccctactgc
tcctttaccaacggagagacatcccccactgtgtccatggctgagctagagcacctggcc
cagaacatctccaagtctcacatggagacgtgtcagtacctgagagaggagctgcagcag
atgacctggcaggccttcctgcaggaggagatggagagctaccagaccaagccccgagag
gtcatgtggcagctgtgtgctatcaaaatcacagaggccatccagtacgtggtggagttt
gccaagcggatcgacggcttcatggagctgtgtcagaacgatcagatagtgctgctgaaa
gcaggctctttggaggttgtgtttgtgagaatgtgccgtgcctttgactctcaaaacaac
acagtctatttcgatggaaagtatgctgggcctgatgtgtttaagtcattaggctgtgac
gacttgatcagctccgtcttcgagtttgggaagaacttgtgttctatgcacctgtctgag
gatgagattgccctgttctccgcgttcgtgttgatgtctgcagaccggtcctggctccag
gagaaggtgaaggtggagaaactccagcagaagatccagctggcactgcagcatgtcctg
cagaagaaccacagagaggacggcatactcaccaagttgatatgcaaggtgtcaacactg
cgagcgctgtgcagcaggcatacagagaagctgacggctttcaaagcaatatacccagac
attgtgcgtgcccacttcccccccttatataaggagctctttggatcggactttgagcag
tccatgcccgttgacgggtag
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