Oncorhynchus gorbuscha (pink salmon): 124036632
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Entry
124036632 CDS
T07892
Symbol
oclnb
Name
(RefSeq) LOW QUALITY PROTEIN: occludin b
KO
K06088
occludin
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03272
Virion - Hepatitis viruses
ogo04382
Cornified envelope formation
ogo04514
Cell adhesion molecule (CAM) interaction
ogo04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
124036632 (oclnb)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
124036632 (oclnb)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
124036632 (oclnb)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
124036632 (oclnb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ogo01009
]
124036632 (oclnb)
Protein phosphatases and associated proteins [BR:
ogo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
124036632 (oclnb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Occludin_ELL
MARVEL
WLS-like_TM
DUF2070
Anthrone_oxy
DUF7937
TgpA_N
Peptidase_M56
DUF2381
Oxidored_q3
Wzy_C_2
Motif
Other DBs
NCBI-GeneID:
124036632
NCBI-ProteinID:
XP_046207406
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All DBs
Position
LG05:87548754..87571913
Genome browser
AA seq
469 aa
AA seq
DB search
MPSHNKRTSPSYHPGSRRHEHRHKHSEHVSNPAYSFYPEEELLHFYRWTSPPGVMKIISI
IIIIXVAIFACVASTLAWDYDMSMMGMSGGIGGGMGIGGGGYGGSYNGGRSYSCVPSPEN
QREPETPWQGFIIAIAAITFIAVLIIFILVVSRRNASRSPKFYLGAIIVSAILAILMIIA
TIVYLVAVNPTAQSSGSVYYNQIIQLCSQYQNQNQAQGIFINQYLYHYCVVEPQEVIAII
LGILVFVGLIILLVFAVKTRQKIRRWGPDRILWEETKVISNSLRTHTIGEWVNNVSGQPD
TLVNEYNDKVGGSRNFLDQLPDHRPLYLPGSSDITSSLGGLKSKLRDYDTGAESGGEDLD
EIDFNSEFSAIMNEQERLDYKREFDRDHLEYKELQAELDDLNMGLADLDKELDRQPEGSP
QFLDAMDKYTRMKNMKKSSDYQLKKKRCKHLKAKLSHIKRKVSEYDRRP
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgccctctcacaacaaacgcacctctccttcctaccatcccggcagcagacgccatgaa
cacaggcacaagcatagcgagcatgtctccaacccagcctactctttctacccagaggag
gagctcctccacttctaccgctggacctctcctccgggggtgatgaagatcatctccatc
atcatcatcatcnatgtagcgatcttcgcctgcgtggcgtctacgctcgcctgggactac
gacatgagcatgatgggaatgagcgggggcatcggaggcgggatgggcatcggcggcgga
ggatacggtgggagctacaacggtggcagatcatacagctgtgttcccagtccggagaat
cagcgggaaccagagaccccctggcagggcttcatcattgccatagcagccatcaccttc
atcgccgtgctcatcatcttcatcctagtggtgtcgcggcggaacgcgtcccgctcgcca
aagttctacctgggggccatcatcgtgtcggccatcttggcgatactaatgatcatcgct
actatagtctacctggtggcagtgaaccccacagcccagtcctcagggtccgtctactac
aaccagatcatacagctgtgttcccagtaccagaatcagaaccaagcccagggcatcttc
atcaaccagtacctctaccattactgcgtggtggaacctcaggaggtcatagccatcatc
ctgggaatcttggtattcgtgggtctgatcatcctgctggtgtttgctgtgaagacgcgt
cagaagatcagacgttggggcccagacagaatcctctgggaggagaccaaggttatcagc
aacagcctgcgcacacacaccatcggagagtgggtgaataacgtgtctggtcagccggac
actctggtgaatgaatacaatgacaaggtggggggctccaggaacttcctggaccagctg
ccagaccacagacctctgtatctgcctgggagctcagacataacaagttcgttgggagga
ctgaagagcaagctgagggactacgacactggtgcagaatcaggaggagaggatctggac
gagatcgactttaactccgagttctctgccatcatgaatgagcaggagcgtctggactac
aagagggagtttgaccgggaccatcttgagtacaaagagctgcaggctgagctggatgac
ctcaacatgggcctggctgacctggacaaggaactggacagacaaccagagggcagccca
cagttcctggatgctatggataagtacacccggatgaagaatatgaagaagtcctcagac
tatcagctgaagaagaagaggtgcaagcatctgaaggccaagctgtctcacatcaagagg
aaggtcagcgagtatgaccgcagaccctga
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