Oncorhynchus gorbuscha (pink salmon): 124036682
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Entry
124036682 CDS
T07892
Symbol
ppil2
Name
(RefSeq) RING-type E3 ubiquitin-protein ligase PPIL2
KO
K10598
peptidyl-prolyl cis-trans isomerase-like 2 [EC:
5.2.1.8
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124036682 (ppil2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ogo03041
]
124036682 (ppil2)
03110 Chaperones and folding catalysts [BR:
ogo03110
]
124036682 (ppil2)
04121 Ubiquitin system [BR:
ogo04121
]
124036682 (ppil2)
Enzymes [BR:
ogo01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
124036682 (ppil2)
Spliceosome [BR:
ogo03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
124036682 (ppil2)
Complex C
U4/U6.U5 tri-SnRNP related factors
124036682 (ppil2)
Other splicing related proteins
Minor spliceosome components
Minor spliceosome associated proteins
124036682 (ppil2)
Chaperones and folding catalysts [BR:
ogo03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
124036682 (ppil2)
Ubiquitin system [BR:
ogo04121
]
Ubiquitin ligases (E3)
U-box type E3
124036682 (ppil2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Rtf2
zf-NOSIP
U-box
V-set_CD47
Motif
Other DBs
NCBI-GeneID:
124036682
NCBI-ProteinID:
XP_046207485
LinkDB
All DBs
Position
LG05:95738543..95776970
Genome browser
AA seq
525 aa
AA seq
DB search
MGKRQHQKDKMYITCAEYTHFYGGKRSEIPKSNFRRLPFDHCSLSLQPFEYPMCTPEGIV
FDLLSIVPWIKKFGTNPISGEKLEAKSLIKLNFAKNNDGKYHCPVLYTVFTNNSHIVTNK
LTGNVFSHEAVEQLNVKTKSYRDLLSDEPFTRQDIITLQDPTNLDKFNVSDFFHVKNNLK
VLDPDEEKAKLDPGYHLNSTNMETRETLAELYKDYKGDALLASTMKEPQAKKTDKLNAAH
YSTGRVSASFTSTAMTPATEHTADAISDDTVRYSYVKKKGYVRLHTNKGDINLELYCDKV
PKAGENFTKLCKKGYYDGTVFHRSIRNFMIQGGDPTGTGLGGESFWGKPFKDEFRPNLSH
TGRGVLSMANSGPNTNKSQFFITFRSCPYLDRKHTVFGRVVGGFEALTAMENIEADPKSD
KPKSEIKLLSATVFVDPYEEADAQIAAERQKEFEQQEEARAQTSLSQRKTKAEQAPKTFK
AGIGKYINPVTSTTTKRPAVEDSGPSTSAAKKPKGKTGFGDFSSW
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggggaagcgtcaacatcagaaggataaaatgtacatcacatgtgctgagtacacccat
ttctatggagggaaaagatcagaaattccaaagtcaaattttcgacgtcttccatttgac
cattgcagcttgtctctgcagccgtttgaatatcccatgtgcactcccgagggaatcgtc
tttgacctgctgagcatcgttccttggataaagaagtttggcaccaatcccatctctgga
gagaaattggaagcgaagtccctcatcaagctgaacttcgccaagaacaacgatggtaaa
taccactgtcccgtcctgtacacagtcttcacaaacaactcccatatcgtcaccaacaag
ctcactggcaatgtgttctctcacgaggctgtggaacagctcaacgtcaagacgaagagt
tacagagacctgctctctgatgaacctttcaccagacaggacatcatcaccctgcaggat
ccaaccaacctggataagttcaacgtctcggacttcttccacgtcaagaacaacctcaaa
gtactggaccctgatgaggagaaggctaagctggaccctggttaccacctgaacagtacg
aacatggagaccagagagaccctggctgagctctataaggattataaaggagacgctcta
ctggcctccaccatgaaggaaccacaggccaagaagacagacaaacttaatgcggctcat
tactctactggcagagtgtctgcttccttcacctccacagccatgacccctgctaccgaa
cacactgcggatgccatctcagacgacacggtgcgttattcctatgtgaagaagaaaggc
tatgttcgcctccacaccaacaagggagacatcaacctggagctgtactgtgacaaggtt
cctaaagcaggagagaacttcaccaagctctgtaagaagggttactacgacggaactgtc
ttccacagatctatcaggaacttcatgatccaaggaggagacccaactgggactggttta
ggtggagagtcattctggggtaagcccttcaaagatgagtttcgtcccaacctgtcccac
accggacgaggggttctcagcatggccaactcaggacccaacaccaacaagtcccagttc
ttcatcaccttccggtcatgtccctacctggacaggaaacataccgtgtttggaagggtg
gtgggaggcttcgaggctctgacagccatggagaacatagaagctgatcctaaatccgat
aaacccaagtctgagatcaagctgctgagtgccactgtgttcgtggacccatatgaagag
gcagatgcccagattgcagcggagcgtcagaaggagtttgagcagcaggaggaggctcga
gctcagaccagtttgtctcagaggaagacgaaagcagagcaggctcccaagaccttcaag
gctggcatagggaaatacatcaaccctgtgacctctaccaccacgaaacgtccagcagta
gaggacagcggaccgtcaaccagcgcagccaagaagcccaaaggaaagactggctttgga
gacttcagctcctggtaa
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