Oncorhynchus gorbuscha (pink salmon): 124036968
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Entry
124036968 CDS
T07892
Symbol
ddb2
Name
(RefSeq) DNA damage-binding protein 2
KO
K10140
DNA damage-binding protein 2
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03420
Nucleotide excision repair
ogo04115
p53 signaling pathway
ogo04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124036968 (ddb2)
09124 Replication and repair
03420 Nucleotide excision repair
124036968 (ddb2)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
124036968 (ddb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ogo04121
]
124036968 (ddb2)
03400 DNA repair and recombination proteins [BR:
ogo03400
]
124036968 (ddb2)
Ubiquitin system [BR:
ogo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
124036968 (ddb2)
DNA repair and recombination proteins [BR:
ogo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
124036968 (ddb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
WD40
Beta-prop_EML_2
WDR55
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_EIPR1
WD40_RFWD3
EIF3I
Beta-prop_TEP1_C
Beta-prop_WDR19_1st
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_Vps41
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
124036968
NCBI-ProteinID:
XP_046207537
LinkDB
All DBs
Position
LG06:complement(3691685..3715348)
Genome browser
AA seq
503 aa
AA seq
DB search
MARAKKGPSEASESKQKSRRQNGETSGAAGQTISTKLRQKKDGTNTLKTGPVFPTTMIRT
SVGKRSGPGSILHYIYQSTLGQSLHSQMRQCLQEPFVRSLSSYKLHRTASPFDRRVTCLE
WHPSHPTTLAVGSKGGDVVLWDYNVLNKTSFIQGKGAGDFIGGMTFSLTDPSKVYLASGD
GTLTEQSFQGGPGTVLSRVQDCGHDHHNVCLWYCCVDVSLSRQMLVTGDNIGRVLLLGMD
GHQVFNGKLHKAKVTHAEFNPRCDWLMATASVDHTVKLWDLRNIKDKDTYLHEMVHDKAV
NSAYFNPVDCSKLLTTDQYDQIRVYSSSDWSTPQQIIQHPHRQFQHLTPIKATWHPLYDL
MVVGRYPDERVCPGALRTIDIYDANTGELACQLLDPNAPGIISVNKFNPMGDVLGSGMGV
NILVWNREETLAGKQQRGELQQEAGVQVGRGRGQWRRRGETRRGGGTGGRGGEDEDDIGK
LKKKLSSSLGTRTRTARDTEGSK
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggcacgggcaaagaagggtccttcagaagcatctgaatcgaagcagaagtcgaggagg
cagaatggagaaacgtctggggctgcaggacaaaccatctccacgaagcttcggcagaag
aaggacgggacgaacacattgaaaacagggcctgttttcccaaccaccatgatcaggact
tcagttgggaagagaagtggaccaggaagcatcctgcactacatttaccagagtacactg
gggcagagccttcattctcagatgagacagtgtctccaggagccgtttgtacgttccctg
tcctcctataagctccaccgtacagccagtccgtttgaccggcgggttacctgtctggag
tggcacccctcgcaccccaccacgctggcggtcggctccaagggaggagacgtggtcctc
tgggactacaacgtgctcaacaagaccagcttcatacaagggaaaggagccggggatttt
attggtgggatgacgtttagcctgacggacccgtccaaggtctacctggcgtctggcgac
ggtacgctgaccgagcagagctttcagggcggtccaggaacggttctgtccagagtccag
gactgtggacacgatcaccacaatgtctgtctgtggtactgctgtgtagatgtgtcgttg
agcagacagatgttggtgacaggagacaacattggacgagtcttattgctgggcatggat
ggacaccaggtcttcaacgggaagctgcacaaagcaaaagtgacccatgctgaattcaac
cctcgctgcgattggttaatggcgacagcgtccgttgaccacacggtgaagctatgggat
ctgaggaacatcaaggacaaggacacttacctccacgagatggttcatgacaaagctgtt
aactcagcctactttaatccagtggactgctccaagctcctgaccacggaccagtatgac
cagatcagggtgtactcctcttctgattggtcaactcctcagcagattatccagcaccca
cacagacagtttcagcacctcacaccaatcaaggccacgtggcaccctctgtacgacctg
atggtggttggacggtaccctgacgagagggtgtgtccaggtgccctgaggaccatcgat
atctatgatgccaacacaggagagctggcatgccaactactggaccccaacgcccctggc
atcatatctgtcaacaagttcaatccaatgggagatgttttaggatctgggatgggtgtg
aacatcctagtgtggaacagagaggagacattggctggtaagcagcagagaggagagcta
caacaggaagcaggagtccaggttggcagaggtcgaggccagtggaggagaagaggggag
actcggagggggggagggacggggggacgggggggagaggatgaggacgacattgggaag
ctgaagaagaagctgtcttcgtccttgggtaccagaaccagaacagccagggacacagaa
gggtccaaataa
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