Oncorhynchus gorbuscha (pink salmon): 124037151
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Entry
124037151 CDS
T07892
Name
(RefSeq) pre-mRNA-splicing factor 38A-like
KO
K12849
pre-mRNA-splicing factor 38A
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124037151
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ogo03041
]
124037151
Spliceosome [BR:
ogo03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
124037151
Complex C
U4/U6.U5 tri-SnRNP related factors
124037151
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Wap1
Motif
Other DBs
NCBI-GeneID:
124037151
NCBI-ProteinID:
XP_046207769
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All DBs
Position
LG06:complement(45208618..45212025)
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AA seq
308 aa
AA seq
DB search
MANRTVKDANSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMALKFVGGV
YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRLLGAMYMRLTGTSVDCYKYL
EPLYNDYRKIKSQNRNGEFELQHVDEFIDELLHSERMCDIILPRLQKRQVLEEAELLDTR
ISALEEDLDEVETSEEEDEEEEKTERVQTPEPHRRSYRDNDRPRRSPSPRYRRSSRSPRR
RSRSPKRRSPSPRRERHRSKSPRRHRSRERRHRSKSPGHHRSHRHRSHSKTPERSSKKSH
KKSRRGNV
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacaggacggttaaagatgccaacagtatacatggaacaaatccacaatacttg
gtagagaaaattattcgtactcgaatctatgaatcaaaatactggaaagaagaatgcttt
ggactgacggctgagcttgtcgttgacaaagccatggcgctgaagtttgtcggtggagtt
tatggcggaaatatcaaaccgacaccgttcctgtgtctcactctgaagatgctgcagatc
cagccagagaaagacatcattgtagaatttatcaaaaacgaggatttcaaatatgtccgc
ttgcttggcgccatgtacatgaggttgactgggacatcagtggattgctacaaatacctg
gaaccactgtacaacgactacagaaaaatcaagagtcagaaccgaaatggggagtttgag
ctgcaacacgtcgatgagtttattgatgaactgctacactctgagagaatgtgtgacata
atccttcccaggcttcagaaaaggcaggttcttgaggaggcggagctgttagacacgcgc
atcagtgccctggaagaagacctggatgaggtggagaccagcgaagaggaagatgaggag
gaggagaagacagagagagttcagaccccagagccccacagacggagttaccgagacaac
gatcggcctcgccgctcgccctctccacgctacagacgcagcagtcgttcacccagacgg
aggagcagatcacctaagagacgaagcccatcccccaggcgagaacgtcaccgcagcaaa
agcccccgtcgccaccgctcccgagagagacgtcaccgctcgaagtccccagggcatcac
agaagccacaggcatcgcagtcactccaaaaccccagagaggagttcaaaaaagagccac
aagaagagtcgaagaggaaacgtgtga
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